Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04923 and BL00745
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:06
# Commandline: needle
# -asequence dna-align/BSNT_04923___gerAC.1.5803.seq
# -bsequence dna-align/BL00745___gerAC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04923___gerAC-BL00745___gerAC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04923___gerAC-BL00745___gerAC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04923___gerAC
# 2: BL00745___gerAC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1257
# Identity: 710/1257 (56.5%)
# Similarity: 710/1257 (56.5%)
# Gaps: 276/1257 (22.0%)
# Score: 1657.5
#
#
#=======================================
BSNT_04923___ 1 ATG--AAAATCCGGATTTTATGTATGTTTATATGCA-CCCTATTGCTG-- 45
||| ||||...||| ||||| .||| ||||.|..|||
BL00745___ger 1 ATGAAAAAAAAGGGA--------ATGTT----AGCAGCCCTTTCTCTGCT 38
BSNT_04923___ 46 --TCC--------GGATGCTGGGACAGTGAGAATATCGAGGAATTAAGCT 85
||| ||.|||||||||||...|.|.||||| .|||||
BL00745___ger 39 TCTCCTTTTAACAGGCTGCTGGGACAGCAGGCAGATCGA-----AAAGCT 83
BSNT_04923___ 86 TAGTGATCGGAGTAGGGCTAGAC-------AAGCC--TGACGATGAAAAT 126
||| .||||...|.||.||.|.| |||.| .||||||.||||.
BL00745___ger 84 TAG-CATCGCCATCGGCCTTGCCCTCGATAAAGGCGAGGACGATAAAAAC 132
BSNT_04923___ 127 TTAGAGCTGACACAGCAAATTCTCGTGCCGAAAAAAATCAG------CG- 169
.|..|..||||..|.||..||||.||.||.|||||.|||.| ||
BL00745___ger 133 GTGAAATTGACGTATCAGTTTCTTGTTCCTAAAAAGATCGGACAAGACGG 182
BSNT_04923___ 170 -AGGGCTCTTCATCTGATCCGACACAGCTTTCTATCACAAAG-GGTG--- 214
||.|||| ..|||||| ||| |||| ||||
BL00745___ger 183 CAGCGCTC-----AGGATCCG---------TCT-----AAAGTGGTGTCC 213
BSNT_04923___ 215 ----------AAACTGTCCATCAAATGATGAGAACCTCTGCATTAAAGCA 254
|.||.||||||||||..||..|..||.|.||.||.||..|
BL00745___ger 214 ACCTCCGGAAACACGGTCCATCAAACCATCCGTTCCACCGCTTTGAAAAA 263
BSNT_04923___ 255 TAATCCTACG---TTTTTACAGCATTTGC--GTCTCATTCTGCTTTCCAA 299
| .||| || ||.|..||||||.||| ||| |||.|||.|..
BL00745___ger 264 T-TTCC--CGGTATTCTCGCAGCATCTGCAAGTC-----CTGATTTTCTC 305
BSNT_04923___ 300 AAACGTGATTG---CGGATCAAATC---GGAACGGATGCCATT-ATTAAC 342
|.|.|.|.||| |.||| |..|| |||| .|||| ||.||.
BL00745___ger 306 AGAGGAGCTTGTATCCGAT-ATTTCTCTGGAA------GCATTGATCAAT 348
BSNT_04923___ 343 CAGTTTGTCAGAGACAACGGAACAAGGAGGAGTTCCTACGTCTTTATCAC 392
||.|||.|.||.||||||.|.|..||.|||||...|.|.||||.|||.||
BL00745___ger 349 CAATTTATTAGGGACAACAGCATCAGAAGGAGCAGCGAGGTCTATATGAC 398
BSNT_04923___ 393 -----CAACGGCCGAACTAAGGATATATTTAACATGAA---TGATG---- 430
.|.|.||||| .||.||| .|||| |||||
BL00745___ger 399 GCCCGGAGCTGCCGA---CAGCATA--------CTGAAGGTTGATGGTGC 437
BSNT_04923___ 431 AAGACGAACCCGCATCCAACGTGAT--ATATGATCT-----GACAGAGAA 473
||| .||.||.||.|||.||||||| |.|..|||| .||||||..
BL00745___ger 438 AAG-TGACCCTGCGTCCGACGTGATCCACAGCATCTCTGAAAACAGAGCT 486
BSNT_04923___ 474 TAATAAGGTGACGATCAGAATGATGGAGCCAGTTACATTGGGGGAGATCT 523
| .||||||||...||.|..||||.||.||||||...||.||.|
BL00745___ger 487 T-------CGACGATCAAGCTGCTCAAGCCCGTCACATTGAACGATATTT 529
BSNT_04923___ 524 CAGAACACTTAACCT-CTGAC-GATTCATTCCTCATCCCTCATGTCGGTA 571
| || ||||..| |.|.| ||||.|| ||.|| .|||||.|| |
BL00745___ger 530 C-GA----TTAAAATGCAGTCTGATTTAT--CTTAT--ATCATGCCG--A 568
BSNT_04923___ 572 AG---------GAAAACGGAAAGCT----CGCGATAAACGGAGCCTCTAT 608
|| |||||.|||.|||| |..|| |..|||.||| .|
BL00745___ger 569 AGGTTGTGATCGAAAAAGGACAGCTTCAGCTTGA-AGGCGGCGCC---GT 614
BSNT_04923___ 609 CATCAAAAATAAATTATGGCACGGAGA----------TCTCACCCCGATT 648
.||||||||.||...||..||.|.|.| ||||| |||.
BL00745___ger 615 GATCAAAAACAACAAATACCATGCAAACCTTTCGCCGTCTCA----GATC 660
BSNT_04923___ 649 GAGGTTCAAAATATCAACTTATTTTCAGGCAATGTCGAGGGAGGCGTCAT 698
||.|..| |.||.|||||..|.|||||||||...||.||.||.||
BL00745___ger 661 GAAGCGC------TGAATTTATTAACTGGCAATGTCATCGGCGGAGTGAT 704
BSNT_04923___ 699 TGACTTGAAGCGCGATGGCCATCTCTTTTCTTATAAAGTATATTCAAGCA 748
.||||..|.||..|||||.|||.|.||.||.|||.||||.|.|||
BL00745___ger 705 CGACTCAAGGCATGATGGACATTTGTTCTCGTATGAAGTGTTTTC----- 749
BSNT_04923___ 749 ATCGGAAGATCAA------GACGGCCTATAAGG----ACGGAAAGTTCAA 788
||.||.|.| | |||.|.||.||| |||||||||.|||
BL00745___ger 750 ----GATGACCCACCGCGTG-CGGGCGATGAGGCAGAACGGAAAGTACAA 794
BSNT_04923___ 789 ATTCACCGTCACCCGCACTATTGAAGGTCGTCTATCTGAGGACTGGAATC 838
||||..|||.|....||.||||.||||..|.||.||.|||||||||.|||
BL00745___ger 795 ATTCGTCGTAAATGCCAATATTAAAGGAAGGCTGTCAGAGGACTGGTATC 844
BSNT_04923___ 839 CTAGTGAAGATTCGTTTAAGGATTCATATATTAAAAGCATTGAAAAGACA 888
.|.|.||.|||||.|||||.||...||||||.||||.|||.||.||..|.
BL00745___ger 845 TTGGAGAGGATTCTTTTAATGACCAATATATAAAAAACATAGAGAAATCG 894
BSNT_04923___ 889 GTCGAAAAACAAGTACACAAAAC------AGTAAC-GA--CATTTATTAC 929
||..|||||.|..| ||.|||.| ||.|.| || |||.|
BL00745___ger 895 GTTCAAAAAGACAT-CAAAAAGCGGGTTGAGCAGCTGATCCATGT----- 938
BSNT_04923___ 930 AGAGAAACTGCAGAAAGAGATCAAAGCGGATGTGACCGGATT-----GGG 974
.||||||.|.||.||||||.||||.||.||| |||| |
BL00745___ger 939 ------CCTGCAGCACGATATCAAAACGGACGTCACC-GATTTTTCCG-- 979
BSNT_04923___ 975 AAACCAAGTCAGAATTCATTATCCTCAAAAGT-GGAAAAAGATCTCAAGA 1023
||.|.|...|.||..|||.|||..|..||| ||||||||| .|||
BL00745___ger 980 --ACAATGCGCGGATCAATTTTCCGAAGGAGTGGGAAAAAGA----CAGA 1023
BSNT_04923___ 1024 ---AAATGGGATGATGATTATTTCAGCAATGCGGAAATAGACTACCGGGT 1070
||.||| ||..|..|.||||||.|.||..|.||.|||||.|...|
BL00745___ger 1024 TTCAATTGG---GACAAACACTTCAGCGAAGCCTATATCGACTATCATAT 1070
BSNT_04923___ 1071 CAATG---TGATTGTCAGAGACTTCGGAACGAAAGGCGCAAACAAATAA- 1116
.||.| .||| |||| |||||.|||||.|||||.|| .||||| ||
BL00745___ger 1071 TAAAGCGACGAT--TCAG-GACTTTGGAACAAAAGGTGC-GACAAA-AAG 1115
BSNT_04923___ 1116 ------- 1116
BL00745___ger 1116 CAGATAG 1122
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