Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04094 and BL00623
See
Amino acid alignment /
Visit
BSNT_04094 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:09
# Commandline: needle
# -asequence dna-align/BSNT_04094___hemA.1.5803.seq
# -bsequence dna-align/BL00623___hemA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04094___hemA-BL00623___hemA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04094___hemA-BL00623___hemA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04094___hemA
# 2: BL00623___hemA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1406
# Identity: 1035/1406 (73.6%)
# Similarity: 1035/1406 (73.6%)
# Gaps: 82/1406 ( 5.8%)
# Score: 3721.5
#
#
#=======================================
BSNT_04094___ 1 ATGCATATACTTGTTGTGGGAGTAGATTATAAATCCGCCCCTATTGAGAT 50
||||||||||||||.||||||.|.|||||.|||||.||||||.||||.||
BL00623___hem 1 ATGCATATACTTGTCGTGGGATTGGATTACAAATCAGCCCCTGTTGATAT 50
BSNT_04094___ 51 ACGTGAAAAAGTAAGTTTTCAGCCGAATGAGCTGGCGGAAGCAATGGTGC 100
|||||||||..|||..|||||||||.|||||||||.|.|.||.||||.||
BL00623___hem 51 ACGTGAAAAGTTAACCTTTCAGCCGGATGAGCTGGGGCAGGCGATGGCGC 100
BSNT_04094___ 101 AGCTGAAAGAAGAGAAAAGCATTCTTGAAAACATCATTGTCTCAACCTGC 150
|..||||||||||.||||||||.|||||.||||||||.||.||.||.|||
BL00623___hem 101 AATTGAAAGAAGAAAAAAGCATACTTGAGAACATCATCGTGTCGACATGC 150
BSNT_04094___ 151 AACCGCACTGAAATTTATGCGGTAGTCGACCAGCTCCATACCGGCCGTTA 200
|||||.||.||..|.|||||.||.||.||.|||||.||.|||||.|||||
BL00623___hem 151 AACCGGACAGAGCTGTATGCAGTCGTTGATCAGCTGCACACCGGACGTTA 200
BSNT_04094___ 201 TTATATAAAAAAGTTTTTAGCTGATTGGTTTCAATTAAGCAAAGAAGAGC 250
||||||.||||.||||||.||..|.|||||...||||||||||||.||..
BL00623___hem 201 TTATATGAAAATGTTTTTGGCGAACTGGTTCGGATTAAGCAAAGAGGACA 250
BSNT_04094___ 251 TGTCACCGTTCTTAACGTTTTATGAGAGCGATGCCGCTGTTGAGCATTTA 300
|.||.||.|.|||.|.|||||||||.|.|||.|..||.|||||.||..|.
BL00623___hem 251 TTTCGCCTTACTTGAAGTTTTATGAAAACGACGGGGCCGTTGAACACCTG 300
BSNT_04094___ 301 TTCCGTGTAGCCTGCGGACTTGACTCTATGGTGATTGGCGAAACGCAGAT 350
|||||.|||.|.||||||.|.||.||.|||||.|||||.|||||||||||
BL00623___hem 301 TTCCGCGTATCGTGCGGATTGGATTCGATGGTTATTGGAGAAACGCAGAT 350
BSNT_04094___ 351 TCTCGGACAGGTACGCG-AC-AGCTTTAAAACAGCTCAGCAAGAAAAAAC 398
|.|.||.||.|| ||| || ||.|||||....||||||.||||.||.||
BL00623___hem 351 TTTGGGCCAAGT--GCGTACAAGTTTTAAGCTGGCTCAGGAAGAGAAGAC 398
BSNT_04094___ 399 GATCGGGACTATTTTTAATGAGCTGTTTAAGCAGGCGGTTACAGTGGGCA 448
.||.||.||..||||.||..|..||||||||||||||||.||.|| .|||
BL00623___hem 399 AATTGGTACCGTTTTCAACTATTTGTTTAAGCAGGCGGTCACGGT-CGCA 447
BSNT_04094___ 449 AA-CGGACT--CACGCAGAAACAGACATTGGCTCAAATGCGGTGTCAGTA 495
|| || || ||.||.|||||.|||||||..||||||||.||.||.||.
BL00623___hem 448 AAGCG--CTGCCATGCCGAAACGGACATTGCTTCAAATGCTGTATCCGTC 495
BSNT_04094___ 496 AGCTATGCTGCAGTTGAACTTGCCAAAAAAATCTTCGGAAATCTTTCAAG 545
||||||||.||.||.||.|||||||..|||||||||||..|.|||||...
BL00623___hem 496 AGCTATGCCGCCGTCGAGCTTGCCAGGAAAATCTTCGGCGACCTTTCCGA 545
BSNT_04094___ 546 CAAGCACATATTGATTCTCGGTGCGGGAAAAATGGGCGAGCTTGCTGCGG 595
.||.|||.|..||||||||||.|||||.||||||||.||||||||.|...
BL00623___hem 546 TAAACACGTGCTGATTCTCGGGGCGGGCAAAATGGGTGAGCTTGCGGTTC 595
BSNT_04094___ 596 AAAACCTGCACGGACAGGGAATCGGCAAGGTCACTGTCATTAACCGAACG 645
|||||||||||||.||.||||||||..||||.||.||.||.|||.||||.
BL00623___hem 596 AAAACCTGCACGGCCACGGAATCGGACAGGTTACGGTGATCAACAGAACA 645
BSNT_04094___ 646 TACTTGAAAGCGAAGGAGCTTGCAGACCGTTTCTCAGGTGAAGCGAGAAG 695
|..|..|||||||||||||||||.|.||||||.|||||.|..||||.|||
BL00623___hem 646 TTTTCAAAAGCGAAGGAGCTTGCCGGCCGTTTTTCAGGCGCGGCGAAAAG 695
BSNT_04094___ 696 CTTGAATCAGCTTGAAAGCGCGCTTG-CGGAGGCTGATATTTTAATCAGT 744
|||||||.||||..||.|||| .||| .|||.||.||||||.|.||||||
BL00623___hem 696 CTTGAATGAGCTGCAATGCGC-TTTGATGGAAGCCGATATTCTCATCAGT 744
BSNT_04094___ 745 TCAACCGGTGCAAGTGAATTTGTCGTGTCCAAAGAGATGATGGAAAACGC 794
||.|||||.||.||.|..|.||||||..|.|||||||||||.|||.|.|.
BL00623___hem 745 TCGACCGGCGCCAGCGGCTATGTCGTCACAAAAGAGATGATCGAACATGT 794
BSNT_04094___ 795 GAATAAGCTTCGCAAGGGACGTCCGCTGTTTATGGTCGACATTGCCGTGC 844
.||||||||||||||.||..|||||||.||||||||.|||||||||||||
BL00623___hem 795 CAATAAGCTTCGCAAAGGCTGTCCGCTTTTTATGGTGGACATTGCCGTGC 844
BSNT_04094___ 845 CTAGAGATCTTGATCCGGCGCTGAATGATCTTGAAGGTGTTTTTCTTTAT 894
|..|.||||||||.|||||.||.|..||..|.|||||.||.||.||.||.
BL00623___hem 845 CGCGGGATCTTGACCCGGCTCTCAGCGAAGTGGAAGGCGTCTTCCTGTAC 894
BSNT_04094___ 895 GATATCGACGATCTGGAAGGCATTGTAGAAGCGAACATGAAAGAGCGGAG 944
|||||.||||||||.|||||.||.||.||||..||..||||.||.||
BL00623___hem 895 GATATTGACGATCTTGAAGGGATCGTCGAAGAAAATTTGAAGGAACG--- 941
BSNT_04094___ 945 AGAAACA-------GCTGAAAAAGTTGAACTGTTAATTGAAGAAACC--- 984
.|| ||.|||.|.||.||.|||.|.||||||| |
BL00623___hem 942 ----CCAGGCCGTTGCCGAAGAGGTGGAGCTGATTATTGAAG----CTGA 983
BSNT_04094___ 985 -ATTGTGGAATTTAAACAATGGATGAATACACTTGGTGTTGTGCCGGTTA 1033
||.||....||||||||||||.|||||||.||.||.||.||||||||.|
BL00623___hem 984 GATCGTTTCTTTTAAACAATGGCTGAATACGCTCGGCGTCGTGCCGGTCA 1033
BSNT_04094___ 1034 TTTCTGCATTGCGCGAAAAGGCGCTTG-CCATCCAGTCAGAAACGATGGA 1082
|.||.||..|..|.|||||.|| |||| |.||||||.|.|||||||||.|
BL00623___hem 1034 TCTCGGCTCTCAGGGAAAAAGC-CTTGACGATCCAGGCGGAAACGATGCA 1082
BSNT_04094___ 1083 CAGCATTGAGCGTAAGCTGCCTCACTTAAGCACAAGAGAGAAAAAACTGT 1132
.|||||.||.||.|||||.|||||.||.||||||||.|||||||||||.|
BL00623___hem 1083 GAGCATCGAACGGAAGCTCCCTCATTTGAGCACAAGGGAGAAAAAACTTT 1132
BSNT_04094___ 1133 TGAACAAACACACCAAAAGTATTATTAACCAAATGCTT---CGTGATCCG 1179
|.|||||.||.||.|||||.|||||.||||| |||| ||.||.|||
BL00623___hem 1133 TAAACAAGCATACGAAAAGCATTATCAACCA---GCTTTTGCGCGACCCG 1179
BSNT_04094___ 1180 ATTTTAAAGGTGAAAGAGCTTGCGGCAGATGCTGATTCTGAAGAAAAGCT 1229
||||||||.|||||.|||.|||||.||||.||||||.|.|||||||||||
BL00623___hem 1180 ATTTTAAAAGTGAAGGAGTTTGCGTCAGAAGCTGATGCCGAAGAAAAGCT 1229
BSNT_04094___ 1230 CGCGTTGTTTATGCAGATTTTTGATATTGAAGAAGC------TGCGGGCC 1273
.||..||||.|.|||||||||||||||||||||||| |.|.|.|.
BL00623___hem 1230 TGCACTGTTCACGCAGATTTTTGATATTGAAGAAGCGGCTTTTCCTGACG 1279
BSNT_04094___ 1274 GT------CAAATGATGAAAACCGTTGAAAGCAGCCAGAAGGTCCACTCT 1317
|| ||| ||.||| ||| ||||| |||.||..|.
BL00623___hem 1280 GTGAGAGACAA--GACGAA---CGT------CAGCC----GGTTCATGCG 1314
BSNT_04094___ 1318 TTTAAGAAGGCTGAATCAAAAGCGGGCTTTAGCCCACTTGTA-----AGT 1362
|||||| .|||..|||| .||.||.||| .||||.|| ||.
BL00623___hem 1315 TTTAAG-CGGCAAAATC---CGCAGGGTTT----GACTTCTATCGCGAGC 1356
BSNT_04094___ 1363 GAGTGA 1368
||||||
BL00623___hem 1357 GAGTGA 1362
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.