Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03290 and BL00681
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence dna-align/BSNT_03290___ypwA.1.5803.seq
# -bsequence dna-align/BL00681___ypwA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03290___ypwA-BL00681___ypwA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03290___ypwA-BL00681___ypwA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03290___ypwA
# 2: BL00681___ypwA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1588
# Identity: 1054/1588 (66.4%)
# Similarity: 1054/1588 (66.4%)
# Gaps: 167/1588 (10.5%)
# Score: 3226.0
#
#
#=======================================
BSNT_03290___ 1 ATGGAGATACATACATATGAAAAAGAATTTTTTGATCTTTTAAAAAGAAT 50
|||..|||..||||||||||||||||.|||||.||....|||||.|.|||
BL00681___ypw 1 ATGTCGATCAATACATATGAAAAAGAGTTTTTAGAAACATTAAAGAAAAT 50
BSNT_03290___ 51 CTCACATTACAGC------GAAGCAGTTGCG-TTA-----ATGCACTGGG 88
|||| | ||||| ||| ||| |||.||||||
BL00681___ypw 51 ---------CAGCCGGTATG-AGCAG--GCGATTAATGTCATGTACTGGG 88
BSNT_03290___ 89 ACTCCAGAACAGGAGCGCCGA-AAAACGGCTCAGAGGA---TCGTGCCGA 134
|....|||||.||.||||||| ||||.|| ||||| .||.||.|
BL00681___ypw 89 ATATGAGAACGGGCGCGCCGAGAAAAGGG----GAGGAAAGCCGCGCTG- 133
BSNT_03290___ 135 AAGC-ATCGGCCAGCTTTCAACAGATATATTCAATATCCAAACATCAGAT 183
|||| ||||||||..|.||..||||..|.|| ||||||
BL00681___ypw 134 AAGCTATCGGCCAATTGTCGGCAGACGTCTT-------------TCAGAT 170
BSNT_03290___ 184 -------------CGAATGAAGGAGCTTATCGATGTCCT-------GTAT 213
||.|||||.||||||.|.||| .||| |.|.
BL00681___ypw 171 GAGAACGTCCCCGCGGATGAAAGAGCTTTTGGAT-ACCTTAGCCGGGCAA 219
BSNT_03290___ 214 GAAC--GATTTGATGACTTGTCGGAAGATACGAAAAAAGCAGTGGAACTG 261
.||| ||| .||.|||.| |||||..|.|||||.||.|||...
BL00681___ypw 220 AAACAAGAT---CTGCCTTTT-----GATACACAGAAAGCGGTTGAAGAA 261
BSNT_03290___ 262 GCGAAAAAAGAGTACGAAGAGAATAAGAAAATCCCTGAGGCTGAATACAA 311
|||||||||||||||||....||.|..||.||.||.||.|..||.|.|||
BL00681___ypw 262 GCGAAAAAAGAGTACGATTTAAACAGCAAGATTCCGGAAGAGGAGTTCAA 311
BSNT_03290___ 312 AGAATACGTGATTCTGTGTTCAAAGGCAGAAACAGCGTGGGAGGAAGCGA 361
||||||...||..|||..|||.||.||.|||.|.|..|||||..||||||
BL00681___ypw 312 AGAATATACGACACTGACTTCCAAAGCGGAATCCGTCTGGGAAAAAGCGA 361
BSNT_03290___ 362 AAGGAAAA----TCTGATTTCAGCT-TGTTTTCTCCTTATTTAGAACAGC 406
|||| ||.||||| ..|| |.|||.||||.|||||||||.|..
BL00681___ypw 362 ----AAAAGGCGTCCGATTT-TTCTCTCTTTGCTCCGTATTTAGAAAAAA 406
BSNT_03290___ 407 TGATTGAATTCAATAAACGTTTTATTACGTATTGGGGATATCAAGAGCAT 456
|.||.||.||.||.|||||.|||||..|.||.|||||||||.|||..|||
BL00681___ypw 407 TCATCGACTTTAAAAAACGGTTTATCTCATACTGGGGATATGAAGGCCAT 456
BSNT_03290___ 457 CCTTATGATGCATTGCTTGATTTGTTTGAGCCCGGCGTCACGGT---AAA 503
||||||.|..|..|.||.||....|..||.||.|||||.||.|| |||
BL00681___ypw 457 CCTTATAACACGCTTCTGGACCAATACGAACCAGGCGTTACAGTCGAAAA 506
BSNT_03290___ 504 GGTGCTTGATCAGCTGTTTACTGAGCTGAAGGAAGCGGTTATC---CCTC 550
|||.||....||.|||.||||..||..||| ||.|||| ||.|
BL00681___ypw 507 ---GCTCGACGCCCTTTTTTCTGAATTGCGGGA---GGCTATCGTTCCGC 550
BSNT_03290___ 551 TTGTTAAACAGGTGACAGCTTCCGGAAATAAA---CCAGATACAAGCTTT 597
||||..||.| ||..||..||.|..||||| ||.|||||..|||||
BL00681___ypw 551 TTGTGCAAAA---GATTGCCGCCAGTGATAAAAAGCCTGATACGGGCTTT 597
BSNT_03290___ 598 CTTACAAAAGCG-----TTCCCGAAAGAAAAGCAAAAAGAGCTCAGTCTG 642
.|| || || |||||||||||...|| ||.||...||.||
BL00681___ypw 598 GTT-CA----CGATCATTTCCCGAAAGAGCGGC----AGCGCGATGTTTG 638
BSNT_03290___ 643 ----TATTTTTTACAGGAGCTTGGCTACGATTTTGATGGC-GGAAGACTT 687
|..||.|||||||||||.|||||.|||||||| ||| ||..|.||.
BL00681___ypw 639 CCACTTCTTCTTACAGGAGCTGGGCTATGATTTTGA-GGCGGGGCGCCTG 687
BSNT_03290___ 688 GATGAAACCGTTCATCCGTTTGCAACTACGCTGA--ATCGG----GGAGA 731
|||||.||.|||||||| |||.|| |.||| |||.| ||.||
BL00681___ypw 688 GATGAGACGGTTCATCC-TTTCCA-----GGTGACGATCAGCCAAGGGGA 731
BSNT_03290___ 732 CGTTCGGGTCACGACGAG-ATATGATGAAAAAGATTTCCGGACGGCGATC 780
.|..|||||.||.|| || |||..|||||||.|||||.|||.||||..|.
BL00681___ypw 732 TGCCCGGGTGACCAC-AGCATACAATGAAAACGATTTTCGGTCGGCTGTT 780
BSNT_03290___ 781 TTTGGCACCATTCATGAGTGCGGGCACGCGATTTACGAGCAAAATATTGA 830
||.||.||.||||||||.|||||.||.||.|||||.||.||.||.|||||
BL00681___ypw 781 TTCGGAACAATTCATGAATGCGGCCATGCCATTTATGAACAGAACATTGA 830
BSNT_03290___ 831 TGAAGCACTCAGTGGCACGAATTTGTCAGACGGCGCATCAATGGGAATTC 880
||||||.||..|.||.||.|||||.||||||||||||||||||||.||||
BL00681___ypw 831 TGAAGCGCTGGGCGGAACCAATTTATCAGACGGCGCATCAATGGGCATTC 880
BSNT_03290___ 881 ATGAATCGCAATCATTATTTTACGAGAATTTTATCGGC-CGCAAC-AAGC 928
|||||||.|||||..|.||.||.|||||.||||||||| .|||.| ||||
BL00681___ypw 881 ATGAATCTCAATCCCTTTTCTATGAGAACTTTATCGGCAGGCATCAAAGC 930
BSNT_03290___ 929 ATTTTTGGACACCGTACTATCAGAAGATTCAAGAAGCATCACCTGAACAG 978
||||||||.|.|||.|.|.|.||.||..|.||||||...|||||.|||
BL00681___ypw 931 --TTTTGGACGCGGTATTTTGATAAAATAAAGGAAGCAAGCCCTGACCAG 978
BSNT_03290___ 979 TT--CAAGGACAT--CTCCCTGGATGATTTTGTCCGGGCAATCAATGAAT 1024
|| || |.|.| ||.|| ||.|..||...|.|.||..|.|||||||
BL00681___ypw 979 TTTGCA--GGCGTTACTGCC--GAAGGGTTCTACAGAGCCGTTAATGAAT 1024
BSNT_03290___ 1025 CAAAACCTTCATTTATCAGGGTCGAAGCGGATGAATTAACGTATCCTCTT 1074
||||.||.||..|.||..||.||||.||.||||||.|.||.|||||.||.
BL00681___ypw 1025 CAAAGCCGTCGCTGATTCGGATCGAGGCTGATGAACTGACATATCCGCTG 1074
BSNT_03290___ 1075 CATATCATCATCCGTTATGAAATTGAAAAAGCGATTTTTAGCAATGAAGT 1124
|||||.||.|||||.|||||||||||||||||||||||.|||...|||||
BL00681___ypw 1075 CATATTATGATCCGCTATGAAATTGAAAAAGCGATTTTCAGCGGCGAAGT 1124
BSNT_03290___ 1125 GTCTGTGGAAGATCTGCCGTCGCTCTGGAATCAAAAATACCAGGATTATT 1174
.||.||.|.|||.||.||....||.||||||.|.|||||..|.|..||..
BL00681___ypw 1125 ATCGGTCGGAGACCTTCCAAAACTATGGAATGACAAATATGAAGCATACC 1174
BSNT_03290___ 1175 TAGGGATTACACCGCAGACCGAC---GCAGAGGGGATTTTACAGGACGTC 1221
|.||.|||||.||.| ||||| ||..|.||.||..|.|||||.|||
BL00681___ypw 1175 TGGGCATTACGCCTC---CCGACGATGCTAAAGGAATCCTGCAGGATGTC 1221
BSNT_03290___ 1222 CATTGGGCAGGTGGAGATTTCGGCTACTTCCCATCCTATGCGCTCGGCTA 1271
||||||.|.||.|||||||||||.||.||.||.||.||||||||.||.||
BL00681___ypw 1222 CATTGGTCCGGCGGAGATTTCGGTTATTTTCCTTCATATGCGCTTGGATA 1271
BSNT_03290___ 1272 CATGTATGCGGCTCAGCTGAAACAAAAAATGCTTGAGGATCTCCCTGAAT 1321
.||||||||||||||.|||||...||..|||||..|.|||||.||.||.|
BL00681___ypw 1272 TATGTATGCGGCTCAACTGAAGTCAAGCATGCTGAAAGATCTTCCGGAGT 1321
BSNT_03290___ 1322 TTGACGCTCTCTTGGAAAGAGGAGAGTTCCATCCGAT---AAAGCAATGG 1368
|||||..|||..|.||||..||.||.||.||.||||| |||| |||
BL00681___ypw 1322 TTGACCGTCTGATTGAAAACGGCGATTTTCAACCGATCAGAAAG---TGG 1368
BSNT_03290___ 1369 CTGACGGAAAAGGTGCACATTCACGGAAAACGGAAAAAGCCGTTAGACAT 1418
|||||.||..|.||.|||||.|||||.|||.|.|||||.|||.|.||.||
BL00681___ypw 1369 CTGACAGAGCATGTACACATCCACGGCAAAAGAAAAAAACCGCTGGAAAT 1418
BSNT_03290___ 1419 TATTAAAGATGCAACAGGAGAAGAGCTGAATGTTCGCTATTTAATTGATT 1468
.||||||..|||.|||||.|||||..|.||.||.||..|||||||....|
BL00681___ypw 1419 CATTAAATCTGCGACAGGCGAAGAATTAAACGTCCGTCATTTAATCCGCT 1468
BSNT_03290___ 1469 ATTTATCAAACAAATATTCAAATCTCTATCTGTCATAA 1506
||.|...|.|.||||||.|||..||||||.|||.|
BL00681___ypw 1469 ATCTGGAAGAAAAATATACAACACTCTATTTGTAA--- 1503
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