Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04064 and BL00640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:07
# Commandline: needle
# -asequence dna-align/BSNT_04064___minC.1.5803.seq
# -bsequence dna-align/BL00640___minC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04064___minC-BL00640___minC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04064___minC-BL00640___minC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04064___minC
# 2: BL00640___minC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 706
# Identity: 533/706 (75.5%)
# Similarity: 533/706 (75.5%)
# Gaps: 41/706 ( 5.8%)
# Score: 2016.5
#
#
#=======================================
BSNT_04064___ 1 GTGAATATTGTGAAGACCAAAAAGCAGCAATATGTAACAATAAAAGGAAC 50
|||||||||.|||||||||||||.||||||||.||||||||
BL00640___min 1 ---------GTGAAGACCCAAAAGCAGCAATACGTAACAATTAAAGGAAC 41
BSNT_04064___ 51 AAAGAATGGACTAACATTGCATCTGGATGATGCGTGTTCTTTTGATGAGC 100
.||.||||||.|.||..|.|||||.|||||..|.||.||||||||.|| .
BL00640___min 42 GAAAAATGGATTGACGCTTCATCTTGATGACACATGCTCTTTTGAAGA-A 90
BSNT_04064___ 101 TTCTCG-ATGGTCTTCAGAATATGCTGTCAATTGAACAATATACCGATGG 149
||.|.| |.|||||||||.|||||||||||.|.|||||.||||..|||||
BL00640___min 91 TTATTGTACGGTCTTCAGGATATGCTGTCACTCGAACATTATATGGATGG 140
BSNT_04064___ 150 AAAAGGCCAGAAAATCAGCGTTCATGTTAAGCTGGGAAATCGCTTTTTAT 199
|||||||||||||||||..||||..||||||||.||..|.||| |||
BL00640___min 141 AAAAGGCCAGAAAATCAATGTTCTCGTTAAGCTCGGCCACCGC----TAT 186
BSNT_04064___ 200 AT----AAGGAGCAAGAGGAACAG---CTAACCGAATTGAT---TGCGTC 239
.| .|||||||| |||||| ||.|||||..|||| ||.|
BL00640___min 187 GTGACCGAGGAGCAA---GAACAGATCCTGACCGATGTGATCACTGAG-- 231
BSNT_04064___ 240 AAAGAAAGATTTGTTTGTTCATTCTATTGACAGTGAAGTCATTACTAAAA 289
|||.||| ||.||||..|.||.||.|||||.|||||||||||.||.|||.
BL00640___min 232 AAACAAA-ATCTGTTCATCCACTCCATTGAAAGTGAAGTCATGACCAAAG 280
BSNT_04064___ 290 AAGAAGCACAGCAGATAAGAGAGGAAGCCGAAATTATTTCTGTTTCAAAA 339
|.||||||.|.|...|||.||.||||..|||||||||||||||..|.||.
BL00640___min 281 ATGAAGCAAACCGCTTAAAAGCGGAAAGCGAAATTATTTCTGTCGCTAAG 330
BSNT_04064___ 340 ATTGTCCGTTCAGGCCAAGTGCTGCAGGTAAAA-----GGCGACTTGCTC 384
|||||||||||.||.|||||.|| |.||| ||.||.|||||.
BL00640___min 331 ATTGTCCGTTCCGGGCAAGTCCT-----TGAAACGGAGGGTGATTTGCTT 375
BSNT_04064___ 385 CTGATCGGTGACGTGAATCCCGGCGGAACAGTCAGGGCCGGAGGGAACAT 434
||.||.||.||.||||||||.||.||||..||.|..|||||||||||.||
BL00640___min 376 CTCATTGGGGATGTGAATCCGGGAGGAATGGTGAAAGCCGGAGGGAATAT 425
BSNT_04064___ 435 TTTTGTTCTGGGCTCACTGAAAGGAATCGCGCATGCCGGATTTAATGGAA 484
|||..|.||.||||||.|.|.|||.||.||.||.|||||.||||||||||
BL00640___min 426 TTTCATCCTCGGCTCATTAAGAGGGATTGCCCACGCCGGTTTTAATGGAA 475
BSNT_04064___ 485 ATAATCAAGCGGTCATCGCCGCCTCTGAAATGCTTCCGACACAATTAAGA 534
||||.|.|||.||.||.||.||.||.||.|||...|||||.|||||..|.
BL00640___min 476 ATAAACGAGCTGTTATTGCGGCTTCGGATATGAGACCGACTCAATTGCGT 525
BSNT_04064___ 535 ATCAATCATGTGTTAAATCGCTCCCCAGACCACATTCAAAAAGGGAACGA 584
||||||||||||.|.|||||||||||||||.||||.|||.||||||||||
BL00640___min 526 ATCAATCATGTGCTCAATCGCTCCCCAGACAACATCCAAGAAGGGAACGA 575
BSNT_04064___ 585 AATGGAATGTGCTTATTTAGATACAGACGGAAATATGGTCATTGAACGCC 634
.|||||||||||||||||||||..|.|.|..||||||||||||||.||||
BL00640___min 576 CATGGAATGTGCTTATTTAGATGAAAATGAGAATATGGTCATTGACCGCC 625
BSNT_04064___ 635 TTCAACATTTGGCTCATTTAAGACCTGATCTAACAAGGCTTGAGGGAGGA 684
||||.||.||.|||||||||||||||..|.||||||||||||||||||||
BL00640___min 626 TTCAGCAATTAGCTCATTTAAGACCTAGTTTAACAAGGCTTGAGGGAGGA 675
BSNT_04064___ 685 ATGTGA 690
||||.|
BL00640___min 676 ATGTAA 681
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