Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03926 and BL00683
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_03926___yrhP.1.5803.seq
# -bsequence dna-align/BL00683___yrhP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03926___yrhP-BL00683___yrhP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03926___yrhP-BL00683___yrhP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03926___yrhP
# 2: BL00683___yrhP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 650
# Identity: 470/650 (72.3%)
# Similarity: 470/650 (72.3%)
# Gaps: 34/650 ( 5.2%)
# Score: 1692.5
#
#
#=======================================
BSNT_03926___ 1 ATGCACAGCTTACTCGCATACATACCGATCGCTGCCATGATGGTTATCAT 50
|||.|.|||.|.||..||||||||.||||.||.|||||||||||..|.||
BL00683___yrh 1 ATGGATAGCCTGCTGTCATACATATCGATTGCAGCCATGATGGTGGTGAT 50
BSNT_03926___ 51 ACCGGGGGCAGATACGATGCTTGTGATGAAAAATACGCTTAGGTATGGCC 100
|||.||.||.|||||||||||||||.|||||||.||||||.|.||.||.|
BL00683___yrh 51 ACCCGGAGCCGATACGATGCTTGTGGTGAAAAACACGCTTCGATACGGTC 100
BSNT_03926___ 101 CGAAAGCCGGCCGTTATAACATTCTCGGATTGGCAACAGGACTTTCCTTT 150
||||.|||||.||.|..||..|||||||.|||||.||.||.|||||.||.
BL00683___yrh 101 CGAACGCCGGGCGCTGCAATGTTCTCGGCTTGGCGACGGGGCTTTCTTTC 150
BSNT_03926___ 151 TGGACGGTGATTGCCATTTTAGGATTATCAGTGGTGATCGCAAAGTCAGT 200
||||||.||||||||.||.|.||.|||.|.||||||||.||.||.||.||
BL00683___yrh 151 TGGACGCTGATTGCCGTTCTCGGCTTAGCGGTGGTGATTGCGAAATCGGT 200
BSNT_03926___ 201 GATTCTTTTCACAACGATCAAATATTTGGGAGCGGCATACTTAATTTATT 250
||||||.||||..|||||||||||.|||||.|||||.||.|||||.||||
BL00683___yrh 201 GATTCTGTTCAATACGATCAAATACTTGGGGGCGGCCTATTTAATATATT 250
BSNT_03926___ 251 TAGGTGTAAAAAGTTTTTTTGCTAAAAGTATGTTTTCGTTAGATGACATG 300
||||..|.|||||.|||||.||.||||..||||||||.||.||.||.||.
BL00683___yrh 251 TAGGCATTAAAAGCTTTTTCGCGAAAAAAATGTTTTCTTTGGAAGAGATA 300
BSNT_03926___ 301 CAATCCCA----AGCAAAAAATATGGCAAGTTCTCCGAAA---------- 336
|||.||.| |.|||||| |||||
BL00683___yrh 301 CAAGCCGAGAAGAACAAAAA---------------CGAAAACGCATCAAG 335
BSNT_03926___ 337 -CGTTATTATAAAACTTCCTTTATGCAAGGATCACTCAGTAACATTCTCA 385
||..|||||||...|||.|||||||||||||...||||.||||||||.|
BL00683___yrh 336 CCGGCATTATAAGGATTCTTTTATGCAAGGATTGTTCAGCAACATTCTGA 385
BSNT_03926___ 386 ATCCTAAAACTGTTTTGGTGTATGTTACAATCATGCCCCAATTTATCAAT 435
||||.||||||||||||||.|||.|.||.||.|||||.||||||||.||.
BL00683___yrh 386 ATCCGAAAACTGTTTTGGTCTATATCACGATTATGCCTCAATTTATTAAC 435
BSNT_03926___ 436 TTGAACGGAAA-TATAAACCAGCAGCTCATTATTTTAGCTTCAATCCTAA 484
|| ||..|||| ..|.|||||||||.|.||.||..|.||||.||||||.|
BL00683___yrh 436 TT-AAGAGAAAGCGTCAACCAGCAGTTGATCATCCTCGCTTTAATCCTTA 484
BSNT_03926___ 485 CCTTATTAGCGGTGTTGTGGTTCCTGTTTCTTGTTTATATTATTGATTAC 534
|.||..|.||.|||||.||||||||..|.||.||.|||.|.||.||||.|
BL00683___yrh 485 CTTTTCTTGCTGTGTTTTGGTTCCTCATCCTCGTATATTTGATCGATTTC 534
BSNT_03926___ 535 GCAAAAAAATGGATGAAAAACTCGAAGTTCCAGAAAGTGTTTCAAAAAAT 584
|||||.||||||.|||.||.|..|||.||||||||..|.|||||||||..
BL00683___yrh 535 GCAAAGAAATGGCTGAGAAGCGTGAAATTCCAGAAGATCTTTCAAAAAGC 584
BSNT_03926___ 585 TACCGGAATAATATTAGTAGGTTTCGGCATCAAAACTGGTTT-GAGTTAA 633
|.|.||..|..|..|.||.||.||.|||.|.|||||.||||| ||.|.|
BL00683___yrh 585 TGCGGGTCTGGTGCTTGTCGGATTTGGCGTTAAAACGGGTTTAGATTGA- 633
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