Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03441 and BL00659
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:26
# Commandline: needle
# -asequence dna-align/BSNT_03441___resC.1.5803.seq
# -bsequence dna-align/BL00659___resC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03441___resC-BL00659___resC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03441___resC-BL00659___resC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03441___resC
# 2: BL00659___resC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1231
# Identity: 881/1231 (71.6%)
# Similarity: 881/1231 (71.6%)
# Gaps: 110/1231 ( 8.9%)
# Score: 3086.5
#
#
#=======================================
BSNT_03441___ 1 ATGGCAGAGCTGAGCGGAAATTTTCTTTATGCGGCCTTTCTTGTGTATTT 50
|||||||||.|.|||||.|||||..|.||.|||||.|||||..|||||
BL00659___res 1 ATGGCAGAGTTAAGCGGCAATTTATTGTACGCGGCATTTCTCTTGTAT-- 48
BSNT_03441___ 51 AATCGCTGTC-CCGATCTTC------GGCGGGGCCATACGCGGGAATAAA 93
||.|| .||.||||| |||||..|||| |.|||..||.
BL00659___res 49 -----CTCTCAGCGGTCTTCTTTTTTGGCGGCTCCAT---CAGGAGCAAG 90
BSNT_03441___ 94 G------------ATAAAAAGGGCAGGCCAAACCGATGGGC--------C 123
| |.||.||| |||||.||||| |
BL00659___res 91 GCTTCAGACCGGAAGAAGAAG---------AACCGCTGGGCATCGATCGC 131
BSNT_03441___ 124 AACATTGGAATCACTCTTTCTATTGTCGGTTTTTTCTGCCACCTTGGATA 173
|...||| |||| |.||..||||.|||.|.|||||..|||||||
BL00659___res 132 AGTGTTG--ATCA------CGATCATCGGATTTGTATGCCAGTTTGGATA 173
BSNT_03441___ 174 TTTCATCACAAGGTGG---GCTGCCAGCGGCCATGCGCCGGTCAGCAATA 220
|||.||..|.||.||| |.|.| |||.||.|||||||||||||||.
BL00659___res 174 TTTTATTGCGAGATGGATCGTTTC---CGGACACGCGCCGGTCAGCAATC 220
BSNT_03441___ 221 TGTTTGAATTCACCACCGCTTTTGGCATGATGCTTGTTTTGGCGTTTATC 270
|.||||||||.||.||.|||||..||||||||||.||..|||||||.|||
BL00659___res 221 TCTTTGAATTTACAACTGCTTTCAGCATGATGCTCGTCCTGGCGTTCATC 270
BSNT_03441___ 271 ATTCTTTATTTTCTCTATAGATTGCCTTCATTAGGCCTGTTTACGC---- 316
||..|.||.|||.|.||.|...||.|..||||.||.||||||||||
BL00659___res 271 ATCATCTACTTTATTTACAAGCTGTCCGCATTGGGACTGTTTACGCTTCC 320
BSNT_03441___ 317 ---TGTCAATTGCTTTATTGCTGATTGCCTACGCCAGCATGTTTCCGACA 363
|||| .|||||| ||||.||.||.|||||||||||||||||.
BL00659___res 321 CGTTGTC--CTGCTTT-----TGATCGCATATGCCAGCATGTTTCCGACC 363
BSNT_03441___ 364 GATATCTCGCCTTTAATTCCTTCGCTCCAAAGCAACTGGCTGTATATTCA 413
||||||.|.||..|.|||||.|||||.|||||||||||||||||||||||
BL00659___res 364 GATATCACACCGCTGATTCCGTCGCTTCAAAGCAACTGGCTGTATATTCA 413
BSNT_03441___ 414 TGTAACAACGGCCGCGCTTGGGCAAGCTATACTTGCCATCAGCTTTGTCG 463
|||.||.||.||.||.||.|||||.||.||.||.||||||||||||||||
BL00659___res 414 TGTCACGACTGCAGCCCTCGGGCAGGCGATTCTCGCCATCAGCTTTGTCG 463
BSNT_03441___ 464 CTGGTGTCATCTTTCTTTTGAAGCATGTAGACCAGACAAAGCCAAGCAAA 513
|.||.||.||||||||..|.||||||||.||.||..|||||||..|||||
BL00659___res 464 CCGGCGTGATCTTTCTGCTCAAGCATGTGGATCATTCAAAGCCGGGCAAA 513
BSNT_03441___ 514 AAGACCTTCTGGCTTGAA-GCGATTATGTTTATCCTGGTCACAACCGTCG 562
||.||.||||||||.||| |.| |.||||||||.||.||.|||||..|||
BL00659___res 514 AAAACGTTCTGGCTCGAATGTG-TCATGTTTATGCTTGTGACAACGCTCG 562
BSNT_03441___ 563 CCTTTA---TTGCAATCACATCAGCATTTCGTCTTGCAGGCTATGAAGCG 609
|.|||| ||| |.||..|..||||.||..|||..||||||||.|||
BL00659___res 563 CGTTTATCCTTG---TGACGACCTCATTCCGCATTGGGGGCTATGAGGCG 609
BSNT_03441___ 610 GAGTTTAACTGGGTGGACAAAAGTAAAGAAA------AAGGCGTGATGGT 653
.|||||||.|||.|.|| ||||||.| |||.|||.|||.|
BL00659___res 610 CAGTTTAAGTGGATTGA------TAAAGACAACCAGGAAGACGTCATGAT 653
BSNT_03441___ 654 GTACGAAATGCCCGCGCTTGTCGGTCCGCATCAGGGAGAGCTTTTGACCG 703
.|||||..|.|||||.|||.||||.|||.||.|.|||||.||||| |.||
BL00659___res 654 TTACGAGCTTCCCGCTCTTATCGGCCCGAATAAAGGAGAACTTTT-AACG 702
BSNT_03441___ 704 AAGGA-AGAATGAAACCGCTTGTTGATCTTCCCGCGC-TTTTCTCAGGCA 751
.|||| ||||||.|.||||||||..|| .|.||||.| ||||.||||||.
BL00659___res 703 GAGGAGAGAATGGAGCCGCTTGTCAAT-GTGCCGCCCATTTTTTCAGGCC 751
BSNT_03441___ 752 GAAAAGTGAACACTGTCATTTGGTCATTTGGAGCAG--GTCTTGTGTTGT 799
|.||..||||.||.||..|.|||||.||||||.|.| |.|| ||.|.|
BL00659___res 752 GGAAGCTGAATACCGTTCTCTGGTCGTTTGGAACCGGCGCCT--TGCTTT 799
BSNT_03441___ 800 ATGGGGCTC-TCCGTCTGATCATCAGAAAAAGAATCAG--CGCTCTATTA 846
|.||.| || ||.|.|||||||||||||||.|.||||| .||| |.||
BL00659___res 800 ACGGTG-TCATCAGGCTGATCATCAGAAAACGCATCAGTCAGCT-TCTT- 846
BSNT_03441___ 847 CATCCGCTGGTGAAAAACGTCAATCTTGATCTGGTGGATGAGGTTGGGTA 896
||.|||||.||||||||.||.||.|||||.||.||.|||||..|.||.||
BL00659___res 847 CAGCCGCTCGTGAAAAATGTGAACCTTGACCTTGTCGATGAAATCGGCTA 896
BSNT_03441___ 897 CAGGGCCGTATCAATCGGATTTCCGATCTTTACACTCGGCGCGCTGATCT 946
..|..||||.||.|||||.||||||.|.|||||.||.||||||||.||.|
BL00659___res 897 TCGCTCCGTTTCGATCGGCTTTCCGGTTTTTACGCTTGGCGCGCTTATTT 946
BSNT_03441___ 947 TTGCAATGATTTGGGCTCAGCTTGCGTGGACCAGGTTTTGGGGCTGGGAC 996
|.||.|||||.|||||.|||||.|||||||.|||.||.|||||||||||.
BL00659___res 947 TCGCGATGATATGGGCACAGCTGGCGTGGAGCAGATTCTGGGGCTGGGAT 996
BSNT_03441___ 997 CCTAAGGAAGTATGGGCGCTGATCACATTTTTGTTCTATGCCGCTTACTT 1046
||.||.|||||.|||||||||||.|||||||||||.|||||.|||||..|
BL00659___res 997 CCGAAAGAAGTCTGGGCGCTGATTACATTTTTGTTTTATGCAGCTTATCT 1046
BSNT_03441___ 1047 GCATTTAAGACTGTCAAGAGGCTGGCACGGTGAGAAGTCAGCATGGCTGG 1096
||||.|.||.||.||.||||||||||||||.||.||.||.||.|||||.|
BL00659___res 1047 GCATCTCAGGCTTTCGAGAGGCTGGCACGGCGAAAAATCGGCGTGGCTCG 1096
BSNT_03441___ 1097 CCGTAATCGGTTTTGCTATTATTATGTTTAATTTAATATTCGTAAATCTT 1146
||||.|||||||||||.|||||||||||||||.|.||.||.|||||.|||
BL00659___res 1097 CCGTCATCGGTTTTGCCATTATTATGTTTAATCTTATTTTTGTAAACCTT 1146
BSNT_03441___ 1147 GTGCTTGCCGGACTTCATTCTTATGCATAG- 1176
|||.|.|||||.|||||.|||||||||| |
BL00659___res 1147 GTGATCGCCGGGCTTCACTCTTATGCAT-GA 1176
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