Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01147 and BL00601
See
Amino acid alignment /
Visit
BSNT_01147 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:40
# Commandline: needle
# -asequence dna-align/BSNT_01147___gatA.1.5803.seq
# -bsequence dna-align/BL00601___gatA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01147___gatA-BL00601___gatA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01147___gatA-BL00601___gatA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01147___gatA
# 2: BL00601___gatA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1466
# Identity: 1195/1466 (81.5%)
# Similarity: 1195/1466 (81.5%)
# Gaps: 16/1466 ( 1.1%)
# Score: 4842.5
#
#
#=======================================
BSNT_01147___ 1 ATGTCATTATTTGATCATAAAATCACAGAATTAAAACAGCTCATACATAA 50
||||||.|.|||||.||||||||..|.||||||||||..|||||||||||
BL00601___gat 1 ATGTCACTGTTTGACCATAAAATATCTGAATTAAAACGTCTCATACATAA 50
BSNT_01147___ 51 AAAAGAGATTAAGATTTCTGATCTGGTTGACGAATCTTATAAACGCATCC 100
.||||||||.|..||.||.|||.|.||.||.||||||||.|||||.||.|
BL00601___gat 51 TAAAGAGATCAGCATATCAGATTTAGTCGATGAATCTTACAAACGGATTC 100
BSNT_01147___ 101 AAGCGGTTGATGATAAGGTACAAGCCTTTTTG--GCATTAGATGAAGAAA 148
|.|..|||||.|..|||||||||||||||||| || |.||||||||||
BL00601___gat 101 ACGAAGTTGACGGAAAGGTACAAGCCTTTTTGCAGC--TTGATGAAGAAA 148
BSNT_01147___ 149 GAGCGCGCGCATACGCGACGGAGCTTGATGAGGCGGTTGACGGCCGTTCT 198
.|||.||||||||.||.|..||..|.||.||.|||.||||...|||...|
BL00601___gat 149 AAGCCCGCGCATATGCCAAAGAATTGGACGAAGCGCTTGATACCCGGGAT 198
BSNT_01147___ 199 GAGCACGGTCTTCTTTTCGGTATGCCGATCGGCGTAAAAGATAATATCGT 248
||||||||||||||||||||.||||||||||||.|.||.||.||||||||
BL00601___gat 199 GAGCACGGTCTTCTTTTCGGGATGCCGATCGGCATTAAGGACAATATCGT 248
BSNT_01147___ 249 AACAAAAGGGCTGCGCACAACATGCTCCAGCAAAATTCTCGAAAACTTTG 298
||||||||..|||||.|||||.|||.|.||||||||||||||.||.||||
BL00601___gat 249 AACAAAAGATCTGCGGACAACGTGCGCAAGCAAAATTCTCGAGAATTTTG 298
BSNT_01147___ 299 ATCCGATTTATGACGCTACTGTCGTTCAGCGCCTTCAAGACGCTGAAGCG 348
|||||||.|||||.||.||.||.|||.||||.|||||.||.|||||||||
BL00601___gat 299 ATCCGATCTATGATGCAACCGTTGTTGAGCGTCTTCATGAAGCTGAAGCG 348
BSNT_01147___ 349 GTCACAATCGGAAAACTGAACATGGACGAATTCGCCATGGGGTCATCTAC 398
||.||.||||||||.|||||.|||||.||||||||.|||||.||.||.||
BL00601___gat 349 GTTACCATCGGAAAGCTGAATATGGATGAATTCGCGATGGGCTCTTCCAC 398
BSNT_01147___ 399 CGAAAACTC-TGCTT--ACAAGCTGACGAAAAACCCTTGGAACCTGGATA 445
.||.||||| .|||| |.|| |||.||||||||.||||||||.||.|
BL00601___gat 399 AGAGAACTCAGGCTTTAAAAA---GACAAAAAACCCGTGGAACCTCGAAA 445
BSNT_01147___ 446 CAGTTCCCGGCGGTTCAAGCGGCGGATCTGCGGCTGCGGTTGCTGCGGGA 495
|.|||||.|||||.||||||||.||.||.||||||||||||||.||.||.
BL00601___gat 446 CTGTTCCTGGCGGATCAAGCGGAGGCTCAGCGGCTGCGGTTGCGGCCGGG 495
BSNT_01147___ 496 GAAGTTCCGTTTTCTCTTGGATCTGACACAGGCGGCTCCATCCGTCAGCC 545
|||||.||||||||.||||||||||||||.|||||.||.||.||.|||||
BL00601___gat 496 GAAGTGCCGTTTTCACTTGGATCTGACACGGGCGGATCGATTCGCCAGCC 545
BSNT_01147___ 546 GGCTTCTTTCTGCGGCGTTGTCGGATTAAAACCTACATACGGCCGTGTAT 595
|||.||||||||||||||.|||||.|||||.|||||||||||.||.||.|
BL00601___gat 546 GGCATCTTTCTGCGGCGTCGTCGGCTTAAAGCCTACATACGGACGCGTTT 595
BSNT_01147___ 596 CTCGTTACGGACTGGTCGCATTTGCGTCTTCATTAGACCAAATCGGACCG 645
|..|.|||||.||.|||||||||||.||||||||.||.||||||||.|||
BL00601___gat 596 CCAGATACGGCCTTGTCGCATTTGCATCTTCATTGGATCAAATCGGCCCG 645
BSNT_01147___ 646 ATTACACGTACGGTTGAGGATAACGCGTTTTTACTTCAAGCGATTTCTGG 695
||.|||.|..|.||.||.||.|||||.|...|.||.||.||||||||.||
BL00601___gat 646 ATCACAAGATCTGTCGAAGACAACGCCTACCTTCTGCAGGCGATTTCAGG 695
BSNT_01147___ 696 CGTAGATAAAATGGACTCCACGAGTGCAAATGTGGACGTGCCTGATTTTC 745
|||.||.||||||||.||.|||||.||.|||||||||||||||||.|..|
BL00601___gat 696 CGTTGACAAAATGGATTCAACGAGCGCCAATGTGGACGTGCCTGACTACC 745
BSNT_01147___ 746 TTTCTTCATTAACTGGCGACATCAAAGGACTGAAAATCGCCGTTCCGAAA 795
|.|||.|..|.||.|||||.||.|||||..|.||||||||||||||||||
BL00601___gat 746 TGTCTGCGCTGACAGGCGATATTAAAGGCTTAAAAATCGCCGTTCCGAAA 795
BSNT_01147___ 796 GAATACCTTGGTGAAGGTGTCGGCAAAGAAGCGAGAG-AATCTGT-CTTG 843
|||||.||.||.|||||.||..||.||||||||| || |.||.|| |||
BL00601___gat 796 GAATATCTCGGCGAAGGGGTAAGCGAAGAAGCGA-AGCAGTCCGTGCTT- 843
BSNT_01147___ 844 GCAGCGCTGAAAGTCCTTGAAGGTCTCGGCGCTACATGGGAAGAAGTGTC 893
|.||||||||||||.||.|||.|.||.|||||.|||||||||||.||.||
BL00601___gat 844 GAAGCGCTGAAAGTGCTCGAAAGCCTTGGCGCGACATGGGAAGAGGTATC 893
BSNT_01147___ 894 TCTTCCGCACAGTAAATACGCGCTTGCGACATATTACCTGCTGTCATCTT 943
.|||||||||||.|||||||||||.|||||.||.||||||||.||.||.|
BL00601___gat 894 GCTTCCGCACAGCAAATACGCGCTGGCGACTTACTACCTGCTTTCTTCAT 943
BSNT_01147___ 944 CTGAAGCGTCAGCGAACCTTGCACGCTTTGACGGCATCCGCTACGGCTAC 993
||||||||||.||.|||.|.||.|||||.|||||||||||||||||||||
BL00601___gat 944 CTGAAGCGTCGGCAAACTTGGCGCGCTTCGACGGCATCCGCTACGGCTAC 993
BSNT_01147___ 994 CGCACAGACAACGCGGATAACCTGATCGACCTTTACAAGCAAACACGCGC 1043
|||||.|||||.||.||.||||||||||||||.|||||.||.||.||..|
BL00601___gat 994 CGCACGGACAATGCCGACAACCTGATCGACCTGTACAAACAGACGCGTTC 1043
BSNT_01147___ 1044 TGAAGGTTTTGGAAATGAAGTCAAACGCCGCATCATGCTTGGAACGTTTG 1093
.|||||.||.|||||.|||||||||||||||||||||||.||.|||||||
BL00601___gat 1044 CGAAGGATTCGGAAACGAAGTCAAACGCCGCATCATGCTCGGTACGTTTG 1093
BSNT_01147___ 1094 CTTTAAGCTCAGGCTACTACGATGCGTACTACAAAAAAGCGCAAAAAGTG 1143
||.|.|||||.|||||.|||||.||.|||||.|||||||||||.|||||.
BL00601___gat 1094 CTCTGAGCTCCGGCTATTACGACGCATACTATAAAAAAGCGCAGAAAGTC 1143
BSNT_01147___ 1144 CGTACGTTGATTAAGAAGGATTTTGAAGACGTATTTGAAAAATATGATGT 1193
.|.|||.||||.||.|||||.||||||||||||||||.|||.|||||.||
BL00601___gat 1144 AGAACGCTGATCAAAAAGGACTTTGAAGACGTATTTGCAAACTATGACGT 1193
BSNT_01147___ 1194 TATTGTTGGACCGACTACACCGACACCTGCGTTTAAAATCGGTGAAAACA 1243
.||..|.||||||||.||.|||||.||.||.|||||||||||.|||||.|
BL00601___gat 1194 CATCATCGGACCGACAACGCCGACGCCGGCATTTAAAATCGGCGAAAAAA 1243
BSNT_01147___ 1244 CGAAGGATCCGCTCACAATGTACGCAAACGATATCTTAACGATTCCGGTC 1293
|||..||||||||.||.||||||||.|||||.|||.|.||||||||.|||
BL00601___gat 1244 CGAGCGATCCGCTGACCATGTACGCCAACGACATCCTGACGATTCCTGTC 1293
BSNT_01147___ 1294 AACCTTGCCGGCGTACCGGGAATCAGCGTGCCATGCGGATTAGCAGACGG 1343
||||||||.|||||.||||||||||||||.||.||||||||.||..||||
BL00601___gat 1294 AACCTTGCGGGCGTTCCGGGAATCAGCGTACCGTGCGGATTTGCGAACGG 1343
BSNT_01147___ 1344 ACTT-CCGCTCGGCCTGCAAATCATCGGAAATCACTTTGACGAAAGCACT 1392
||| |||||||||||||||||||||||.||.|||||||||||||||||.
BL00601___gat 1344 -CTTGCCGCTCGGCCTGCAAATCATCGGCAAACACTTTGACGAAAGCACA 1392
BSNT_01147___ 1393 GTATACCGCGTTGCTCATGCATTTGAACAAGCGACAGACCATCATAAAGC 1442
|||||||||||.||.||.|||||.|||||.|||||||||||.||||||||
BL00601___gat 1393 GTATACCGCGTCGCCCACGCATTCGAACAGGCGACAGACCACCATAAAGC 1442
BSNT_01147___ 1443 AAAACCTGAACTGTAA 1458
||||||||||||||||
BL00601___gat 1443 AAAACCTGAACTGTAA 1458
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.