Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04916 and BL00733
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:06
# Commandline: needle
# -asequence dna-align/BSNT_04916___yirB.1.5803.seq
# -bsequence dna-align/BL00733.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04916___yirB-BL00733.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04916___yirB-BL00733.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04916___yirB
# 2: BL00733
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 120/177 (67.8%)
# Similarity: 120/177 (67.8%)
# Gaps: 24/177 (13.6%)
# Score: 399.0
#
#
#=======================================
BSNT_04916___ 1 ATGAGAGAATTGGACGAAATGATTAGCCGCTTGCGAAACAGAGGAATCAA 50
||||.||||.|.||.||.|||||.||.|||.||||.|.|||.|||||.||
BL00733 1 ATGAAAGAAATCGATGACATGATCAGGCGCCTGCGCAGCAGGGGAATTAA 50
BSNT_04916___ 51 AGTGGAGAAAGTCAAATATCCGAAGCA-GACCTTGTCAGAGAAAAAATGG 99
.|||||.|||||.||||||||.||||| |.|| |||..||.||.||||||
BL00733 51 GGTGGACAAAGTTAAATATCCAAAGCACGTCC-TGTGCGAAAAGAAATGG 99
BSNT_04916___ 100 GTTCATCAATGCAAACAGCCGCTCAAAACA-----------AATTACAGA 138
||| |||.||| |..|||||| |..|||.|.
BL00733 100 --------ATG-AAAAAGC--CAAAAAACACAGTGAAGCCGAGCTACCGG 138
BSNT_04916___ 139 GATTTTAACGGCTATTCTTTCACATAA 165
|||||.|||||||||||.||.|.||.|
BL00733 139 GATTTCAACGGCTATTCGTTTATATGA 165
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