Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01146 and BL00600

See Amino acid alignment / Visit BSNT_01146 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:40
# Commandline: needle
#    -asequence dna-align/BSNT_01146___gatC.1.5803.seq
#    -bsequence dna-align/BL00600___gatC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01146___gatC-BL00600___gatC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01146___gatC-BL00600___gatC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01146___gatC
# 2: BL00600___gatC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     234/291 (80.4%)
# Similarity:   234/291 (80.4%)
# Gaps:           0/291 ( 0.0%)
# Score: 942.0
# 
#
#=======================================

BSNT_01146___      1 ATGTCACGAATTTCAATAGAAGAAGTAAAGCACGTTGCGCACCTTGCAAG     50
                     |||||.||.|||||.|||||||||||||||||.||.||.||.|||||.||
BL00600___gat      1 ATGTCGCGTATTTCTATAGAAGAAGTAAAGCATGTCGCCCATCTTGCCAG     50

BSNT_01146___     51 ACTTGCGATTACTGAAGAAGAAGCAAAAATGTTCACTGAACAGCTCGACA    100
                     |||.||||||||.||.||.|||||....|||||.||.||||||||.||||
BL00600___gat     51 ACTGGCGATTACGGACGAGGAAGCGGCGATGTTTACCGAACAGCTTGACA    100

BSNT_01146___    101 GTATCATTTCATTTGCCGAGGAGCTTAATGAGGTTAACACAGACAATGTG    150
                     |.||.|||||||||||.||.|||||.||.||.||..|.|||||.|||||.
BL00600___gat    101 GCATTATTTCATTTGCAGAAGAGCTGAACGAAGTCGATACAGAGAATGTT    150

BSNT_01146___    151 GAGCCTACAACTCACGTGCTGAAAATGAAAAATGTCATGAGAGAAGATGA    200
                     .|.||.|||||.|||||..||.|||||||.|||.|||||||.|||||||.
BL00600___gat    151 AAACCAACAACGCACGTATTGCAAATGAAGAATATCATGAGGGAAGATGT    200

BSNT_01146___    201 AGCGGGTAAAGGTCTTCCGGTTGAGGATGTCATGAAAAATGCGCCTGACC    250
                     |.|.|.||||||.|||||||||||.||.|||.|.||||||||||||||.|
BL00600___gat    201 ACCTGATAAAGGGCTTCCGGTTGAAGACGTCGTCAAAAATGCGCCTGATC    250

BSNT_01146___    251 ATAAAGACGGCTATATTCGTGTGCCATCAATTCTGGACTAA    291
                     |||||||||||||.||.||.|||||.|||||..||||||||
BL00600___gat    251 ATAAAGACGGCTACATCCGCGTGCCGTCAATCTTGGACTAA    291


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