Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03437 and BL00651
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence dna-align/BSNT_03437___sigX.1.5803.seq
# -bsequence dna-align/BL00651___sigX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03437___sigX-BL00651___sigX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03437___sigX-BL00651___sigX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03437___sigX
# 2: BL00651___sigX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 591
# Identity: 445/591 (75.3%)
# Similarity: 445/591 (75.3%)
# Gaps: 12/591 ( 2.0%)
# Score: 1597.5
#
#
#=======================================
BSNT_03437___ 1 ATGGAAGAAACCTTTCAATTATTATATGATACA-TATCATCAAGATTTGT 49
.||||||||||||||||...|.|||||||| || ||||||||.|||||.|
BL00651___sig 1 GTGGAAGAAACCTTTCAGAAAATATATGAT-CAGTATCATCAGGATTTAT 49
BSNT_03437___ 50 ACCAATTTTTATTTTATATGGTAAAGGATAAAAACCAGACAGAAGACCTT 99
..||.||||||||||||||||||||.||.|||||.|||.|.||||||.|.
BL00651___sig 50 TTCAGTTTTTATTTTATATGGTAAAAGACAAAAATCAGGCGGAAGACTTA 99
BSNT_03437___ 100 CTTCAAGAGGTTTATATCCGGGTATTAAATTCTTATCATACGTTTGAAGG 149
.||||.||.||.||.|||||.||..|..|||||||..|.||.||||||||
BL00651___sig 100 GTTCAGGAAGTATACATCCGCGTCCTGCATTCTTACGAAACATTTGAAGG 149
BSNT_03437___ 150 AAGAAGCAGTGAAAAAACATGGCTATTGTCTATCGCACGCCATGTTGCGA 199
.||.|||||.||||||||.|||||..|.||.||.||.||.||.|||||||
BL00651___sig 150 CAGGAGCAGCGAAAAAACCTGGCTTCTTTCGATTGCGCGGCACGTTGCGA 199
BSNT_03437___ 200 TAGACTGGTTCCGTAAACAGCAAACAATCAGACAGCGTATACTCGGTACA 249
|.|||||||||.|.||.|||||.||.|||.|.|||||.||..|.||.||.
BL00651___sig 200 TCGACTGGTTCAGAAAGCAGCAGACGATCCGCCAGCGGATTTTGGGGACG 249
BSNT_03437___ 250 TTTGACTGGGATACACAGGATGTCAGGGATCAGCAATTG---CTACCGGA 296
|||||||||||.|.|||.|||||.|..|| |.|||| | ||.||.||
BL00651___sig 250 TTTGACTGGGAGAAACAAGATGTAAAAGA-CCGCAA--GCCTCTGCCTGA 296
BSNT_03437___ 297 CGAACTTGCCGTTCAACATGAAAATGTCCGGGAAATTTATGCTGCGCTTG 346
.||..|.|...|.|||.|||||||..|...||||||||..|..||.||.|
BL00651___sig 297 GGACATCGTGATGCAAAATGAAAACCTAAAGGAAATTTTCGAGGCCCTAG 346
BSNT_03437___ 347 ATCAA-TGTACAATCGATCAAAGAGCTGTGATTATCTTGCGGTTTATTCA 395
| ||| |||||..|.||.||||||.|.||.||..|||||||.||||||||
BL00651___sig 347 A-CAAGTGTACGCTTGACCAAAGATCAGTTATCGTCTTGCGTTTTATTCA 395
BSNT_03437___ 396 GGGATATTCAATACAG-GAAACAGCCAAGGCTCTGCGCTTCTCGGAAAGC 444
.||||||||.|| ||| ||||||||.||.||..||...||.||.||||||
BL00651___sig 396 AGGATATTCGAT-CAGTGAAACAGCAAAAGCCTTGAATTTTTCCGAAAGC 444
BSNT_03437___ 445 AAAGTAAAAACGACCCAACACAGAGGGCTCAAAGTACTTCGGAAACATAT 494
||.||||||||.||.||.|||.|.||.||.|||||.|||||.|||||.||
BL00651___sig 445 AAGGTAAAAACCACTCAGCACCGCGGTCTGAAAGTGCTTCGTAAACAGAT 494
BSNT_03437___ 495 GGAGCTTTTGAGGGAGGAGCTAATGGATGATGAAGTCAGAATGGAACGAA 544
|||||||||||.||||||.|.||.|.||||.|||||||||||||||||||
BL00651___sig 495 GGAGCTTTTGAAGGAGGATCCAAAGAATGAAGAAGTCAGAATGGAACGAA 544
BSNT_03437___ 545 GAACAGATAAAGGAGTTGTTAAGTCAACTTCCGGCAGTTAA 585
||||.|.|.||||.|||..||||.||||||||..|.|||||
BL00651___sig 545 GAACGGCTGAAGGCGTTACTAAGCCAACTTCCAACGGTTAA 585
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