Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02797 and BL00686

See Amino acid alignment / Visit BSNT_02797 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:33
# Commandline: needle
#    -asequence dna-align/BSNT_02797___cwlC.1.5803.seq
#    -bsequence dna-align/BL00686___cwlC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02797___cwlC-BL00686___cwlC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02797___cwlC-BL00686___cwlC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02797___cwlC
# 2: BL00686___cwlC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 808
# Identity:     557/808 (68.9%)
# Similarity:   557/808 (68.9%)
# Gaps:          86/808 (10.6%)
# Score: 1806.5
# 
#
#=======================================

BSNT_02797___      1 ATGGTTAAAATTTTTATTGATCCTGGCCATGGCGGGTCTGATCCAGGCGC     50
                     .||||.|||||||||||.|||||.||||||||||||.|||||||||||||
BL00686___cwl      1 GTGGTAAAAATTTTTATCGATCCCGGCCATGGCGGGACTGATCCAGGCGC     50

BSNT_02797___     51 AACAGGTAATGGCCTTCAGGAAAAAACGTTAACCCTGCAAATCGCTTTAG    100
                     ..|||..|||||..|.||.||||||..||||||..||||||||||.||.|
BL00686___cwl     51 TTCAGCCAATGGTTTGCAAGAAAAACAGTTAACATTGCAAATCGCCTTGG    100

BSNT_02797___    101 CCTTACGTACGATATTAACT----AATGAATATGAAGGCGTTTCTCTGCT    146
                     |.|||.|.|  |.|||  ||    |||||||||.||...|||.|..|.|.
BL00686___cwl    101 CTTTAAGAA--ACATT--CTCCTGAATGAATATCAAAATGTTACAGTCCA    146

BSNT_02797___    147 GCTGAGCCGGACAAGCGACCAATATGTCAG-CTTAAACG-ACCGGACAAA    194
                     ||||||||||||||||||||||...||||| ||  .||| |.||.||.||
BL00686___cwl    147 GCTGAGCCGGACAAGCGACCAAACCGTCAGTCT--GACGCAACGCACGAA    194

BSNT_02797___    195 TGCCGCAAATAACTGGGGAGCAGATTTCTTTTTGTCCATTCACGTTAATT    244
                     .|||||.||.|.||||||.||.||.|.||||.|.||.||||||.|.|||.
BL00686___cwl    195 CGCCGCGAACAGCTGGGGGGCGGACTACTTTCTATCGATTCACATCAATG    244

BSNT_02797___    245 CCGGGGGAGGCACAGGTTTTGAAAGCTATATTTATCCAGATGTAGGAGCC    294
                     |||||||.||.||||||||.||....||.||||||||.|..||.||.||.
BL00686___cwl    245 CCGGGGGCGGGACAGGTTTCGAGGATTACATTTATCCCGGCGTCGGCGCA    294

BSNT_02797___    295 CCGACGACGACTTATC----AATCGACAATTCACTCTGAAGTGA---TAC    337
                     ||.||.||.||.||||    .|||    ||.||   |||||.||   ||.
BL00686___cwl    295 CCTACCACCACCTATCGGGATATC----ATGCA---TGAAGAGATTTTAA    337

BSNT_02797___    338 AAGCTGTCGACTTTGCCGATCGCGGCAAAAAAACAGCGAACTTCCACGTC    387
                     |||..||.||.||....|||||||||||.||||||||.||.||.|||||.
BL00686___cwl    338 AAGTGGTTGATTTCAGGGATCGCGGCAAGAAAACAGCCAATTTTCACGTG    387

BSNT_02797___    388 CTAAGGGAGTCGGCAATGCCTGCCCT-CTTGACCGAGAACGGCTTCATTG    436
                     ||||||||..|.||||||||.||.|| ||| ||.||.||.|||||..|.|
BL00686___cwl    388 CTAAGGGAAACAGCAATGCCAGCACTGCTT-ACGGAAAATGGCTTTGTAG    436

BSNT_02797___    437 ---ATAC-CGTTTCCGATGCAAATAAGCTGAAAACGAGCAGT--------    474
                        |||| .|    |||.||..|.||.||||        |||        
BL00686___cwl    437 ACAATACAAG----CGACGCCGAGAAACTGA--------AGTCATCCGCG    474

BSNT_02797___    475 TTTATTCAAAGCTTAGCGAGAGGACATGCAAACGGGCTGGAGCAA--GCC    522
                     |||||||||..|.|.||||||||.||.||.|||||.|||  ||||  ||.
BL00686___cwl    475 TTTATTCAATCCATTGCGAGAGGCCACGCCAACGGACTG--GCAAGGGCA    522

BSNT_02797___    523 TTTAACCTT--AAAAAGACTTCCA----GCTTAGGGTTATATAAGGTTCA    566
                     |||||||||  |||||.|  ||||    .|||       |.|||.||.||
BL00686___cwl    523 TTTAACCTTTCAAAAAAA--TCCACAGCCCTT-------TTTAAAGTGCA    563

BSNT_02797___    567 AATCGGCGCATTTAAAGTCAAAGCGAATGCCGACTCGCTCGCAAGTAAAG    616
                     |||||||||.||.|..|.||||||.||.|||||.||.||.||...|.|||
BL00686___cwl    564 AATCGGCGCTTTCAGGGACAAAGCCAACGCCGATTCACTTGCCGCTCAAG    613

BSNT_02797___    617 CCGAAGCCAAAGGTTTTGACTCGATTGTCCTTTTAAAGGACGGATTATAC    666
                     |..||||.|||||.|||||..|.|||||..||...|.||||.|..|.|||
BL00686___cwl    614 CGAAAGCAAAAGGGTTTGATGCCATTGTAATTGACAGGGACAGCCTTTAC    663

BSNT_02797___    667 AAAGTGCAGATTGGCGCATTTTCATCCAAAGACAATGCAGACACCCTGGC    716
                     ||||||||.||||||||.|||||.||.|||||.||||||||..|.||   
BL00686___cwl    664 AAAGTGCAAATTGGCGCCTTTTCTTCGAAAGAGAATGCAGAAGCGCT---    710

BSNT_02797___    717 TG-TCAG--AGCGAAAAATGCCGGCTTTGACGCT---ATTGTGATCCTAG    760
                     || ||||  |||.|||||.|||||.|||||.|||   |||    |.|.||
BL00686___cwl    711 TGTTCAGCAAGCCAAAAACGCCGGATTTGATGCTTTCATT----TACCAG    756

BSNT_02797___    761 AATCATAG    768
                     .|  ||||
BL00686___cwl    757 GA--ATAG    762


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02797 and BL00686

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
