Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04107 and BL00613
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence dna-align/BSNT_04107___leuC.1.5803.seq
# -bsequence dna-align/BL00613___leuC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04107___leuC-BL00613___leuC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04107___leuC-BL00613___leuC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04107___leuC
# 2: BL00613___leuC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1430
# Identity: 1122/1430 (78.5%)
# Similarity: 1122/1430 (78.5%)
# Gaps: 22/1430 ( 1.5%)
# Score: 4350.5
#
#
#=======================================
BSNT_04107___ 1 ATGATGCCTCGAACAATCATCGAAAAGATTTGGGATCAGCATATTGTAAA 50
||||||||||||||.|||||||||||.|||||||||||.||..|..|.||
BL00613___leu 1 ATGATGCCTCGAACGATCATCGAAAAAATTTGGGATCAACACGTGATTAA 50
BSNT_04107___ 51 ACATGGTGAGGGAAAGCCGGATCTTCTCTATATTGATTTGCACCTCATTC 100
|.|.|||||.||.|||||.||.|||||||||||.|||.||||.||.||.|
BL00613___leu 51 AAAAGGTGAAGGGAAGCCTGACCTTCTCTATATCGATCTGCATCTGATAC 100
BSNT_04107___ 101 ATGAGGTGACGTCTCCTCAGGCATTTGAAGGCTTGAGACAAAAGGGAAGA 150
|||||||.|||||.||||||||.|||||||||.||||.||||||...|||
BL00613___leu 101 ATGAGGTAACGTCGCCTCAGGCCTTTGAAGGCCTGAGGCAAAAGAACAGA 150
BSNT_04107___ 151 AAGGTCAGAAGACCCCAAAACACATTTGCGACAATGGACCACAACATCCC 200
||.||||||.|.||.|||||.||.|||||.||.||||||||||||||.||
BL00613___leu 151 AAAGTCAGACGGCCTCAAAATACGTTTGCCACGATGGACCACAACATTCC 200
BSNT_04107___ 201 GACTGTCAATCGTTTTGAGATAAAGGATGAAGTTGCGAAACGCCAGGTAA 250
||||||||||||.||||||||.||.|||||.||.||.|||||.|||||.|
BL00613___leu 201 GACTGTCAATCGGTTTGAGATTAAAGATGATGTCGCTAAACGGCAGGTCA 250
BSNT_04107___ 251 CGGCGCTTGAAAGAAACTGTGAGGAATTTGGCGTGCGCCTTGCCGATCT- 299
..|||||.|||.|.||.||.||.|||||.|||.|.||||||||.|| ||
BL00613___leu 251 GTGCGCTCGAACGGAATTGCGAAGAATTCGGCATCCGCCTTGCAGA-CTT 299
BSNT_04107___ 300 -TCACAGTGTGGATCAAGGGATTGTCCATGTCGTCGGACCTGAACTGGGC 348
||| ||.||.||.||.|||||.|||||||||.||||.|||||||||||.
BL00613___leu 300 GTCA-AGCGTAGACCAGGGGATCGTCCATGTCATCGGGCCTGAACTGGGA 348
BSNT_04107___ 349 TTAACGCTTCCAGGGAAAACGATTGTGTGCGGGGACAGTCATACATCAAC 398
||.|||||.||.||.||||||||.||.|||||.|||||.||||||||.||
BL00613___leu 349 TTGACGCTCCCGGGCAAAACGATCGTTTGCGGAGACAGCCATACATCCAC 398
BSNT_04107___ 399 ACATGGTGCTTTCGGCGCTCTTGCATTTGGGATCGGGACGAGTGAAGTTG 448
|||.||.||.||.|||||.||.||.||.||.|||||.|||||.|||||.|
BL00613___leu 399 ACACGGAGCGTTTGGCGCGCTCGCTTTCGGAATCGGAACGAGCGAAGTCG 448
BSNT_04107___ 449 AACATGTCCTTTCCACACAGACACTTTGGCAGCAGCGTCCAAAAACACTT 498
||||.|||.|.||.||.|||||.|||||||||||....||.||.||.||.
BL00613___leu 449 AACACGTCTTGTCAACGCAGACGCTTTGGCAGCAAAAACCGAAGACGCTG 498
BSNT_04107___ 499 GAAGTGCGCGTAGATGGAACGCTTCAAAAAGGGGTAACGGCAAAGGATGT 548
|||.|.|||||.||.||.|..||.||||||||.||.|||||.||.||.||
BL00613___leu 499 GAAATCCGCGTTGACGGCAAACTGCAAAAAGGAGTGACGGCTAAAGACGT 548
BSNT_04107___ 549 CATCCTTGCTGTCATCGGCAAATACGGTGTGAAATTCGGCACAGGCTACG 598
|||.||.||..|||||||.||||||||.||.||||||||..|.|||||.|
BL00613___leu 549 CATTCTGGCGATCATCGGAAAATACGGGGTTAAATTCGGTGCGGGCTATG 598
BSNT_04107___ 599 TCATTGAATACACTGGGGAAGTATTCAGAAATATGACGATGGATGAACGA 648
||||||||||.||.||.|||||.|||.||||.|||.|||||||.|||||.
BL00613___leu 599 TCATTGAATATACCGGCGAAGTGTTCCGAAACATGTCGATGGACGAACGG 648
BSNT_04107___ 649 ATGACTGTTTGTAACATGTCAATTGAAGCAGGAGCAAGAGCAGGTTTGAT 698
|||||.|||||.|||||||||||.|||||.||.||||||||.||.|||||
BL00613___leu 649 ATGACGGTTTGCAACATGTCAATCGAAGCTGGGGCAAGAGCTGGATTGAT 698
BSNT_04107___ 699 TGCACCTGACGAGGTGACGTTTGAATATTGCAAAAATCGC----AAGTAC 744
||||||.||.|||..|||||||||||||..||||| | ||.||.
BL00613___leu 699 TGCACCGGATGAGACGACGTTTGAATATGTCAAAA----CAAAAAAATAT 744
BSNT_04107___ 745 ACGCCAAAAGGCGAAGAATTTGACAAGGCCGTAGAGGAATGGAAGGCGCT 794
.|||||||||||||.||.|||||.||.||.|||||.|||||||||...||
BL00613___leu 745 GCGCCAAAAGGCGAGGATTTTGAGAAAGCTGTAGAAGAATGGAAGAACCT 794
BSNT_04107___ 795 GCGCACAGACCCGGGCGCTGTTTACGATAAATCTATCGTCCTTGACGGCA 844
|...||.||.|||||.||.||.|||||.....|.|||||..|.|||||.|
BL00613___leu 795 GAAAACCGATCCGGGGGCGGTCTACGACCGGACGATCGTGATGGACGGAA 844
BSNT_04107___ 845 ACAAAATTTCCCCTATGGTGACATGGGGCATTAACCCTGGAATGGTTCTT 894
.|...|||||.||.||||||||.||||||||.||||||||.|||||.||.
BL00613___leu 845 GCGCCATTTCTCCGATGGTGACGTGGGGCATCAACCCTGGCATGGTGCTG 894
BSNT_04107___ 895 CCTGTCGATTCTGAA---GTTCCTGCGCCGGAAAGCTTTTCTGCA-GAAG 940
||.||.|| |||| .||||.|.|||.| |.|||||..|||| ||||
BL00613___leu 895 CCGGTTGA---TGAAACGATTCCGGGGCCTG-AGGCTTTCTTGCAGGAAG 940
BSNT_04107___ 941 ATGATAAAAAAGAAGCGATTCGCGCTTATGAATATATGGGAC-TGACTCC 989
|.|||||||||||||||...|||||.||||||||||||||.| ||| .||
BL00613___leu 941 ACGATAAAAAAGAAGCGCAGCGCGCATATGAATATATGGGTCTTGA-ACC 989
BSNT_04107___ 990 TCATCAGAAAATTGAAGACATTAAAGTGGAGCACGTATTTATCGGTTCCT 1039
..||.|.|||||.||.|||||||.|.|.|||||.||.|||||||||||.|
BL00613___leu 990 ATATAAAAAAATCGAGGACATTACAATTGAGCATGTCTTTATCGGTTCAT 1039
BSNT_04107___ 1040 GCACAAATTCCCGCATGACTGACCTTCGACAGGCTGCTGACATGATCAAA 1089
||||.||.||.||.|||||.||.|||||.|||||.||.||.|||||.|||
BL00613___leu 1040 GCACCAACTCGCGTATGACAGATCTTCGCCAGGCGGCCGAAATGATTAAA 1089
BSNT_04107___ 1090 GGGAAGAAGGTAGCTGACAGCGTAAGGGCCATCGTCGTGCCCGGATCCCA 1139
||..|.||.||.||.|||.||||.||.||.||||||||.|||||.||.||
BL00613___leu 1090 GGTCAAAAAGTCGCCGACGGCGTCAGAGCGATCGTCGTACCCGGCTCGCA 1139
BSNT_04107___ 1140 AAGCGTGAAGCTTCAGGCTGAAAAAGAAGGGCTTGACCAGATTTTCTTGG 1189
||||||.||..|.||.||.|||||||||||||||.||.||||||||.|.|
BL00613___leu 1140 AAGCGTCAAAATCCAAGCGGAAAAAGAAGGGCTTCACAAGATTTTCATCG 1189
BSNT_04107___ 1190 AAGCTGGATTTGAATGGAGAGAGTCAGGCTGCAGCATGTGTTTGAGTATG 1239
||||.||.||||||||||||||.||.||.|||||||||||||||||.|||
BL00613___leu 1190 AAGCGGGCTTTGAATGGAGAGAATCGGGATGCAGCATGTGTTTGAGCATG 1239
BSNT_04107___ 1240 AATAATGATGTTGTTCCTGAGGGAGAGCGCTGTGCATCAACCTCTAACCG 1289
||.|||||||||||.|||||.|||||||||||.||.||.||.||.|||||
BL00613___leu 1240 AACAATGATGTTGTCCCTGAAGGAGAGCGCTGCGCTTCGACTTCCAACCG 1289
BSNT_04107___ 1290 CAACTTCGAGGGCAGACAAGGAAAAGGTGCAAGAACACATCTCGTCAGCC 1339
|||.||.||.|||||.||.||.|||||.||.|||||.|||||||||||||
BL00613___leu 1290 CAATTTTGAAGGCAGGCAGGGCAAAGGAGCCAGAACGCATCTCGTCAGCC 1339
BSNT_04107___ 1340 CGGCGATGGCTGCGATGGCTGCCATTCACGGACACTTCGTTGATGTCAGA 1389
|||||||||||||||||||.||.||||||||.|.|||.||.|||||||||
BL00613___leu 1340 CGGCGATGGCTGCGATGGCCGCGATTCACGGCCGCTTTGTCGATGTCAGA 1389
BSNT_04107___ 1390 AAGTTTTATCAGGAAAAAACAGTTGTGTAA 1419
||.|.|||.||.||.|.|||||.|||.||.
BL00613___leu 1390 AAATATTACCAAGAGACAACAGCTGTATAG 1419
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