Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01148 and BL00602
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence dna-align/BSNT_01148___gatB.1.5803.seq
# -bsequence dna-align/BL00602___gatB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01148___gatB-BL00602___gatB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01148___gatB-BL00602___gatB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01148___gatB
# 2: BL00602___gatB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1436
# Identity: 1218/1436 (84.8%)
# Similarity: 1218/1436 (84.8%)
# Gaps: 10/1436 ( 0.7%)
# Score: 5224.5
#
#
#=======================================
BSNT_01148___ 1 TTGAACTTTGAAACGGTAATCGGACTTGAAGTCCACGTTGAGTTAAAAAC 50
.|||||||||||||||||||||||||||||||||||||.|||.|.|||||
BL00602___gat 1 ATGAACTTTGAAACGGTAATCGGACTTGAAGTCCACGTGGAGCTCAAAAC 50
BSNT_01148___ 51 AAAATCAAAAATTTTCTCAAGCTCTCCAACGCCATTCGGCGCGGAGGCGA 100
||||||.|||||||||||.||.||||||||||||||||||||||.|||.|
BL00602___gat 51 AAAATCGAAAATTTTCTCCAGTTCTCCAACGCCATTCGGCGCGGCGGCCA 100
BSNT_01148___ 101 ATACGCAGACAAGCGTTATTGACCTCGGATATCCGGGCGTCCTGCCTGTT 150
|.|||||||||||||||||.|||.|.||.|||||.||.||.||||||||.
BL00602___gat 101 ACACGCAGACAAGCGTTATCGACTTAGGCTATCCAGGTGTACTGCCTGTG 150
BSNT_01148___ 151 CTGAACAAAGAAGCCGTTGAATTCGCAATGAAAGCCGCTATGGCGCTCAA 200
.||||||||||||||||..|.|||||.|||||||||||.|||||||||||
BL00602___gat 151 TTGAACAAAGAAGCCGTCAATTTCGCGATGAAAGCCGCAATGGCGCTCAA 200
BSNT_01148___ 201 CTGTGAGATCGCAACGGATACGAAGTTTGACCGCAAAAACTATTTCTATC 250
|||.||.||.||.||.||||||||.||.|||||.||||||||||||||.|
BL00602___gat 201 CTGCGAAATTGCGACAGATACGAAATTCGACCGGAAAAACTATTTCTACC 250
BSNT_01148___ 251 CTGACAACCCGAAAGCGTATCAGATTTCTCAATTTGATAAGCCAATCGGC 300
|.||||||||||||||.|||||.|||||.|||||||||||.||.||||||
BL00602___gat 251 CCGACAACCCGAAAGCTTATCAAATTTCACAATTTGATAAACCGATCGGC 300
BSNT_01148___ 301 GAAAACGGCTGGATCGAAATTGAAGTCGGCGGCAAAACAAAACGCATCGG 350
||||||||||||||||||||.|||||||||||.|||||.||.||||||||
BL00602___gat 301 GAAAACGGCTGGATCGAAATCGAAGTCGGCGGAAAAACGAAGCGCATCGG 350
BSNT_01148___ 351 CATCACGCGCCTTCATCTTGAAGAGGATGCCGGAAAACTGACGCATACGG 400
|||.||.|||||||||.|.|||||||||||.|||||||||||||||||.|
BL00602___gat 351 CATTACCCGCCTTCATTTGGAAGAGGATGCGGGAAAACTGACGCATACAG 400
BSNT_01148___ 401 GCGACGGCTATTCTCTTGTTGACTTCAACCGTCAAGGAACGCCGCTTGTT 450
||||||||||.||.|||||.||||..|||||.||.|||||.|||||.|||
BL00602___gat 401 GCGACGGCTACTCCCTTGTCGACTATAACCGCCAGGGAACACCGCTCGTT 450
BSNT_01148___ 451 GAGATCGTATCAGAGCCGGACATCCGCACGCCGGAAGAAGCGTACGCGTA 500
||.|||||.||.|||||.||.|||.|.|||||.||||||||.|||||.||
BL00602___gat 451 GAAATCGTCTCCGAGCCCGATATCAGAACGCCTGAAGAAGCTTACGCCTA 500
BSNT_01148___ 501 TCTTGAAAAGCTGAAATCCATCATCCAGTATACAGGCGTTTCTGACTGTA 550
.||||||||.||||||||.|||||.||||||||||||||.||.||.||||
BL00602___gat 501 CCTTGAAAAACTGAAATCAATCATTCAGTATACAGGCGTGTCCGATTGTA 550
BSNT_01148___ 551 AAATGGAAGAAGGCTCACTTCGCTGTGACGCCAATATCTCTCTTCGTCCG 600
|.||||||||.||.||.||.|||||.||||||||.|||||.||.||||||
BL00602___gat 551 AGATGGAAGAGGGGTCGCTCCGCTGCGACGCCAACATCTCGCTCCGTCCG 600
BSNT_01148___ 601 ATCGGCCAAGAGGAATTTGGCACAAAAACAGAATTGAAAAACTTGAACTC 650
|||||.||||||||.||.||.|||||.|||||..||||||||.|||||||
BL00602___gat 601 ATCGGACAAGAGGAGTTCGGTACAAAGACAGAGCTGAAAAACCTGAACTC 650
BSNT_01148___ 651 CTTTGCGTTTGTTCAAAAAGGCCTTGAGCATGAAGAAAAACGCCAGGAGC 700
.||.||.|||||||||||||||||||||||.||||||||||||||||.||
BL00602___gat 651 ATTCGCCTTTGTTCAAAAAGGCCTTGAGCACGAAGAAAAACGCCAGGCGC 700
BSNT_01148___ 701 AGGTTCTTCTTTCCGGCGGCGTCATCCAGCAAGAAACTCGCCGTTATGAT 750
||||||||.|.||.|||||.|||||.|||||.||.||.|||||.||||||
BL00602___gat 701 AGGTTCTTTTGTCAGGCGGTGTCATTCAGCAGGAGACGCGCCGCTATGAT 750
BSNT_01148___ 751 GAAGCAACGAAGAAAACCATTCTTATGCGTGTCAAAGAGGGATCTGACGA 800
|||||..|.||.|..||.|||.|.|||.|.||||||||||||||||||||
BL00602___gat 751 GAAGCGTCCAAAACGACGATTTTGATGAGGGTCAAAGAGGGATCTGACGA 800
BSNT_01148___ 801 CTACCGTTACTTCCCAGAGCCGGATCTAGTCGAGCTCTACATTGATGATG 850
||||||.||||||||.|||||.|||||.||||||||.|||||.||.||.|
BL00602___gat 801 CTACCGCTACTTCCCTGAGCCTGATCTTGTCGAGCTTTACATAGACGACG 850
BSNT_01148___ 851 AATGGAAGGAACGCGTAAAAGCAAGCATTCCTGAGCTTCCGGATGAGCGC 900
|.||||||.|||||||.||||..||||||||||||||||||||.||||||
BL00602___gat 851 AGTGGAAGCAACGCGTGAAAGACAGCATTCCTGAGCTTCCGGACGAGCGC 900
BSNT_01148___ 901 CGCAAGCGTTATATCGAAGAGCTTGGCTTGCCTGCATATGACGCGATGGT 950
||||||||.||.|||||||||||||||.|.|||||.||||||||||..||
BL00602___gat 901 CGCAAGCGCTACATCGAAGAGCTTGGCCTCCCTGCCTATGACGCGAAAGT 950
BSNT_01148___ 951 TCTGACGCTGACAAAAGAAATGGCTGATTTCTTCGAAGAAACCGTTCAAA 1000
.|||||..||||||||||||||.|.||.||||||||||...|||||.|||
BL00602___gat 951 GCTGACTTTGACAAAAGAAATGTCCGACTTCTTCGAAGCGGCCGTTGAAA 1000
BSNT_01148___ 1001 AAGGCGCTGAAGCCAAACAAGCGTCTAACTGGCTGATGGGTGAAGTGTCA 1050
|||||||.||.||.||.|..|||||.||||||||||||||||||||.||.
BL00602___gat 1001 AAGGCGCAGACGCGAAGCTGGCGTCGAACTGGCTGATGGGTGAAGTATCG 1050
BSNT_01148___ 1051 GCTTACCTAAACGCTGAGCAAAAAGAGCTTGCCGATGTTGCCCTGACACC 1100
||||||.|.|||||..||||||||||||||||.|||||.|..||.|||||
BL00602___gat 1051 GCTTACTTGAACGCCCAGCAAAAAGAGCTTGCGGATGTCGAACTCACACC 1100
BSNT_01148___ 1101 TGAAGGCCTTGCCGGCATGATCAAATTGATTGAAAAAGGAACCATTTCTT 1150
|||||||||||||||..||.||||..||||.|||||||||||.|||||.|
BL00602___gat 1101 TGAAGGCCTTGCCGGATTGGTCAAGCTGATCGAAAAAGGAACGATTTCAT 1150
BSNT_01148___ 1151 CTAAGATCGCGAAGAAAGTGTTTAAAGAATTGATTGAAAAAGGCGGCGAC 1200
|.||.||||||||.||.||.||.|||||||||||||||||||||||.|||
BL00602___gat 1151 CGAAAATCGCGAAAAAGGTCTTCAAAGAATTGATTGAAAAAGGCGGAGAC 1200
BSNT_01148___ 1201 GCTGAGAAGATTGTGAAAGAGAAAGGCCTTGTTCAGATTTCTGACGAAG- 1249
||.||.||.||.||.|||||.|||||||||||.||.||.||||||||||
BL00602___gat 1201 GCAGAAAAAATCGTCAAAGAAAAAGGCCTTGTGCAAATCTCTGACGAAGC 1250
BSNT_01148___ 1250 ---GCGTGCTTCTG-AAGCTTGTCACTGAGGCGCTTGACAACAATCCTCA 1295
|| ||.| |||||||||||.||.|||||.|||||||||||.||
BL00602___gat 1251 GACGC-----TCAGAAAGCTTGTCACAGAAGCGCTCGACAACAATCCGCA 1295
BSNT_01148___ 1296 ATCAATCGAAGACTTTAAAAACGGAAAAGACCGCGCGATCGGCTTCCTAG 1345
||||||||||||||||||||||||||||||||||||||||||||||||.|
BL00602___gat 1296 ATCAATCGAAGACTTTAAAAACGGAAAAGACCGCGCGATCGGCTTCCTTG 1345
BSNT_01148___ 1346 TCGGACAGATTATGAAAGCGTCCAAAGGACAAGCCAACCCGCCGATGGTC 1395
||||.||.||.||||||||.||.|||||||||||.|||||||||||||||
BL00602___gat 1346 TCGGCCAAATCATGAAAGCCTCAAAAGGACAAGCGAACCCGCCGATGGTC 1395
BSNT_01148___ 1396 AACAAAATTCTGCTTGAAGAAATTAAAAAACGCTAA 1431
|||||..||||.|||||||||||.||.|||||.|||
BL00602___gat 1396 AACAAGCTTCTTCTTGAAGAAATCAATAAACGATAA 1431
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