Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03926 and BL00683

See Amino acid alignment / Visit BSNT_03926 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence dna-align/BSNT_03926___yrhP.1.5803.seq
#    -bsequence dna-align/BL00683___yrhP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03926___yrhP-BL00683___yrhP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03926___yrhP-BL00683___yrhP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03926___yrhP
# 2: BL00683___yrhP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 650
# Identity:     470/650 (72.3%)
# Similarity:   470/650 (72.3%)
# Gaps:          34/650 ( 5.2%)
# Score: 1692.5
# 
#
#=======================================

BSNT_03926___      1 ATGCACAGCTTACTCGCATACATACCGATCGCTGCCATGATGGTTATCAT     50
                     |||.|.|||.|.||..||||||||.||||.||.|||||||||||..|.||
BL00683___yrh      1 ATGGATAGCCTGCTGTCATACATATCGATTGCAGCCATGATGGTGGTGAT     50

BSNT_03926___     51 ACCGGGGGCAGATACGATGCTTGTGATGAAAAATACGCTTAGGTATGGCC    100
                     |||.||.||.|||||||||||||||.|||||||.||||||.|.||.||.|
BL00683___yrh     51 ACCCGGAGCCGATACGATGCTTGTGGTGAAAAACACGCTTCGATACGGTC    100

BSNT_03926___    101 CGAAAGCCGGCCGTTATAACATTCTCGGATTGGCAACAGGACTTTCCTTT    150
                     ||||.|||||.||.|..||..|||||||.|||||.||.||.|||||.||.
BL00683___yrh    101 CGAACGCCGGGCGCTGCAATGTTCTCGGCTTGGCGACGGGGCTTTCTTTC    150

BSNT_03926___    151 TGGACGGTGATTGCCATTTTAGGATTATCAGTGGTGATCGCAAAGTCAGT    200
                     ||||||.||||||||.||.|.||.|||.|.||||||||.||.||.||.||
BL00683___yrh    151 TGGACGCTGATTGCCGTTCTCGGCTTAGCGGTGGTGATTGCGAAATCGGT    200

BSNT_03926___    201 GATTCTTTTCACAACGATCAAATATTTGGGAGCGGCATACTTAATTTATT    250
                     ||||||.||||..|||||||||||.|||||.|||||.||.|||||.||||
BL00683___yrh    201 GATTCTGTTCAATACGATCAAATACTTGGGGGCGGCCTATTTAATATATT    250

BSNT_03926___    251 TAGGTGTAAAAAGTTTTTTTGCTAAAAGTATGTTTTCGTTAGATGACATG    300
                     ||||..|.|||||.|||||.||.||||..||||||||.||.||.||.||.
BL00683___yrh    251 TAGGCATTAAAAGCTTTTTCGCGAAAAAAATGTTTTCTTTGGAAGAGATA    300

BSNT_03926___    301 CAATCCCA----AGCAAAAAATATGGCAAGTTCTCCGAAA----------    336
                     |||.||.|    |.||||||               |||||          
BL00683___yrh    301 CAAGCCGAGAAGAACAAAAA---------------CGAAAACGCATCAAG    335

BSNT_03926___    337 -CGTTATTATAAAACTTCCTTTATGCAAGGATCACTCAGTAACATTCTCA    385
                      ||..|||||||...|||.|||||||||||||...||||.||||||||.|
BL00683___yrh    336 CCGGCATTATAAGGATTCTTTTATGCAAGGATTGTTCAGCAACATTCTGA    385

BSNT_03926___    386 ATCCTAAAACTGTTTTGGTGTATGTTACAATCATGCCCCAATTTATCAAT    435
                     ||||.||||||||||||||.|||.|.||.||.|||||.||||||||.||.
BL00683___yrh    386 ATCCGAAAACTGTTTTGGTCTATATCACGATTATGCCTCAATTTATTAAC    435

BSNT_03926___    436 TTGAACGGAAA-TATAAACCAGCAGCTCATTATTTTAGCTTCAATCCTAA    484
                     || ||..|||| ..|.|||||||||.|.||.||..|.||||.||||||.|
BL00683___yrh    436 TT-AAGAGAAAGCGTCAACCAGCAGTTGATCATCCTCGCTTTAATCCTTA    484

BSNT_03926___    485 CCTTATTAGCGGTGTTGTGGTTCCTGTTTCTTGTTTATATTATTGATTAC    534
                     |.||..|.||.|||||.||||||||..|.||.||.|||.|.||.||||.|
BL00683___yrh    485 CTTTTCTTGCTGTGTTTTGGTTCCTCATCCTCGTATATTTGATCGATTTC    534

BSNT_03926___    535 GCAAAAAAATGGATGAAAAACTCGAAGTTCCAGAAAGTGTTTCAAAAAAT    584
                     |||||.||||||.|||.||.|..|||.||||||||..|.|||||||||..
BL00683___yrh    535 GCAAAGAAATGGCTGAGAAGCGTGAAATTCCAGAAGATCTTTCAAAAAGC    584

BSNT_03926___    585 TACCGGAATAATATTAGTAGGTTTCGGCATCAAAACTGGTTT-GAGTTAA    633
                     |.|.||..|..|..|.||.||.||.|||.|.|||||.||||| ||.|.| 
BL00683___yrh    585 TGCGGGTCTGGTGCTTGTCGGATTTGGCGTTAAAACGGGTTTAGATTGA-    633


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