Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04082 and BL00644
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:08
# Commandline: needle
# -asequence dna-align/BSNT_04082.1.5803.seq
# -bsequence dna-align/BL00644.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04082-BL00644.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04082-BL00644.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04082
# 2: BL00644
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 129/194 (66.5%)
# Similarity: 129/194 (66.5%)
# Gaps: 4/194 ( 2.1%)
# Score: 390.5
#
#
#=======================================
BSNT_04082 1 --GTGAAGAAACGTTTCAGCTCTTATTCGCTGCCGCCATGGGTAAGGCAA 48
|.|||.||| .||||.|.|.|||||..|.|.|||.|||.|.|.||||
BL00644 1 ATGCGAAAAAA--ATTCAACACATATTCATTCCAGCCGTGGCTGAAGCAA 48
BSNT_04082 49 ATTCGGCTTGTATCCGCACAAGTGATTATTCCCATTACGATTTTTCAAGG 98
.|..|||||||..|.|..|||||..|..|.||.||||||||.||.||.||
BL00644 49 GTCAGGCTTGTTGCTGTTCAAGTCGTCCTCCCGATTACGATATTCCAGGG 98
BSNT_04082 99 AATCAGAACCATTTTCTTTCCGACAACCTTTGATGTTTTGCTGCTCGCAA 148
.|||.|.||.||..|||||||.||.||.||||||||..|.||..|.|..|
BL00644 99 CATCCGCACGATCATCTTTCCTACCACATTTGATGTCCTCCTTTTGGGCA 148
BSNT_04082 149 TCCTAATCTTTTTAGCTTGCGCCCTTCATTTAGAATGGATATAA 192
|.||.||.||..|.||.||||||.||||..|.||.|||||.|||
BL00644 149 TTCTCATATTCCTTGCGTGCGCCTTTCACCTTGACTGGATTTAA 192
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