Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04975 and BL00739
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence dna-align/BSNT_04975___yvsG.1.5803.seq
# -bsequence dna-align/BL00739___yvsG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04975___yvsG-BL00739___yvsG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04975___yvsG-BL00739___yvsG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04975___yvsG
# 2: BL00739___yvsG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 505
# Identity: 340/505 (67.3%)
# Similarity: 340/505 (67.3%)
# Gaps: 56/505 (11.1%)
# Score: 1134.0
#
#
#=======================================
BSNT_04975___ 1 ATGACAGGAAAAACACACATCATGGGAGGCATCGCTTCTTGTACGGCAGC 50
|||||||||||||||||||||||||||||..||||||||||||||||.||
BL00739___yvs 1 ATGACAGGAAAAACACACATCATGGGAGGGGTCGCTTCTTGTACGGCTGC 50
BSNT_04975___ 51 GGCTTATTATTATGGATTTGATCCAGTGCTTATGGCTGCGTCAGGCGCGG 100
.|||||||.|||.||||.||||||.|||.|.|||.|.||.||.||||...
BL00739___yvs 51 TGCTTATTTTTACGGATATGATCCGGTGTTCATGACAGCCTCGGGCGTTA 100
BSNT_04975___ 101 TTGGAGCATTAATACCCGATATCTGCCACACACAAAGCAAAATCGGGAGA 150
|.||||||||.||.||.|||||.|||||.|||.|||||||.||.||.|||
BL00739___yvs 101 TCGGAGCATTGATTCCGGATATATGCCATACAAAAAGCAAGATAGGCAGA 150
BSNT_04975___ 151 AAATTTCCTATTTTATCGAAAGTGGTCAGCTCCGTTTTTGGCCATCGCAC 200
|...||||.||||||||...|||||||||.||.||.||.||.||..|.||
BL00739___yvs 151 AGGCTTCCGATTTTATCAGCAGTGGTCAGTTCTGTCTTCGGGCACAGGAC 200
BSNT_04975___ 201 ATTTACACACAGCTTGCTGTTTATGCTCATCATGTTTTTTAT------CA 244
.||||||||||||.||||.|||.|||||||||.| ..|| ||
BL00739___yvs 201 GTTTACACACAGCCTGCTCTTTTTGCTCATCACG----GCATTCGCGGCA 246
BSNT_04975___ 245 CTTCTACATACATTCCAGATAAAAACATATCAGCCGGCCTGATGATCGGA 294
|.|.| |||..||.|||||.|.|.||||...|.|||..|||||..||||
BL00739___yvs 247 CATTT--ATATTTTGCAGATCAGAGCATACTTGTCGGATTGATGGCCGGA 294
BSNT_04975___ 295 ATGGCGAGCCACTTGATTCTTGACGCTTGGACGGTGAACGGAATCAAATT 344
|||||.|||||..||.|.||.||.||..||||.||.|||||.||||||.|
BL00739___yvs 295 ATGGCAAGCCATCTGCTCCTCGATGCCGGGACTGTAAACGGCATCAAACT 344
BSNT_04975___ 345 ATTATTCCCTTCAACGATCCGC-------GTTCGGCTTCCATTATATATG 387
.||.||.|| .||||| |||||.||.||..|.||.||.
BL00739___yvs 345 TTTCTTTCC-------GTCCGCCATTAAGGTTCGTCTGCCCCTTTACATT 387
BSNT_04975___ 388 AAGACAGGC----AGTTTTTCTGAGCAGCTCGTGCTAGCCGGCCTGACCC 433
||.||.||| || .|.||.||..||||.||.||.|..||.|||.
BL00739___yvs 388 AAAACCGGCGGGAAG----GCGGAACAAGTCGTTCTTGCTGTGCTCACCG 433
BSNT_04975___ 434 TTGCTTCATGTTACTACTTTTATATGC-----TGTTTCATGGGCGCATGT 478
|||.|||.||.|| |||||| ||| ||.| |||.||.
BL00739___yvs 434 TTGTTTCGTGCTA----TTTTAT-TGCGAACTTGAT-------CGCCTGA 471
BSNT_04975___ 479 TTTAA 483
BL00739___yvs 471 ----- 471
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