Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01145 and BL00605
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence dna-align/BSNT_01145___opuE.1.5803.seq
# -bsequence dna-align/BL00605___opuE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01145___opuE-BL00605___opuE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01145___opuE-BL00605___opuE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01145___opuE
# 2: BL00605___opuE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1535
# Identity: 1065/1535 (69.4%)
# Similarity: 1065/1535 (69.4%)
# Gaps: 109/1535 ( 7.1%)
# Score: 3475.0
#
#
#=======================================
BSNT_01145___ 1 GTGAGTATTGAAATTATTATATCTTTAGGAATTTACTTTATTGCCATGCT 50
||||||.|||||.|..||||.||.||.||.|||||.|||...||.|||||
BL00605___opu 1 GTGAGTGTTGAAGTATTTATTTCGTTGGGGATTTATTTTGCCGCGATGCT 50
BSNT_01145___ 51 GTTAATCGGCTGGTATGC--ATTCAAGAAAACCACTGACATC-------A 91
.||||||||||||||..| || ||||| |||||| |
BL00605___opu 51 CTTAATCGGCTGGTACTCCTAT---AGAAA------GACATCCAATTTGA 91
BSNT_01145___ 92 ATGATTACATGCTTGGAGGAAGAGGCCTCGGACCATTC-GTTACTGCTTT 140
||||.|||||||||||.||.|||||.||.||.|| |.| |||||.|||||
BL00605___opu 92 ATGACTACATGCTTGGCGGCAGAGGTCTTGGGCC-TGCTGTTACGGCTTT 140
BSNT_01145___ 141 GTCTGCCGGTGCGGCCGATATGAGCGGATGGATGCTGATGGGTGTTCCCG 190
.||.|||||.|||.|.||.||||||||.||||||||||||||..|.||||
BL00605___opu 141 ATCGGCCGGCGCGTCTGACATGAGCGGCTGGATGCTGATGGGACTGCCCG 190
BSNT_01145___ 191 GCGCGATGTTTGCGACAGGGCTGTCCACCTTATGGCTTGCTTTAGGTCTT 240
|.||.||||.||.||||||.||.||.|.|...||||||||..|.|||.|.
BL00605___opu 191 GAGCCATGTATGTGACAGGACTTTCAAGCGCCTGGCTTGCCGTCGGTTTA 240
BSNT_01145___ 241 ACAATCGGGGCGTACTCAAATTACTTGCTGCTGGCTCCAAGGCTGCGTGC 290
||||||||.||.||....||.||.|||.||.|.|||||..|||||||..|
BL00605___opu 241 ACAATCGGAGCTTATGTGAACTATTTGGTGGTCGCTCCCCGGCTGCGCAC 290
BSNT_01145___ 291 TTATACAGAAGCGGCGGATGATGCGATTACAATTCCTGATTTCTTTGATA 340
.||||||||||..||..|.|||||||||||||||||.||.||.||.||.|
BL00605___opu 291 ATATACAGAAGTAGCAAACGATGCGATTACAATTCCGGACTTTTTCGAAA 340
BSNT_01145___ 341 AACGATTCCAGCATTCTTCATCACTGCTGAAAATC---------GTATCT 381
|.||.||..|..||.|..|| |.|||| |.|||.
BL00605___opu 341 ATCGGTTTAATGATACAACA---------AGAATCTTGCGCCTGGCATCA 381
BSNT_01145___ 382 G-CATTGATCATCATGATCTTTTTCACATTATATACCTCTTCCGGTATGG 430
| |||.| ||||||||.|.|||||||||||.||.||.||..|.|||||||
BL00605___opu 382 GCCATCG-TCATCATGGTGTTTTTCACATTGTACACGTCGGCGGGTATGG 430
BSNT_01145___ 431 TATCTGGCGGACGGCTGTTTGAATCTGCTTTTGGTGCGGATTACAAATTA 480
|.||.||.|||.|.|||||||||.|.||.|||||....|||||.|||.|.
BL00605___opu 431 TGTCCGGAGGAAGACTGTTTGAAACGGCGTTTGGCCTCGATTATAAAATC 480
BSNT_01145___ 481 GGCCTGTTTC-TGACCACCGCAGTTGTCGTGTTATACACACTGTTTGGCG 529
||.|| |||| |.||..|||||||.||..|....||.||.|||||.||.|
BL00605___opu 481 GGTCT-TTTCTTAACGGCCGCAGTCGTAATTGCCTATACGCTGTTCGGAG 529
BSNT_01145___ 530 GTTTCCTTGCTGTCAGTCTGACTGACTTCGTGCAGGGTGCGATCATGTTT 579
|.||..|.||.|||||||||||.|||||||||||.|||..|||.||||||
BL00605___opu 530 GATTTTTGGCCGTCAGTCTGACAGACTTCGTGCAAGGTTTGATTATGTTT 579
BSNT_01145___ 580 GCAGCACTAGTGCTTGTGCCGATCGTTGCTTTTACCCATGTGGGCGGCGT 629
...||..|||||||.||||||||||||||.|||||.||..|.|||||..|
BL00605___opu 580 ATCGCTTTAGTGCTCGTGCCGATCGTTGCCTTTACTCAATTAGGCGGAAT 629
BSNT_01145___ 630 TGCTCCGACTTTCCATGAAATCGACGCTGTTAATCCACATTTATTGGATA 679
|.|.|||||||||.|||..|||||.|...|.||||||...||..|.|||.
BL00605___opu 630 TACGCCGACTTTCAATGTGATCGAAGAAATCAATCCAAGCTTGCTCGATT 679
BSNT_01145___ 680 TTTTTAAAGGCGCGAGCGTCATTAGCATTATTTCCTATTTAGCCTGGGGG 729
|.||.|||||..|||.||||||||||||||||||.|.|.|.||||||||.
BL00605___opu 680 TCTTCAAAGGAACGACCGTCATTAGCATTATTTCATTTCTCGCCTGGGGA 729
BSNT_01145___ 730 TTGGGCTACTACGGCCAGCCTCATATCATCGTCCGATTTATGGCCATTAA 779
.|||||||.|.|||.|||||.|||||.||||||||.||||||||.|||..
BL00605___opu 730 CTGGGCTATTTCGGTCAGCCGCATATTATCGTCCGCTTTATGGCGATTTC 779
BSNT_01145___ 780 AGACATTAAAGATTTAAAACCTGCACGCCGAATCGGTATGAGCTGGATGA 829
|..|.|.|||||..|.||.|||||.|||||.||||..|||.|||||||||
BL00605___opu 780 ATCCGTAAAAGAACTGAAGCCTGCGCGCCGCATCGCGATGGGCTGGATGA 829
BSNT_01145___ 830 TCATTACAGTTCTAGGTTCCGTGCTGACG--GGTTTAATCGGTGTTGCAT 877
||||..|.||..|.||..|..|||| || ||..|.|.||||||.||.|
BL00605___opu 830 TCATCTCCGTAATCGGCGCTCTGCT--CGTCGGACTGACCGGTGTGGCGT 877
BSNT_01145___ 878 ACGCCCAT-AAATTCGGAGT--TGCTGTAAAAGATCCGGAGATGATTTTC 924
|.|.|||| |.| ||| || .||..|.|||||||||||.|.||||||.
BL00605___opu 878 ATGTCCATGAGA--CGG-GTACAGCGCTTAAAGATCCGGAAACGATTTTT 924
BSNT_01145___ 925 ATTATCTTCTCTAAAATTTTGTTCCACCCATTAATTACAGGGTTCTTATT 974
||..|.||.||.||..|.||.|||||.||..|.||.||.||.||.||..|
BL00605___opu 925 ATCGTGTTTTCAAAGGTATTATTCCATCCGCTCATCACCGGATTTTTGCT 974
BSNT_01145___ 975 GTCAGCTATTTTGGCTGCCATCATGAGTTCGATTTCCTCACAGCT-CTTA 1023
.||.|||.|..|.||.||.||.||||||.||.|.||.||.||||| |||
BL00605___opu 975 TTCCGCTTTGCTCGCGGCGATTATGAGTACGGTGTCTTCCCAGCTGCTT- 1023
BSNT_01145___ 1024 GTCACAGCAAGTGCTGTAACAGAGGATTTATACCGGTCATTTTTCAGACG 1073
||.|||.||||.||..|.||.||.|||||.||||||.|.||||||.|.||
BL00605___opu 1024 GTTACATCAAGCGCCATGACGGAAGATTTTTACCGGACGTTTTTCCGGCG 1073
BSNT_01145___ 1074 AAAAGCTTCTGATAAAGAA-TTGGTCATGATCGGGCGATTGTCCGT---- 1118
.||||||||.|||||.||| |.|.||.|| ||||.||..||..|||
BL00605___opu 1074 CAAAGCTTCGGATAAGGAACTCGTTCTTG-TCGGACGTCTGAGCGTTCTG 1122
BSNT_01145___ 1119 CTTAGTCATTGCCGTTATCGCGGTACTCTTGTCATTGAATCCGAACAGCA 1168
||| ||| |||||.||||||.|.||..||||..|||..|||||.|.||
BL00605___opu 1123 CTT-GTC---GCCGTCATCGCGATCCTTCTGTCTCTGACACCGAATAACA 1168
BSNT_01145___ 1169 CCATTCTTGATTTGGTCGGATACGCTTGGGCCGGCTTCGGTTCAGCTTTC 1218
|.||.||||||.|||||||.||.||.||||||||.||.|||||.||.|||
BL00605___opu 1169 CGATCCTTGATCTGGTCGGCTATGCGTGGGCCGGGTTTGGTTCTGCATTC 1218
BSNT_01145___ 1219 GGACCTGCGATTCTGCTCAGTCTGTATTGGAAACGAATGAACGAATGGGG 1268
|||||.||.||.||.|||||..||||.|||||.||.||||||.|.|||||
BL00605___opu 1219 GGACCCGCCATCCTTCTCAGCTTGTACTGGAAGCGGATGAACCAGTGGGG 1268
BSNT_01145___ 1269 CGCGCTTGCTGCCATGATTGTCGGGGCTGCGACCGTGTTGATCTGGATTA 1318
|||..|.||.|..||||||...|||||.|.|||||||.||||.||||||.
BL00605___opu 1269 CGCATTGGCCGGGATGATTACAGGGGCCGTGACCGTGCTGATTTGGATTC 1318
BSNT_01145___ 1319 CAACCGGCCTG--GCAAAATCAACCGGTGTGTACGAAATCATCCCTGGGT 1366
..||||||||| |.|.|| .||.|||.|.||.|||||.|||||| |||
BL00605___opu 1319 TGACCGGCCTGCAGGAGAA--GACGGGTATCTATGAAATGATCCCT-GGT 1365
BSNT_01145___ 1367 TTATT-CTCAGTATGATTGCCG-----GCATCATTGTCAGCATGATC--- 1407
||.|| ||.||..||||||.|| || |||||||||||||
BL00605___opu 1366 TTCTTCCTGAGCTTGATTGTCGTTTACGC-----TGTCAGCATGATCACG 1410
BSNT_01145___ 1408 -ACAAAACGTCCTGCAAAAGCCTCTTACCGAT-TATTCGGTGTCATGGAA 1455
||||| ||.|||||||...| .|..||| |.||.|..|..||||||
BL00605___opu 1411 AACAAA----CCGGCAAAAGAGGC-AAGAGATATGTTTGAAGAAATGGAA 1455
BSNT_01145___ 1456 AAGCTGTTAAAACGCAAAAAG-----------TAA 1479
.|| |||||..|.| |||
BL00605___opu 1456 CAG--------ACGCATGAGGAAGAACATTCTTAA 1482
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