Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04071 and BL00635

See Amino acid alignment / Visit BSNT_04071 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:07
# Commandline: needle
#    -asequence dna-align/BSNT_04071___maf.1.5803.seq
#    -bsequence dna-align/BL00635___maf.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04071___maf-BL00635___maf.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04071___maf-BL00635___maf.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04071___maf
# 2: BL00635___maf
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 602
# Identity:     401/602 (66.6%)
# Similarity:   401/602 (66.6%)
# Gaps:          61/602 (10.1%)
# Score: 1278.5
# 
#
#=======================================

BSNT_04071___      1 ATGACAAAACCGTTAATACTTGCATCACAATCTCCGCGCAGGAAAGAACT     50
                     |||||...||.|.|.|||.|.||.||||||||.||.|||||.||.|||||
BL00635___maf      1 ATGACCCGACAGCTCATATTGGCTTCACAATCACCCCGCAGAAAGGAACT     50

BSNT_04071___     51 CCTCGATCTTCTCCAGCTGCCCTACTCCATTATTGTCAGTGAAGTAGAAG    100
                     |||||||||.||.|||.|.||.|||..|||..||...||..|.|..||||
BL00635___maf     51 CCTCGATCTCCTGCAGATTCCGTACAGCATCGTTACGAGCAATGCGGAAG    100

BSNT_04071___    101 AAAAATTAAATCGAAACTTTTCACCAGAAGAAAACGTCCAATGGTTGGCA    150
                     |||||||||.|||||||||||||||||.||||||||||.||||||||||.
BL00635___maf    101 AAAAATTAATTCGAAACTTTTCACCAGCAGAAAACGTCAAATGGTTGGCG    150

BSNT_04071___    151 AAACAAAAAGCTAAG-GCTGTAGCTGATCTCCACCCGCATGCAATCGTTA    199
                     .||||||||| |..| ||.|||||.||.|...|.||..||||..||||..
BL00635___maf    151 GAACAAAAAG-TGCGTGCAGTAGCCGAACAATATCCTGATGCCGTCGTGC    199

BSNT_04071___    200 TCGGTGCTGATACAATGGTATGCCTTGACGGCGAATGCCTT-----GGCA    244
                     |.||.||.||.||.||.||.|....||||||.|     |||     ||||
BL00635___maf    200 TTGGCGCCGACACCATTGTTTATTATGACGGAG-----CTTATTTGGGCA    244

BSNT_04071___    245 AACCGCAGGATCAAGAAGAAGCTGCTTCTATGCTGCGGAGGCTTTCAGGC    294
                     |.||..|.|||...|||||.||.|.....||||||.|.|.||||||.||.
BL00635___maf    245 AGCCCAAAGATGCCGAAGATGCAGAACGGATGCTGAGCATGCTTTCGGGA    294

BSNT_04071___    295 CGAAGTCACTCAGTAATAACCGCGGTCAGCATTCAA-----GCTGAAA-A    338
                     |..|..||.|||||..|.||||..|||.||||| ||     || |||| |
BL00635___maf    295 CAGACCCATTCAGTGCTCACCGGCGTCTGCATT-AAGGACGGC-GAAAGA    342

BSNT_04071___    339 TCACAGCGAGACTTTTTATGATAAGACAGAAGT-TGTGTTTTGGTCCCTC    387
                     |    ||||.||.||||.|||..|.||.||||| |.| ||||||.|.|| 
BL00635___maf    343 T----GCGAAACATTTTTTGAGGAAACCGAAGTCTCT-TTTTGGCCTCT-    386

BSNT_04071___    388 AGTGAAGAA---GAGATTTGGACGTATATTGAAACAAAAGAGCCGATGGA    434
                       |||||||   ||.||..|..|.||.||.|..||...|||.|||.|.||
BL00635___maf    387 --TGAAGAAAAGGAAATCAGCGCTTACATCGCTACGGGAGAACCGTTTGA    434

BSNT_04071___    435 TAAAGCAGGTGCATACGGCATCCAAGGAAGAGGCGCGCTTTTTGTAAAGA    484
                     ||||||.|||.|||||||.||.|||||||.|||||||||||||||.||..
BL00635___maf    435 TAAAGCCGGTTCATACGGAATACAAGGAAAAGGCGCGCTTTTTGTCAAAC    484

BSNT_04071___    485 AAATAGACGGAGATTATTATTCAGTCATGGGCCTTCCTATATCAAAAACA    534
                     |.|||.|.|||||.||||||.||||..||||||||||.||.||.|||||.
BL00635___maf    485 AGATAAAAGGAGACTATTATACAGTTGTGGGCCTTCCGATTTCCAAAACG    534

BSNT_04071___    535 ATGAGAGTTCT------------TCGCCAC----TTTGATATAAGGGCAT    568
                     ||||||.|.||            ||.||||    |||||           
BL00635___maf    535 ATGAGAATGCTGAAAACGTTTGATCTCCACTCCTTTTGA-----------    573

BSNT_04071___    569 GA    570
                       
BL00635___maf    573 --    573


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