Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04992 and BL00698
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:11
# Commandline: needle
# -asequence dna-align/BSNT_04992___yvgT.1.5803.seq
# -bsequence dna-align/BL00698___yvgT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04992___yvgT-BL00698___yvgT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04992___yvgT-BL00698___yvgT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04992___yvgT
# 2: BL00698___yvgT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity: 460/642 (71.7%)
# Similarity: 460/642 (71.7%)
# Gaps: 63/642 ( 9.8%)
# Score: 1684.5
#
#
#=======================================
BSNT_04992___ 1 ATGGCTTGGGAGCTGCTCAGTGTGATTG-GCATCA---------TTGCGT 40
||||||||||| |||| ||| |||||| |.||.|
BL00698___yvg 1 ATGGCTTGGGA-------AGTG---TTGAGCATCATCGGAACCGTCGCTT 40
BSNT_04992___ 41 TTGCAGTCAGCGGCGCAATTGTTGCGATGGAAGAGGAATATGATATTTTA 90
||||..|||||||.||.||.|||||.||||||||.||.||||||||||||
BL00698___yvg 41 TTGCGATCAGCGGAGCGATCGTTGCAATGGAAGAAGAGTATGATATTTTA 90
BSNT_04992___ 91 GGAGTTTATATATTAGGGATTGTCACCGCTTTTGGAGGAGGAGCGATCCG 140
||||||||||||||.||||||||.||.||.||.||.|||||.||||||.|
BL00698___yvg 91 GGAGTTTATATATTGGGGATTGTGACAGCGTTCGGCGGAGGGGCGATCAG 140
BSNT_04992___ 141 CAATTTGCTGATCGGAGTTCCGGTGTCAGCGCTATGGGAGCAGGGAGCGT 190
.||..||||.|||||||||||.|||||.||..|.||||||||||| |.||
BL00698___yvg 141 AAACCTGCTCATCGGAGTTCCAGTGTCCGCCTTGTGGGAGCAGGG-GAGT 189
BSNT_04992___ 191 AC--TTTCAAATCGCGCTTTTATCTATTACAATTGTGTTTCTGTTTCCGA 238
| ||||.||||||.|||.|.||.||.||.||.||.|||.|||||||||
BL00698___yvg 190 -CTGTTTCTAATCGCTCTTGTCTCGATCACGATCGTTTTTTTGTTTCCGA 238
BSNT_04992___ 239 AGCTGCTGCTGAAGCATTGGAATAAGTGGGGCAATTTATCAGATGCGATC 288
||||.|||.|.|||||.||||..|..|||||||..||.|||||.||||||
BL00698___yvg 239 AGCTCCTGTTAAAGCACTGGAGCATCTGGGGCAGCTTTTCAGACGCGATC 288
BSNT_04992___ 289 GGCCTCGCTGCCTTTGCTATCCAAGGCGCACTGTATGCTGTCAAAATGGG 338
||.||.||.||.|||||.||.|||||.||.||.|||||.||..|.|||..
BL00698___yvg 289 GGTCTTGCCGCATTTGCGATACAAGGAGCCCTTTATGCCGTTCACATGAA 338
BSNT_04992___ 339 CCATCCGCTTAGTGCCGTGATCGTGGCTGCGGTGCTGACGGGAAGCGGGG 388
|||||||.|.||.||.||||||||.||.|||||..|.||.||||||||.|
BL00698___yvg 339 CCATCCGGTCAGCGCAGTGATCGTTGCGGCGGTCTTAACAGGAAGCGGCG 388
BSNT_04992___ 389 GCGGAATCATCCGCGACCTTCTTGCCGGGCGCAAACCGCTTGTGCTGAAG 438
|||||||.|||||.||||||||.|||||..|.||.||||||||||||||.
BL00698___yvg 389 GCGGAATGATCCGGGACCTTCTGGCCGGAAGAAAGCCGCTTGTGCTGAAA 438
BSNT_04992___ 439 GCAGAAATTTATGCAGTCTGGGCGGCTCTCGGCGGTTTAATCGTCGGCTT 488
.|.||.|||||.||.||.|||||.|||.|.|||||.||.||..|||||.|
BL00698___yvg 439 ACGGAGATTTACGCCGTTTGGGCCGCTTTGGGCGGATTCATTATCGGCAT 488
BSNT_04992___ 489 GGGCTGGCTGGGGAACTCGTTCGGCTTATACGTT-------CTGTTT--T 529
|||||||..||.|||..||.|| ||||| |||||| |
BL00698___yvg 489 GGGCTGGGCGGAGAAGCCGCTC-------ACGTTGTATATCCTGTTTGCT 531
BSNT_04992___ 530 TCGTGCTCGTTGTTTGCCGGGTTTGTTCCTATATGTTTAATTGGAAGCTG 579
| ||||.||.|..|||||.||.|||||.||.|||||.||.|||||||||
BL00698___yvg 532 T--TGCTGGTCGCGTGCCGTGTATGTTCGTACATGTTCAACTGGAAGCTG 579
BSNT_04992___ 580 CCAAACCGTTCTTTTC---------GCTTAGATAGTCAGTAA 612
||.||||||||..|.| |||.|
BL00698___yvg 580 CCGAACCGTTCGCTGCGGTCCCACAGCTGA------------ 609
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