Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04921 and BL00747
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:06
# Commandline: needle
# -asequence dna-align/BSNT_04921___gerAA.1.5803.seq
# -bsequence dna-align/BL00747___gerAA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04921___gerAA-BL00747___gerAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04921___gerAA-BL00747___gerAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04921___gerAA
# 2: BL00747___gerAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1528
# Identity: 1015/1528 (66.4%)
# Similarity: 1015/1528 (66.4%)
# Gaps: 164/1528 (10.7%)
# Score: 3255.0
#
#
#=======================================
BSNT_04921___ 1 TTGGAACAAACAGAGTTTAAGGAATATATACACGATAATTTAGCATTGGT 50
.||...|||.|.||.||.||||||.|.||.||.||.|||.|.|||.||.|
BL00747___ger 1 ATGACTCAATCGGAATTCAAGGAACACATCCATGAAAATCTCGCAATGCT 50
BSNT_04921___ 51 GCTGCCAAAATTAAAAGAAAACGATGATCTGGTGAAAAACAAAAAAATGC 100
.||.||..|..|..|..|.||||||||||||.|..||||.||||||||||
BL00747___ger 51 CCTTCCCCATCTCGAGCATAACGATGATCTGATTCAAAATAAAAAAATGC 100
BSNT_04921___ 101 TTGCGAACGGACTGGTTTTTTACTATCTCTATTTCAGTGAACTGACTGAT 150
|....||||||.|..|||||||||.|.|.||.||.|..||..|||.||||
BL00747___ger 101 TGAAAAACGGAATCATTTTTTACTTTTTGTACTTTAAAGATTTGAATGAT 150
BSNT_04921___ 151 GAGAATAAGGTGTCAGAAG--------------------CCATTAAAACT 180
||.||.||..| .|||||| |.||.|.|.||
BL00747___ger 151 GACAAGAAAAT-CCAGAAGGCTGCGAAATTGCTTGTCTCCGATGACAGCT 199
BSNT_04921___ 181 ----TTAATTAAAGATGAGGAGACCTTAACGCTTGACCAGGTCAAAAAAC 226
||.||| .||||| ||.||.|.|| |
BL00747___ger 200 CCTATTCATT-----GGAGGA------------TGTCCGGCTC------C 226
BSNT_04921___ 227 GCCTTGACCAGCTTGACGCAAGACCTGTTGAAACCGCAAAAA---AAACG 273
||.|..||.||||..|.||...|||.||| ||.||||||| |..||
BL00747___ger 227 GCTTAAACAAGCTGAATGCGGAACCCGTT---ACAGCAAAAAAGGACGCG 273
BSNT_04921___ 274 ATTGAATCGATTCTCAACGGCAATTGTGCTG-TGTTTATCAACGGATTGG 322
|||.|..|.||..||||.||.||.||| ||| ||||.||||||||.|||.
BL00747___ger 274 ATTAACGCAATCTTCAAAGGAAAATGT-CTGCTGTTGATCAACGGTTTGA 322
BSNT_04921___ 323 ATAAAGCCTATATT----CTGACCACAGGAAAGAAAAAAACAAGAAGCCT 368
||| ||.|||| |||.|.||||...|||||||.|.|||||||||
BL00747___ger 323 ATA----CTGTATTTGCACTGCCGACAGCTGAGAAAAAGAAAAGAAGCCT 368
BSNT_04921___ 369 GACAGAGCCGACAACTGAAATAGTGGTTCGCGGCCCAAAAGTAGCGTTTG 418
...|||...||..||.||||..||.||..|.|||||.|||||.|..|||.
BL00747___ger 369 TGGAGAAGTGAATACAGAAAACGTCGTCAGAGGCCCGAAAGTCGGTTTTA 418
BSNT_04921___ 419 TAGAGGATATCGATACAAATCTCGCTCTGATTA--------------GAC 454
|.||||||.|||||||||||.|.|||||..|.| ||.
BL00747___ger 419 TCGAGGATGTCGATACAAATGTGGCTCTAGTCAGGCAGCGTGTCCCGGAT 468
BSNT_04921___ 455 AAAGAACCTCTCATCCGAAATTGATCACCAAAAAAATCATGATCGGCGAA 504
||||||| |||.|....||||||||..|.|||||.|.
BL00747___ger 469 AAAGAAC--------------TGACCGTGGAAAAAATCCCGCTCGGCAAG 504
BSNT_04921___ 505 AACAAGCTGAAGCCCGCAGCCATTATGTACATTGAAGGCAAAGCAAAAAA 554
|.||||.|.||...|||..|||||.|.||.||..|.||||||||..|..|
BL00747___ger 505 AGCAAGTTTAAAGACGCGACCATTCTCTATATCCAGGGCAAAGCGGACGA 554
BSNT_04921___ 555 GTCCGTCATAAAAGAAGTGAAGGCGCGGCTTAAAAATATCCAGCTGGAAG 604
.||..||||.|||||..|.||...|||.||.|||||..|.||||||||.|
BL00747___ger 555 TTCGATCATCAAAGATCTTAAAAAGCGCCTGAAAAAAGTTCAGCTGGATG 604
BSNT_04921___ 605 ATATCCAGGACAGCGGAACG--CTCGAGGAACTCATTGAAGATAATAAAT 652
||||.||.||.|.||| || ||.||.|||.|.||.|||||||||||.|
BL00747___ger 605 ATATTCAAGATACCGG--CGTTCTTGAAGAATTAATCGAAGATAATAAGT 652
BSNT_04921___ 653 ATTCACCATTTCCGCAGATTCAAAATACGGAAAGACCTGACAAAGTATCT 702
|.||.||.|||||||||||.||.|||||.||||||||||||||.||.|||
BL00747___ger 653 ACTCGCCGTTTCCGCAGATCCAGAATACCGAAAGACCTGACAAGGTTTCT 702
BSNT_04921___ 703 TCAGCCCTGTTTAACGGCCGTGTGGCAATTTTGGTCGATGGTTCACCATT 752
|||||.||||||||.||.||..|.||||||||.||.|||...||.|||||
BL00747___ger 703 TCAGCGCTGTTTAATGGACGGATCGCAATTTTTGTTGATTACTCGCCATT 752
BSNT_04921___ 753 TGTGCTGCTGGTGCCGGTTTCTCTCGGCATCCTGATGCAATCCCCGGATG 802
||..|||.|.|||||||.||||.||||.||..|||||||.||||||||.|
BL00747___ger 753 TGCCCTGATCGTGCCGGCTTCTTTCGGAATGGTGATGCAGTCCCCGGACG 802
BSNT_04921___ 803 ACTACTATGAACGCTGGAT-------------TTCAGCATCTCTTATCCG 839
|.|..||.|||.|.||||| .|||| ||.|||| ||
BL00747___ger 803 ATTTTTACGAAAGATGGATCGCCACGACCTTGATCAG-ATTTCTT---CG 848
BSNT_04921___ 840 GTCGCTGCGCTATGCTTCTATCTTTATCACCTTGTTTTTGTCATCGATTT 889
|| |..| |||.||.||.||||||.||||..|.||..||.|||
BL00747___ger 849 GT--------TCAG-TTCGATTTTCATCACCCTGTTCCTATCGGCGTTTT 889
BSNT_04921___ 890 ATATAGCACTTGTTTCCTTCCATCAGGGGCTGCTGCCGACCGCGCTCGCC 939
||||..|.|||||.||.||.|||||.||..||||||||||.||.|||||.
BL00747___ger 890 ATATTTCGCTTGTATCTTTTCATCAAGGCATGCTGCCGACGGCTCTCGCT 939
BSNT_04921___ 940 GTTACAATTTCGGCGAACA---GGGAAAACGTGCCGTTCCCTCCGATATT 986
|||||.||| ||||.|| |.|||||.||||||||.||.|||.|..|
BL00747___ger 940 GTTACGATT---GCGAGCACGCGCGAAAATGTGCCGTTTCCGCCGCTCCT 986
BSNT_04921___ 987 TGAAGCCCTGCTGATGGAAGTCACCATCGAGCTGCTAAGGGAAGCCGGAC 1036
||||||.|||.|.||||||||.||.||||||||..||.|||||||.||||
BL00747___ger 987 TGAAGCGCTGATTATGGAAGTGACGATCGAGCTCTTACGGGAAGCGGGAC 1036
BSNT_04921___ 1037 TGCGACTCCCCAATCCGCTCGGACAGACGATCGGCCTCGTTGGGGGCGTA 1086
||||.||.|||||||||||.||.|||||||||||||||||.||.|||||.
BL00747___ger 1037 TGCGGCTTCCCAATCCGCTAGGCCAGACGATCGGCCTCGTGGGAGGCGTC 1086
BSNT_04921___ 1087 GTCATCGGACAGGCTGCTGTAGAAGCGAATCTCGTCAGTTCGATTATGGT 1136
||||||||.|||||.||.||.|||||.|||.|||||||.||..|.|||||
BL00747___ger 1087 GTCATCGGCCAGGCGGCGGTCGAAGCAAATATCGTCAGCTCTGTGATGGT 1136
BSNT_04921___ 1137 CATTGTCGTCAGTGTCATTGCCCTGGCATCCTTTACCGTTCCTCAATACG 1186
.||..|||||||..|.||.|||||.||.||.|||||.||.||.||.||||
BL00747___ger 1137 GATCATCGTCAGCATTATCGCCCTTGCTTCATTTACTGTGCCGCAGTACG 1186
BSNT_04921___ 1187 GAATGGGTCTGTCTTTCCGGGTGCTGCGTTTTATTTCGATGTTTTCCGCC 1236
|.|||||.|||||.||.||.|||||.|||||||||||.|||.|..|.||.
BL00747___ger 1187 GCATGGGCCTGTCGTTTCGCGTGCTTCGTTTTATTTCCATGGTGGCTGCA 1236
BSNT_04921___ 1237 GCTATTTTAGGGCTGTACGGCATTATTTTATTTATGCTTGTCGTTTATAC 1286
||..|.||.|||||.|||||.||.||.||.|..|||||.|.|.|.|..||
BL00747___ger 1237 GCCGTGTTCGGGCTTTACGGGATCATATTGTGCATGCTCGCCATCTTCAC 1286
BSNT_04921___ 1287 GCACTTAACGAGACAAACGAGCTTTGG-GTCTCCGTATTTTTCGCCAAAC 1335
.||.||..|.||.||||..|||||.|| .|| |||||||||...||.|||
BL00747___ger 1287 CCATTTGGCTAGGCAAAGAAGCTTCGGCATC-CCGTATTTTAACCCGAAC 1335
BSNT_04921___ 1336 GGATTCTTT-AGCCTGAAAAATACGGATGACTCCATTATCCGTCTCCCAA 1384
.|||.||| |||.|.|||.||||||||||..|||||||.|||||.||||
BL00747___ger 1336 -CATTTTTTCAGCTTAAAACATACGGATGAAGCCATTATTCGTCTGCCAA 1384
BSNT_04921___ 1385 TTAAAAACAAACCAAAA------GAGGCGAA---TAATCCAAAT-GAGCC 1424
||||| ||||.||| ||| |||| ||.||
BL00747___ger 1385 ------------CAAAAGCTCGGGAGGTGAACCGTAA---AAATGGATCC 1419
BSNT_04921___ 1425 AAAAA--CAGACTCCA-CTGAAACTTAA 1449
||||| ||| |.|.| |.|| |||.
BL00747___ger 1420 AAAAAATCAG-CACGATCGGA---TTAG 1443
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