Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04965 and BL00704
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence dna-align/BSNT_04965___fhuG.1.5803.seq
# -bsequence dna-align/BL00704___fhuG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04965___fhuG-BL00704___fhuG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04965___fhuG-BL00704___fhuG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04965___fhuG
# 2: BL00704___fhuG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1077
# Identity: 689/1077 (64.0%)
# Similarity: 689/1077 (64.0%)
# Gaps: 129/1077 (12.0%)
# Score: 1974.0
#
#
#=======================================
BSNT_04965___ 1 ATG-AAAACAAAAACAAACAAAC---------CGCTTA---TTGTAATGG 37
||| ..||.|||||| ||||.|| ||.|.| |.||.||||
BL00704___fhu 1 ATGCTCAAGAAAAAC-AACAGACGGGCGGGTGCGGTGATGCTCGTCATGG 49
BSNT_04965___ 38 CTGTGACCTTTTTGCTTA---TCGTGGTGGTCTTTTTTA-TCAGTCTCAA 83
|.| ||||.| .||..||| |||||| |.||..|.||
BL00704___fhu 50 CCG---------TGCTGACGGCCGCCGTG----TTTTTATTAAGCATGAA 86
BSNT_04965___ 84 TTTGGGCGTTATCAAAATTGCACCGCTTAAAACGCTTCAGGTCTTT---- 129
..||||.|..|||...||.|..|||||| |||.|| ||
BL00704___fhu 87 CATGGGAGAAATCCGCATCGACCCGCTT-----GCTACA-----TTGAGA 126
BSNT_04965___ 130 ------TTCGGCCAAGGAACGGCGCGTGATGAACTTGTCTTATTTGAGTT 173
||||||...||||||.|||..|||||||||||.||||||||.||
BL00704___fhu 127 ACACTGTTCGGCTTTGGAACGCCGCAGGATGAACTTGTATTATTTGAATT 176
BSNT_04965___ 174 CAGGCTGCCTCGGATCATCCTTTCTTTGCTTGTTGGAGCAGGGATCTCCG 223
|.|.|||||.||.||.|||||..|..||||..|.||.||||||.|..|.|
BL00704___fhu 177 CCGTCTGCCGCGCATGATCCTCGCCATGCTGATCGGTGCAGGGGTTGCTG 226
BSNT_04965___ 224 TAGCTGGAGCCATTTTGCAAAGCGTGTCTCAAAATGAACTTGCCGAGCCT 273
|..|.||||||.|.|.|||..|..|.||.|..|||||.||.|||||.||.
BL00704___fhu 227 TCTCCGGAGCCGTCTGGCAGGGGATATCCCGGAATGACCTGGCCGATCCG 276
BSNT_04965___ 274 GGTATTCTCGGAATTAACGCCGG---CGGTTCACTTGCTGTAGTGCTTTT 320
||.||..|.||.||.||..|.|| .|||| ||||.||.|||||.||
BL00704___fhu 277 GGGATATTGGGCATCAATACGGGAGCGGGTT---TTGCCGTTGTGCTGTT 323
BSNT_04965___ 321 TATATACTTTTTTCAAG--------GGTCAGCTTCA-----GATCTCAGC 357
.||.|.||.||||||.| ||..|.||.|| ||| || |.
BL00704___fhu 324 CATCTTCTATTTTCAGGGAGACGTTGGCAACCTGCAAAAAGGAT-TC-GT 371
BSNT_04965___ 358 TTTTTCGGAACATTTATGCTGCC---ATTCAGTGC---TTTGGCAGGAGC 401
|||||| .||||| |||| || |||| |||||
BL00704___fhu 372 TTTTTC-----------CCTGCCGATATTC---GCATTTTTG---GGAGC 404
BSNT_04965___ 402 AATCCTCGCTG-CGTTTCTCATTTATATTCTGGCATGGAAAAAAGGCGTG 450
...|.|.||.| |||||| |||.|||.|.|||||.||||||||||||.||
BL00704___fhu 405 CTGCTTTGCAGTCGTTTC-CATCTATTTGCTGGCGTGGAAAAAAGGCTTG 453
BSNT_04965___ 451 ACACCGATTCGGCTGATTTTAGTCGGCATAGGGGTGAATGC--CGGATTC 498
|..||.|||||.||..||||.||||||||.||.|||||||| ||..|||
BL00704___fhu 454 AATCCCATTCGCCTCGTTTTGGTCGGCATCGGAGTGAATGCGGCGTTTTC 503
BSNT_04965___ 499 AATGCCC----TGTTGCTGATTTTTCAGCTTAAGATGGACCCTCATGATT 544
...|.|| |..||||| ||||||||.||||||||..||||.|
BL00704___fhu 504 GGCGGCCATCTTAATGCTG------CAGCTTAAAATGGACCCAAATGACT 547
BSNT_04965___ 545 TTATGCAAGCCGCGGTTTGGATATCCGGCTCAATATGGGGGGCGAACTGG 594
|||||||.||.||.||||||.|.||.||....||||||.|..||||||||
BL00704___fhu 548 TTATGCAGGCGGCTGTTTGGCTGTCAGGGAATATATGGAGTTCGAACTGG 597
BSNT_04965___ 595 A-ATATGATCTGGGCGATTCTCCCTTGGATTGTGATCTTGCTTCTGTTTA 643
| .|.|| |||.|||..|.||.||.||||||||..|..||.|||..||||
BL00704___fhu 598 AGCTTTG-TCTCGGCCGTGCTGCCCTGGATTGTCGTGCTGATTCCTTTTA 646
BSNT_04965___ 644 CTTTATATAAGGCACGCTATTTGAACATTATGCAGCTCGGAGACCAATTG 693
...|.|||||.||.||||||||.|||.|..||.|.|||||.||.||..|.
BL00704___fhu 647 TCCTCTATAAAGCGCGCTATTTAAACGTGCTGAATCTCGGTGATCAGCTC 696
BSNT_04965___ 694 GCGACCGGGCTGGGCACCGCTGTTGAAAAGGAAAGACGGATTCTTCTTCT 743
||.||.|||||.||.||.||.||||||||.||..|.||.|..||.|||||
BL00704___fhu 697 GCAACAGGGCTCGGAACGGCAGTTGAAAAAGAGCGGCGCACACTGCTTCT 746
BSNT_04965___ 744 GGCAGCGGTCACTCT-TGCCGCTTCATGCGTG-GCAGCTGCGGGGGG--- 788
|.|.||.|.|.|.|| .||.|| ||||| |.|||.||.||.||
BL00704___fhu 747 GTCGGCAGCCGCGCTGAGCGGC-----GCGTGTGTAGCGGCTGGAGGAAA 791
BSNT_04965___ 789 CATTGCGTTTCTCGGATTGATCGCGCCGCATGTGGCTAGAAGGC-TGACC 837
||||.||||||||||..|..|.||.||||||.|.||.|||||.| ||.|.
BL00704___fhu 792 CATTACGTTTCTCGGTCTCGTGGCTCCGCATATTGCCAGAAGACTTGTCG 841
BSNT_04965___ 838 GGTCCACGTCACCAGACGCTGATACCGGTCTCCGCCTTCATCGGCTCATT 887
||.|.|.| ||.|||....|.||.||||..|||||.||.|.|||..||||
BL00704___fhu 842 GGCCGAAG-CATCAGCTTTTAATCCCGGCTTCCGCGTTGACCGGAGCATT 890
BSNT_04965___ 888 CCTGTTTTTGCTTGCTGA--TACGCTGGCGAGAAATG-TATTGGCACCAT 934
.||.||||||||.||.|| || .|.| ||..|||| ||.||||.||.|
BL00704___fhu 891 GCTCTTTTTGCTGGCGGACTTA--ATTG-GAAGAATGATACTGGCGCCTT 937
BSNT_04965___ 935 CAGAAATTCCGGTCGGACTTGTCATTTCCGTGCTAGGTGCGCCTTACTTT 984
|.||||||||.||.||.|||||||||.|||...||||.||.||.||.|||
BL00704___fhu 938 CGGAAATTCCCGTAGGGCTTGTCATTGCCGCTTTAGGCGCACCGTATTTT 987
BSNT_04965___ 985 ATTTATTTATTGATGAAAGCGAATTAG 1011
||.|||||..|.||||||.|.|||||.
BL00704___fhu 988 ATCTATTTGCTTATGAAAACAAATTAA 1014
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