Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03116 and BL00697
See
Amino acid alignment /
Visit
BSNT_03116 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_03116___yocA.1.5803.seq
# -bsequence dna-align/BL00697.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03116___yocA-BL00697.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03116___yocA-BL00697.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03116___yocA
# 2: BL00697
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 708
# Identity: 471/708 (66.5%)
# Similarity: 471/708 (66.5%)
# Gaps: 87/708 (12.3%)
# Score: 1474.0
#
#
#=======================================
BSNT_03116___ 1 GTGAAGAAAAAGAGAAAAGGCTGTTTCGCTGCTGCGGG--TTTTATGATG 48
.||||||||||||.|..|||.|||||.||.|..||.|| .|||.|.||
BL00697 1 TTGAAGAAAAAGAAATCAGGATGTTTAGCCGGAGCTGGCTGTTTGTCAT- 49
BSNT_03116___ 49 ATTTTTGTCTTTGT--CATCGCCTCTTTTTTATTGGTCCTGCTTTTTTTC 96
|||||||.||||| |||.| .||.||||..||| ||..||
BL00697 50 -TTTTTGTGTTTGTTCCATTG-ATCATTTTCTTTG--CCATCT------- 88
BSNT_03116___ 97 AACCGGGATTTAG-TCAA--AAAA---CTTCCGATCGATACAAAAACGAT 140
|||| |.|.| .||| |||| |||||..|.||.||..||.|.|.
BL00697 89 --CCGG--TCTGGAACAATTAAAATGGCTTCCTCTTGACACTGAATCTAA 134
BSNT_03116___ 141 TGTTTTGGAACGTTTAACCGATTACAAACC-CTTGGTGGAAGAAGAGCTT 189
|.||.|.||..|.||||..||||||||.|| ||| ||.||||||||.||.
BL00697 135 TATTCTTGAGAGATTAAAAGATTACAAGCCTCTT-GTTGAAGAAGAACTC 183
BSNT_03116___ 190 GAAAGCCAAGGACTCTCTAATTATACATC--ACTCATATTAGGCATGATG 237
||.|..||.|| |||.|.|..|||||.| .||..||||.|||||||||
BL00697 184 GATAAACAGGG--TCTTTCACAATACACCGGTCTTTTATTGGGCATGATG 231
BSNT_03116___ 238 TATCAGGAGTCAAAAGGAAAAGGCAATGATCCCATGCAGTCCTCTGAATC 287
|||||.|||||||||||.|.||||..||||||.||||||||.||.|||||
BL00697 232 TATCAAGAGTCAAAAGGCAGAGGCGGTGATCCGATGCAGTCGTCGGAATC 281
BSNT_03116___ 288 TCTGGGGTTAAAACGCAATGAGATAACAGACCCT-CAACTCAGTGTTAAA 336
|||.||..|.||.||.|||||||| .|||..| ||| ||.
BL00697 282 TCTCGGCATGAAGCGAAATGAGAT---TGACGATCCAA---------AAG 319
BSNT_03116___ 337 CAAGGCATCAAG------------CAATTTACCCTCATGTA-CAAGACCG 373
||| ||||.||| ||.|||||..|.||||| |||.| |
BL00697 320 CAA-GCATTAAGCAGGGTGTGCGCCATTTTACAGTAATGTATCAAAA--G 366
BSNT_03116___ 374 GTA-AGGAAAAAGGCGTGGATTTGGATACCATTATTCAAAGCTACAACAT 422
|.| ||.||||||||||.|||.|.||.||.|||||.||||||||.||.||
BL00697 367 GGACAGAAAAAAGGCGTCGATATTGAAACGATTATCCAAAGCTATAATAT 416
BSNT_03116___ 423 GGGGGCAGGTTACATTGATTTTGTAGCTGAACATGGAGGAACGCATACTG 472
||||||.|||||.||.||.|.|||..|..||||.||.||||.|||..|||
BL00697 417 GGGGGCCGGTTATATCGACTATGTCTCAAAACACGGCGGAAAGCACTCTG 466
BSNT_03116___ 473 AGGAATTGGCAAAACAATACTCCGAGCAGCAAGTCAAAAAAAATCCTGAT 522
||.|..|||||||...||..|||||..|.|||||||||||.||.||.||.
BL00697 467 AGAAGCTGGCAAAGGCATTTTCCGAAGAACAAGTCAAAAAGAACCCCGAC 516
BSNT_03116___ 523 CTGTATACTTGCGGGGGAAATGCGAAAAATTTCCGCTATCCGTATTGCTA 572
|||||.|.||||||.||..||.|.||.||||||||||||||.||||||||
BL00697 517 CTGTACAATTGCGGCGGGGATACAAACAATTTCCGCTATCCTTATTGCTA 566
BSNT_03116___ 573 CGGTGATTATACGTATGCAGAAAAAGTAAAAGAAAAAACAAAAACTGTTG 622
|||.|||||..|.||..|.||||||||||..|||...|||||||..||.|
BL00697 567 CGGGGATTACTCTTACACGGAAAAAGTAATGGAACGCACAAAAAAAGTCG 616
BSNT_03116___ 623 AAGAATCT-TTGCAGG-TTGCAACACTTGAAACCATGGAATCCAAGGCTC 670
|||||..| |.|.||| || |||||||||| |||.||
BL00697 617 AAGAACATATCGAAGGATT--AACACTTGAA--CATTGA----------- 651
BSNT_03116___ 671 ATGAATAA 678
BL00697 651 -------- 651
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.