Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03448 and BL00662
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:26
# Commandline: needle
# -asequence dna-align/BSNT_03448___rluB.1.5803.seq
# -bsequence dna-align/BL00662___rluB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03448___rluB-BL00662___rluB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03448___rluB-BL00662___rluB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03448___rluB
# 2: BL00662___rluB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 749
# Identity: 560/749 (74.8%)
# Similarity: 560/749 (74.8%)
# Gaps: 28/749 ( 3.7%)
# Score: 2037.5
#
#
#=======================================
BSNT_03448___ 1 ATGGAAAGACTGCAAAAAGTGATTGCTCATGCCGGAGTTGCGTCGCGCAG 50
||||||.||||.||||||||.||.||.||.|||||..|.||.|||.|..|
BL00662___rlu 1 ATGGAACGACTTCAAAAAGTAATCGCCCACGCCGGTATCGCATCGAGGCG 50
BSNT_03448___ 51 AAAGGCAGAAGAGCTGATTAAAGAAGGAAAAGTAAAGGTGAATGGCAAAG 100
.|||||.||.|||||.||.||||||||.|.|||.|.|||.||.||||||.
BL00662___rlu 51 GAAGGCGGAGGAGCTTATAAAAGAAGGGAGAGTCACGGTCAACGGCAAAA 100
BSNT_03448___ 101 TAGTAACAGAGCTAGGTGTTAAGGTCACCGGTTCTGATCAGATTGAGGTA 150
..||.|.||||||.||.|||||.||..|..|.||.||||.||||||||||
BL00662___rlu 101 CCGTCAGAGAGCTTGGCGTTAAAGTATCAAGCTCCGATCGGATTGAGGTA 150
BSNT_03448___ 151 AACGGGTTAAAGGTTGAACGCGAAGAGCCGGTTTACTTTCTCTTATATAA 200
|||||..|..||.|||||.|||||||.||.|||||.||||||.|.|||||
BL00662___rlu 151 AACGGCGTCCAGCTTGAAAGCGAAGAACCCGTTTATTTTCTCCTGTATAA 200
BSNT_03448___ 201 ACCAAGAGGCGTTATTTCCGCAGCGCAAGATGATAAAGGACGCAAAGTGG 250
|||.|||||.|||||.||.||||...||||.||.|||||.||.|||||.|
BL00662___rlu 201 ACCGAGAGGGGTTATATCAGCAGTTAAAGACGACAAAGGCCGGAAAGTTG 250
BSNT_03448___ 251 TGACGGACTTTTTTAAAAATATTCC--------GCAGCGCATTTATCCGA 292
||||.||||||||.| || |.||||.||||||||||
BL00662___rlu 251 TGACCGACTTTTTCA--------CCGAGGTGGAGGAGCGGATTTATCCGA 292
BSNT_03448___ 293 TTGGGCGTCTGGACTATGATACGAGCGG--TCTT-TTGCTTTTAACCAAT 339
|.||..|.||.||.|||||||||||||| |||| |||| ||||.|||
BL00662___rlu 293 TCGGAAGGCTTGATTATGATACGAGCGGCCTCTTATTGC---TAACGAAT 339
BSNT_03448___ 340 GACGGCGAATTCGCCAATAAGCTGATGCACCCTAAGTATGAAATAGACAA 389
|||||.||.|||||||||||..||||||||||.||.||.|||||..|.||
BL00662___rlu 340 GACGGGGACTTCGCCAATAAATTGATGCACCCGAAATACGAAATTAATAA 389
BSNT_03448___ 390 AACATACGTGGCGAAGGTGAAAGGAATCCCGCCTAAA-GAGCTGCTCAGA 438
|||.||.||.||.|||.|||||||.||.|| ..|||| |||....|.|.|
BL00662___rlu 390 AACGTATGTAGCAAAGCTGAAAGGCATTCC-TTTAAAGGAGAATTTAAAA 438
BSNT_03448___ 439 AAGCTGGAGCGCGGAATTAGGCTGGAAGAAGGCAAAACAGCGCCTGCTAA 488
||.||.|||||.||..|..|.||.||.||.||.||.|||||.|||||.||
BL00662___rlu 439 AAACTTGAGCGGGGCGTGCGCCTTGAGGATGGAAAGACAGCTCCTGCAAA 488
BSNT_03448___ 489 AGCGAAGCTGCTGTC-CTTGGATAAGAAAAAGCAGACAAGCATTATTCAG 537
||.||||||..|||| ||| |||||||||||||||||||||||..|.||.
BL00662___rlu 489 AGTGAAGCTTTTGTCGCTT-GATAAGAAAAAGCAGACAAGCATCGTCCAA 537
BSNT_03448___ 538 CTGACGATCCATGAGGGACGCAACAGACAGGTGCGCCGCATGTTTGAAGC 587
.|.||||||||||||||.||.|||.|.|||||..|..|.|||||||||||
BL00662___rlu 538 ATCACGATCCATGAGGGGCGAAACCGCCAGGTCAGGAGAATGTTTGAAGC 587
BSNT_03448___ 588 GATCGGACATGAGGTAATCAAGCTGAAGCGTGAGGAATACGCGTTTTTAA 637
.||||||||.|||||..||||||||||..|.||.||.||.||.|||||.|
BL00662___rlu 588 CATCGGACACGAGGTGCTCAAGCTGAAAAGGGAAGAGTATGCTTTTTTGA 637
BSNT_03448___ 638 ACCT-GCGAGGCCTGCACACGGGCGATGCCAGAGAGCTTACGCCTCACGA 686
|||| ||| |||.||.|.||.||.||....|||||||||||||||||.||
BL00662___rlu 638 ACCTGGCG-GGCTTGAAAACAGGGGAAAAAAGAGAGCTTACGCCTCATGA 686
BSNT_03448___ 687 AGTAAAAAGGCTCAGAGCACTGGCGGATCACGGTAAAAACGCTTTCTAA 735
|||.|||||||||||.|||.||||.||.|||||||||...|||||||||
BL00662___rlu 687 AGTCAAAAGGCTCAGGGCATTGGCAGAACACGGTAAAGCGGCTTTCTAA 735
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