Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03437 and BL00651

See Amino acid alignment / Visit BSNT_03437 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:25
# Commandline: needle
#    -asequence dna-align/BSNT_03437___sigX.1.5803.seq
#    -bsequence dna-align/BL00651___sigX.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03437___sigX-BL00651___sigX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03437___sigX-BL00651___sigX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03437___sigX
# 2: BL00651___sigX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 591
# Identity:     445/591 (75.3%)
# Similarity:   445/591 (75.3%)
# Gaps:          12/591 ( 2.0%)
# Score: 1597.5
# 
#
#=======================================

BSNT_03437___      1 ATGGAAGAAACCTTTCAATTATTATATGATACA-TATCATCAAGATTTGT     49
                     .||||||||||||||||...|.|||||||| || ||||||||.|||||.|
BL00651___sig      1 GTGGAAGAAACCTTTCAGAAAATATATGAT-CAGTATCATCAGGATTTAT     49

BSNT_03437___     50 ACCAATTTTTATTTTATATGGTAAAGGATAAAAACCAGACAGAAGACCTT     99
                     ..||.||||||||||||||||||||.||.|||||.|||.|.||||||.|.
BL00651___sig     50 TTCAGTTTTTATTTTATATGGTAAAAGACAAAAATCAGGCGGAAGACTTA     99

BSNT_03437___    100 CTTCAAGAGGTTTATATCCGGGTATTAAATTCTTATCATACGTTTGAAGG    149
                     .||||.||.||.||.|||||.||..|..|||||||..|.||.||||||||
BL00651___sig    100 GTTCAGGAAGTATACATCCGCGTCCTGCATTCTTACGAAACATTTGAAGG    149

BSNT_03437___    150 AAGAAGCAGTGAAAAAACATGGCTATTGTCTATCGCACGCCATGTTGCGA    199
                     .||.|||||.||||||||.|||||..|.||.||.||.||.||.|||||||
BL00651___sig    150 CAGGAGCAGCGAAAAAACCTGGCTTCTTTCGATTGCGCGGCACGTTGCGA    199

BSNT_03437___    200 TAGACTGGTTCCGTAAACAGCAAACAATCAGACAGCGTATACTCGGTACA    249
                     |.|||||||||.|.||.|||||.||.|||.|.|||||.||..|.||.||.
BL00651___sig    200 TCGACTGGTTCAGAAAGCAGCAGACGATCCGCCAGCGGATTTTGGGGACG    249

BSNT_03437___    250 TTTGACTGGGATACACAGGATGTCAGGGATCAGCAATTG---CTACCGGA    296
                     |||||||||||.|.|||.|||||.|..|| |.||||  |   ||.||.||
BL00651___sig    250 TTTGACTGGGAGAAACAAGATGTAAAAGA-CCGCAA--GCCTCTGCCTGA    296

BSNT_03437___    297 CGAACTTGCCGTTCAACATGAAAATGTCCGGGAAATTTATGCTGCGCTTG    346
                     .||..|.|...|.|||.|||||||..|...||||||||..|..||.||.|
BL00651___sig    297 GGACATCGTGATGCAAAATGAAAACCTAAAGGAAATTTTCGAGGCCCTAG    346

BSNT_03437___    347 ATCAA-TGTACAATCGATCAAAGAGCTGTGATTATCTTGCGGTTTATTCA    395
                     | ||| |||||..|.||.||||||.|.||.||..|||||||.||||||||
BL00651___sig    347 A-CAAGTGTACGCTTGACCAAAGATCAGTTATCGTCTTGCGTTTTATTCA    395

BSNT_03437___    396 GGGATATTCAATACAG-GAAACAGCCAAGGCTCTGCGCTTCTCGGAAAGC    444
                     .||||||||.|| ||| ||||||||.||.||..||...||.||.||||||
BL00651___sig    396 AGGATATTCGAT-CAGTGAAACAGCAAAAGCCTTGAATTTTTCCGAAAGC    444

BSNT_03437___    445 AAAGTAAAAACGACCCAACACAGAGGGCTCAAAGTACTTCGGAAACATAT    494
                     ||.||||||||.||.||.|||.|.||.||.|||||.|||||.|||||.||
BL00651___sig    445 AAGGTAAAAACCACTCAGCACCGCGGTCTGAAAGTGCTTCGTAAACAGAT    494

BSNT_03437___    495 GGAGCTTTTGAGGGAGGAGCTAATGGATGATGAAGTCAGAATGGAACGAA    544
                     |||||||||||.||||||.|.||.|.||||.|||||||||||||||||||
BL00651___sig    495 GGAGCTTTTGAAGGAGGATCCAAAGAATGAAGAAGTCAGAATGGAACGAA    544

BSNT_03437___    545 GAACAGATAAAGGAGTTGTTAAGTCAACTTCCGGCAGTTAA    585
                     ||||.|.|.||||.|||..||||.||||||||..|.|||||
BL00651___sig    545 GAACGGCTGAAGGCGTTACTAAGCCAACTTCCAACGGTTAA    585


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