Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04933 and BL00725
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:07
# Commandline: needle
# -asequence dna-align/BSNT_04933___yvqI.1.5803.seq
# -bsequence dna-align/BL00725___liaI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04933___yvqI-BL00725___liaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04933___yvqI-BL00725___liaI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04933___yvqI
# 2: BL00725___liaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity: 245/437 (56.1%)
# Similarity: 245/437 (56.1%)
# Gaps: 106/437 (24.3%)
# Score: 619.0
#
#
#=======================================
BSNT_04933___ 1 ATGAAGATCAACAAGAAAACAATAGGCGGATTCTTATTAATTGTATTTGG 50
|||||.||.||...|||..|.||...|||.||.||..||||..|.|||||
BL00725___lia 1 ATGAATATAAATGGGAAGTCCATCATCGGCTTTTTTCTAATCCTTTTTGG 50
BSNT_04933___ 51 GATCTCCGTCTTTTTTGGAGGAGGAAGCTTCGGC---TTTATCATCCCGC 97
..|||||.|.||.||.||.|||||....|||||| ||..| |.|.|.
BL00725___lia 51 CGTCTCCCTGTTCTTCGGCGGAGGCCATTTCGGCGGATTGGT--TACAGG 98
BSNT_04933___ 98 TCGCCATCGGGAG-------------------CTTGATGACAT---ACGC 125
| ||.|| .|||| |.|||..|.|| |.|.
BL00725___lia 99 T-GCTAT-TGGAGCATTGCTTCTATTCTATTCCGTGAAAAAATGGAAGGA 146
BSNT_04933___ 126 AGGA-GTCAAAAGGTTTGCCGCGGGAAAAACCATTACGGGAATCATCGTG 174
|||| |.|| ||||||||||| ||| ||
BL00725___lia 147 AGGACGCCA----GTTTGCCGCGG----------TAC-----------TG 171
BSNT_04933___ 175 GGCGGTATCGGAGCCATTATGCTCATCT-----GCTCACTTCCGTTTGTC 219
|.||..|||...|.|||.|||.| |.| |.|||.|.||||||.|.
BL00725___lia 172 GCCGCGATCTTCGGCATCATGTT--TTTGGGAGGGTCATTGCCGTTTCTG 219
BSNT_04933___ 220 GTCGGAATCGCATTGGCGGCCGCTATGGTGTATTACGGCTGGAAGCTGAT 269
.||||.|||||..|.||.||.||.|||||.||||.|||.|||||..||||
BL00725___lia 220 ATCGGCATCGCGGTTGCTGCAGCGATGGTTTATTTCGGATGGAAAATGAT 269
BSNT_04933___ 270 GAA----------AAAC-GGATCAGCTGATAACGGTGTATCATCTTTTGA 308
||| |||| ||||.| ||||.||| |
BL00725___lia 270 GAAGCAAGATGACAAACAGGATGA----------------CATCCTTT-A 302
BSNT_04933___ 309 TCCTG---AACCGG---CTTCTGCTGCCTACCA-ATCTCA----CTTTGA 347
|.|.| ||.||| ||||.||.||.| || ||..|| ||||||
BL00725___lia 303 TTCAGAGAAAACGGAGCCTTCCGCAGCTT--CATATGACACAGGCTTTGA 350
BSNT_04933___ 348 TGACGAATGGGAAGAATTTTTG---AAGAAAAAATAA 381
||..||.||||||||.|||||| |||||.||||||
BL00725___lia 351 TGCAGAGTGGGAAGACTTTTTGAAAAAGAATAAATAA 387
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