Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04087 and BL00628
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence dna-align/BSNT_04087___hemL.1.5803.seq
# -bsequence dna-align/BL00628___hemL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04087___hemL-BL00628___hemL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04087___hemL-BL00628___hemL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04087___hemL
# 2: BL00628___hemL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1320
# Identity: 1006/1320 (76.2%)
# Similarity: 1006/1320 (76.2%)
# Gaps: 51/1320 ( 3.9%)
# Score: 3762.5
#
#
#=======================================
BSNT_04087___ 1 ATGAGAAGCTATGAAAAATCAAAAACGGCTTTTAAAGAAGCGCAAAAACT 50
|||.|.||||||||.||.||.|||.||||.||..||||.||||||..|.|
BL00628___hem 1 ATGCGGAGCTATGAGAAGTCTAAAGCGGCATTCGAAGAGGCGCAACGAGT 50
BSNT_04087___ 51 CATGCCGGGCGGTGTGAACAGTCCCGTTC-GCGCATTTAAATCGGTAGAC 99
||||||||||||.|||||||| ||||.|| |.||.||||||||.||..||
BL00628___hem 51 CATGCCGGGCGGGGTGAACAG-CCCGGTCAGAGCCTTTAAATCAGTCAAC 99
BSNT_04087___ 100 ATGGACCCGATTTTTATGGAGCGCGGAAAAGGCTCGAAAATCTTTGATAT 149
|||||||||||||||||||||||.||||||||.||.|||||||.||||||
BL00628___hem 100 ATGGACCCGATTTTTATGGAGCGGGGAAAAGGATCAAAAATCTATGATAT 149
BSNT_04087___ 150 TGACGGGAATGAATATATTGACTACGTCTTGTCATGGGGGCCTTTAATTT 199
||||||.||.|||||.||.||.||.|||.||||||||||.||..|.||||
BL00628___hem 150 TGACGGAAACGAATACATCGATTATGTCCTGTCATGGGGACCGCTTATTT 199
BSNT_04087___ 200 TAGGGCATACAAATGACCGCGTCGTAGAAAGCCTCA-----AAAAAGTGG 244
|.||.||.|..|||||....||.|| ||||| | ||||.|.||
BL00628___hem 200 TGGGCCACAGCAATGAAAAAGTGGT-GAAAG----AGATTCAAAAGGCGG 244
BSNT_04087___ 245 CTGAATACGGGACAAGCTTTGGTGCTCCGACTGAAGTAGAAAATGAACTG 294
|.|||.|||||||||||||.|||||.|||||.|||.|.||||..||.||.
BL00628___hem 245 CAGAACACGGGACAAGCTTCGGTGCGCCGACAGAACTGGAAACCGAGCTT 294
BSNT_04087___ 295 GCTAAGCTCGTCATTGATCGTGTGCCATCTGTAGAAATTGTACGAATGGT 344
||..||||.|||||.||.||.||.||.||..|||||||.||.||.|||||
BL00628___hem 295 GCCGAGCTTGTCATCGACCGCGTTCCTTCCATAGAAATCGTCCGGATGGT 344
BSNT_04087___ 345 AAGCTCCGGAACAGAGGCTACAATGAGTGCCCTCCGTTTGGCAAGGGGCT 394
.||||||||.||.|||||.||.|||||.|||.|.||..||||..|.||.|
BL00628___hem 345 GAGCTCCGGTACGGAGGCGACGATGAGCGCCTTGCGGCTGGCGCGCGGAT 394
BSNT_04087___ 395 ATACGGGCCGCAACAAGATTTTAAAATTTGAGGGCTGCTACCACGGACAC 444
|.||.|||||.|||||.||..||||||||||.|||||||||||.||||||
BL00628___hem 395 ACACAGGCCGTAACAAAATCGTAAAATTTGAAGGCTGCTACCATGGACAC 444
BSNT_04087___ 445 GGCGATTCTCTCTTGATTAAAGCTGGTTCAGGTGTTGCCACTCTCGGTCT 494
||.|||||.||..||||||||||.||.||.||.||.||.||.|||||.||
BL00628___hem 445 GGTGATTCCCTGCTGATTAAAGCGGGCTCGGGAGTAGCGACACTCGGCCT 494
BSNT_04087___ 495 GCCTGACAGCCCGGGGGTGCCTGAAGGCATTGCGAAAAACACCATCACCG 544
.|||||||||||.||.||.||.|||.|||||||.||||||||.||.||||
BL00628___hem 495 CCCTGACAGCCCCGGAGTTCCGGAAAGCATTGCAAAAAACACGATTACCG 544
BSNT_04087___ 545 TTCCGTACAATGATTTAGAAAGTGTAAAGCTTG-CTTTCCAGCAATTCGG 593
||||.|||||||||.|.|||||..|.||.|||| |||||.|| |||||||
BL00628___hem 545 TTCCTTACAATGATCTGGAAAGCATGAAACTTGTCTTTCAAG-AATTCGG 593
BSNT_04087___ 594 TGAAGACATTGCGGGAGTCATTGTAGAGCCAGTTGCCGGAAATATGGGTG 643
.||.||||||||.||.|||||.||.||.||.||.||.||.||||||||.|
BL00628___hem 594 AGATGACATTGCAGGCGTCATCGTTGAACCTGTCGCTGGCAATATGGGCG 643
BSNT_04087___ 644 TTGTTCCGCCGCAAGAAGGCTTCCT-GCAGGGTCTGCGTGATATCACTGA 692
|.||.||||||....||||.||||| |.|||| ||.||.||..|.|||||
BL00628___hem 644 TCGTACCGCCGGTTAAAGGGTTCCTCGAAGGG-CTTCGCGAGCTGACTGA 692
BSNT_04087___ 693 GCAGTACGGCTCCCTGCTGATTTTTGATGAGGTGATGACAGGCTTCCGGG 742
|..|.|.|||.||||||||||.||||||||.|||||||||||.|||.|||
BL00628___hem 693 GACGCATGGCGCCCTGCTGATATTTGATGAAGTGATGACAGGATTCAGGG 742
BSNT_04087___ 743 TCGATTATAACTGCGCTCAAGGTTACTTCGGCGTAACGCCTGATCTGACT 792
|.|||||.|||||.||.|||||.||.|||||.||.|||||||||.||||.
BL00628___hem 743 TGGATTACAACTGTGCCCAAGGCTATTTCGGGGTGACGCCTGATTTGACA 792
BSNT_04087___ 793 TGTTTAGGAAAAGTAATCGGGGGCGGACTTCCTGTCGGCGCTTATGGCGG 842
||..|.||||||||.|||||.|||||.||||||||||||||||||||.||
BL00628___hem 793 TGCCTCGGAAAAGTGATCGGCGGCGGTCTTCCTGTCGGCGCTTATGGAGG 842
BSNT_04087___ 843 AAAGGCAGAAATCATGGAGCAGATCGCTCCAAGCGGTCCGATCTATCAAG 892
||||||.||||||||||||.|||||||.||.|||||||||||||||||.|
BL00628___hem 843 AAAGGCGGAAATCATGGAGAAGATCGCGCCGAGCGGTCCGATCTATCAGG 892
BSNT_04087___ 893 CTGGTACATTGTCAGGCAACCCGCTTGCGATGACGGCTGG-CTTAGAGAC 941
|.||.||..||||.||||||||||||||.|||||.||.|| ||| ||.||
BL00628___hem 893 CCGGGACGCTGTCCGGCAACCCGCTTGCCATGACAGCCGGACTT-GAAAC 941
BSNT_04087___ 942 ATTGAAACAGCTGACACCTGAATCCTACAAGAATTTCATCAAAAAAGGCG 991
.||||||||||||||.||||||||||||..|.|.|||..|...||||..|
BL00628___hem 942 GTTGAAACAGCTGACCCCTGAATCCTACCGGGAATTCTCCCGCAAAGCTG 991
BSNT_04087___ 992 ACAGGCTGGAAGAAGGAATTTCAAAAGCCGCCGAGGCTCATGGTATTCCG 1041
||.|..|||||.||||||||||..||||.||.|||....||||.||||||
BL00628___hem 992 ACCGCTTGGAAAAAGGAATTTCTGAAGCTGCAGAGAAAAATGGCATTCCG 1041
BSNT_04087___ 1042 CATACCTTTAACCGTGCAGGTTCGATGATCGGTTTCTTCTTTACTAACGA 1091
..|||.||.|||.|.||.||.||.||||||||.||.|||||.||.||.|.
BL00628___hem 1042 TGTACATTCAACAGGGCGGGGTCTATGATCGGCTTTTTCTTCACAAATGG 1091
BSNT_04087___ 1092 ACCAGTCATTAATTATGGAACAGCGAAATCA-TCTGA--TTTGAAGCTGT 1138
|||.|||||.|||||||..||||||||| || ||||| |..|| ||||
BL00628___hem 1092 ACCGGTCATCAATTATGATACAGCGAAA-CAGTCTGACCTCGGA--CTGT 1138
BSNT_04087___ 1139 TCGC--AAGCTATTATAAAGGGATGGCAAATGAAGGGGTATTCCTTCCGC 1186
|.|| || |||||||||||.|||||..|||||||.||.||.||.||||
BL00628___hem 1139 TTGCCGAA--TATTATAAAGGAATGGCCGATGAAGGCGTGTTTCTGCCGC 1186
BSNT_04087___ 1187 CATCACAATTCGAAGGTCTTTTCCTCTCAACGGCCCATACTGATGAAGAT 1236
|.|||||.||.|||||.||.|||.|.|||||.||.|||||.|||||.||.
BL00628___hem 1187 CTTCACAGTTTGAAGGGCTGTTCTTGTCAACCGCTCATACGGATGACGAC 1236
BSNT_04087___ 1237 ATTGAAAACACAATCCAGGCAGCTGA----------GAAAGTATTTGCTG 1276
|||||..|.||.||..|.||.||||| |||||
BL00628___hem 1237 ATTGAGCATACGATTAAAGCTGCTGAACGCGTATTCGAAAG--------- 1277
BSNT_04087___ 1277 AGATCAGCCG---CAGATAA 1293
.|||||||| |||||||
BL00628___hem 1278 -AATCAGCCGCTCCAGATAA 1296
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