Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04937 and BL00723
See
Amino acid alignment /
Visit
BSNT_04937 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:07
# Commandline: needle
# -asequence dna-align/BSNT_04937___yvqK.1.5803.seq
# -bsequence dna-align/BL00723___yvqK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04937___yvqK-BL00723___yvqK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04937___yvqK-BL00723___yvqK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04937___yvqK
# 2: BL00723___yvqK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 405/639 (63.4%)
# Similarity: 405/639 (63.4%)
# Gaps: 117/639 (18.3%)
# Score: 1128.0
#
#
#=======================================
BSNT_04937___ 1 ATGAAACTATATACAAAAACAGGCGATAAGGGACAAACGGGCTTAGTCGG 50
||||||||.||||||||||||||||||..||||.|||||.|.|||.|.||
BL00723___yvq 1 ATGAAACTCTATACAAAAACAGGCGATCGGGGAAAAACGAGTTTAATTGG 50
BSNT_04937___ 51 GGGCAGGACGGACAAGGA-CAGCCTGCGCGTCGAAAGC-TACGGCACGAT 98
.||.|||.|.||.||.|| || .||..|.|| |.|||| ||||||||..|
BL00723___yvq 51 CGGAAGGGCCGATAAAGATCA-TCTTAGAGT-GGAAGCGTACGGCACACT 98
BSNT_04937___ 99 TGACG-AGCTTAACAGCTTTATCGGGCTTGCTTTG------------GCA 135
.||.| ||| .|||||.||.||||||||.|||..| |||
BL00723___yvq 99 GGATGAAGC-AAACAGTTTCATCGGGCTGGCTCAGTCTTATTTAAAAGCA 147
BSNT_04937___ 136 GA----GCTTTCCGGGCAGCTCGGCTTTGAAGA---TCTGACAGCCGAGC 178
|| || ||| ||||.|.|| |.||.|| |||.
BL00723___yvq 148 GAAGAGGC----------GCT---CTTTCATGATATTTTGTCA---GAGT 181
BSNT_04937___ 179 TG-CTGACTATCCAGCATGAGCTGTTTGACTGCGGAGGCGATCTGGC-AA 226
|| |.| |.|||||||||||||||||.||||||||..|.|||.|||| .|
BL00723___yvq 182 TGACCG-CCATCCAGCATGAGCTGTTCGACTGCGGCAGTGATTTGGCGCA 230
BSNT_04937___ 227 TCGTCA-----CAGAAAGAAAAGACTATAAACTAACGGAAGAATCTGT-- 269
| |||| |||.||| |||.| ||.||.|.||..|||||..|
BL00723___yvq 231 T-GTCAATGTTCAGGAAG--AAGGC---AAGCTCAAGGCTGAATCAATCA 274
BSNT_04937___ 270 ---TTCTTTTTTAGAAACACGCATTGATGCCTATACAGCAGAAGCGCCGG 316
|.||| |||..|||.||||||||||||...|..|||||||||.
BL00723___yvq 275 CCATGCTT-----GAAGAACGAATTGATGCCTATGTCGAGGAAGCGCCGC 319
BSNT_04937___ 317 AACTGAAGAAATTTATTCTTCCAGGCGGATCA-AAGGGTGCTTCGCTTCT 365
|.||||..||.|||||||||||.||||||.|| |||.| ||.||..||.|
BL00723___yvq 320 AGCTGACCAAGTTTATTCTTCCGGGCGGAACAGAAGCG-GCATCATTTTT 368
BSNT_04937___ 366 CCATATCGCACGCAC---CATTACAAGGCGGGCAGAACGAAGAG-TGGTG 411
.|||...||..|.|| |||.|.|| |.||.||||||| || |.||.
BL00723___yvq 369 GCATGCGGCGAGAACGGTCATCAGAA---GAGCTGAACGAA-AGATTGTC 414
BSNT_04937___ 412 GC----GCTGATGAAATCGGAGGAGATTCATGAAAC------AGTGCTGC 451
|| ||..|.||| ||.||.|||| | .|.|||||
BL00723___yvq 415 GCTTTGGCCAAAGAA----GAAGACATTC------CGCCGCTTGCGCTGC 454
BSNT_04937___ 452 GTTATCTCAATCGTCTGTCCGATTATTTCTTTGCCGCCGCCCGGGTTGTA 501
..||..||||.||.||||||||||||||.|||||.||.||.||..||||.
BL00723___yvq 455 CATACGTCAACCGGCTGTCCGATTATTTATTTGCGGCGGCGCGCATTGTC 504
BSNT_04937___ 502 AATGCAAGAAGCGGTATTGG------CGATGTAGAATATGAAAGAAGTGC 545
||| || |.||.|.|| .|||||.|||||||||.||||.||
BL00723___yvq 505 AAT-CA-----CCGTCTCGGGGAAGTGGATGTCGAATATGAACGAAGCGC 548
BSNT_04937___ 546 CATTG-TGT-TTCGGGACCGAAACAGCAGTGAATCATAA 582
|| ||| |||.|||| |||.|..| ||||||.|
BL00723___yvq 549 ---TGATGTATTCCGGAC--AAAGAAAA---AATCATGA 579
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.