Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03146 and BL00585

See Amino acid alignment / Visit BSNT_03146 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:48
# Commandline: needle
#    -asequence dna-align/BSNT_03146___dhaS.1.5803.seq
#    -bsequence dna-align/BL00585___dhaS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03146___dhaS-BL00585___dhaS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03146___dhaS-BL00585___dhaS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03146___dhaS
# 2: BL00585___dhaS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1503
# Identity:    1147/1503 (76.3%)
# Similarity:  1147/1503 (76.3%)
# Gaps:          30/1503 ( 2.0%)
# Score: 4265.5
# 
#
#=======================================

BSNT_03146___      1 ATGAGTTCTTTAACGATGCAAGTGACGAAAAGGCTGGAGACATTTTTACA     50
                     ||||||||.|||||||||||.||.|..||.|.|||||||.|||||||.||
BL00585___dha      1 ATGAGTTCATTAACGATGCAGGTCAGTAAGAAGCTGGAGTCATTTTTGCA     50

BSNT_03146___     51 GGGAACAAAGAAGCTTTATATTGACGGTAAGTTTGTTCCGAGTGCCTCAG    100
                     |||||||||||||||.||||||.||||..|.|||||..|.||.||||||.
BL00585___dha     51 GGGAACAAAGAAGCTCTATATTAACGGGGAATTTGTAGCCAGCGCCTCAA    100

BSNT_03146___    101 GGGCAACCTTTGACACTCCAAACCCGGCGACCGGCGAAAC-CTTGATGAC    149
                     ....|||.|||||.||.||||||||||||||.||.||||| ||.| ..||
BL00585___dha    101 ACAAAACGTTTGAGACCCCAAACCCGGCGACTGGTGAAACGCTCG-CCAC    149

BSNT_03146___    150 GCTGTATGAAGCCCAGG--CTGCGGATGTGGACAAAGCGGTTAAAGCTGC    197
                     |.|.|||||||  ||||  |.|.|||||||||||||||.||.||||||||
BL00585___dha    150 GTTATATGAAG--CAGGTCCCGAGGATGTGGACAAAGCTGTAAAAGCTGC    197

BSNT_03146___    198 CCGGAAAGCCTTTGACCAAGGTGAATGGAGAACAATGTCTCCAGCTTCG-    246
                     .|||.||||||||||||..|||||.|||.|.||.|||...||.||  || 
BL00585___dha    198 GCGGGAAGCCTTTGACCGCGGTGAGTGGCGGACGATGAACCCTGC--CGA    245

BSNT_03146___    247 -AGAAGCAGACTGATGTATAAGCTGGCGGACTTAATGGAAGAGCATAAAA    295
                      ||||||.|.||||||||.||.||.||.||..|.|||||.||.|||||||
BL00585___dha    246 AAGAAGCCGGCTGATGTACAAACTCGCCGATCTGATGGAGGAACATAAAA    295

BSNT_03146___    296 CTGAGCTTGCTCAGCTTGAAACACTTGATAATGGGAAACCGATCAATGAA    345
                     |.||.||.||||||||||||||.||.|||||.||.||.|||||||..|||
BL00585___dha    296 CGGAACTGGCTCAGCTTGAAACGCTGGATAACGGAAAGCCGATCAGCGAA    345

BSNT_03146___    346 ACGACTAATGGAGATATTCCGCTGGCTATTGAGCATATGCGCTATTACGC    395
                     |||||....||.||||||||||||.|.|||||.||||||||||||||.||
BL00585___dha    346 ACGACCGCAGGCGATATTCCGCTGTCAATTGAACATATGCGCTATTATGC    395

BSNT_03146___    396 CGGCTGGTGTACAAAAATAACAGGACAGACGATTCCGGTTTCCGGCGCTT    445
                     .||||||...||.||||||||.||||||||.|||||.|||..|||..|||
BL00585___dha    396 GGGCTGGGCGACGAAAATAACCGGACAGACAATTCCTGTTAACGGACCTT    445

BSNT_03146___    446 ATTTTAATTATACGCGTCATGAGCCTGTCGGTGTCGTCGGCCAGATCATT    495
                     |||||||.|||||.||.||||||||||||||.||.|||||.||.||.||.
BL00585___dha    446 ATTTTAACTATACACGGCATGAGCCTGTCGGAGTTGTCGGGCAAATTATC    495

BSNT_03146___    496 CCATGGAATTTCCCGCTCCTGATGGCGATGTGGAAAATGGGCGCGGCACT    545
                     ||.|||||.||||||||.||||||||.||||||||||||||.||.||.||
BL00585___dha    496 CCTTGGAACTTCCCGCTTCTGATGGCTATGTGGAAAATGGGAGCCGCCCT    545

BSNT_03146___    546 TGCAACAGGCTGTACAATCGTCCTCAAACCGGCTGAACAAACACCGCTTT    595
                     ||||.|.||.|||||..|.|||.|.|||||||||||||||||.|||||||
BL00585___dha    546 TGCAGCCGGATGTACGGTTGTCTTAAAACCGGCTGAACAAACGCCGCTTT    595

BSNT_03146___    596 CAGCTCTTTATTTGGCAGAATTAATTGACCAAGCCGGTTTCCCTGCCGGT    645
                     |.|||||.|||||.||.||..|.||.||..|.||.||.|||||....||.
BL00585___dha    596 CCGCTCTGTATTTAGCTGAGCTGATCGATGAGGCAGGCTTCCCGAAAGGC    645

BSNT_03146___    646 GTAATCAACATCATCCCGGGATTCGGTGAAGA-TGCGGGAGAAGCGCTGA    694
                     ||.||||||||||||||.||.||.|| |.||| .||.||||||||.||||
BL00585___dha    646 GTCATCAACATCATCCCTGGCTTTGG-GGAGACGGCCGGAGAAGCTCTGA    694

BSNT_03146___    695 CGAACCACGAAGCGGTTGATAAAATTGCCTTTACCGGTTCCACTGAAATC    744
                     |..||||.|.....||.||.|||.|.||.||.||.||.||.|||||||||
BL00585___dha    695 CCGACCATGCCCTTGTCGACAAACTGGCATTCACAGGGTCAACTGAAATC    744

BSNT_03146___    745 GGAAAGAAAATCATGTCCACCGCAGCGAAAAGCATTAAGCGTGTTACATT    794
                     ||.||.||.||.|||...|..||.||.|||....|.||.||||||||..|
BL00585___dha    745 GGCAAAAAGATAATGGAGAAAGCGGCCAAATCGGTCAAACGTGTTACCCT    794

BSNT_03146___    795 GGAGCTGGGCGGAAAATCACCTAATATTCTTCTGCCGGATGCGAATTTGA    844
                     .|||||.||||||||.||.||.|||||..|.||.||.||.||..|..|||
BL00585___dha    795 TGAGCTCGGCGGAAAGTCGCCGAATATCATCCTCCCTGACGCCGACCTGA    844

BSNT_03146___    845 AAAAAGCCATCCCGGGCGCTTTAAACGGTGTGATGTTTAACCAGGGCCAA    894
                     |.|||||.||.||.|||||..|||.|||.||.|||||.||||||||||||
BL00585___dha    845 AGAAAGCGATTCCAGGCGCACTAACCGGCGTTATGTTCAACCAGGGCCAA    894

BSNT_03146___    895 GTCTGCTGTGCGGGCTCACGTGTCTTCATTCATAAAGACCAATATGATGA    944
                     ||.|||||||||||.||.||.||.|||||.|||||||||||||||||..|
BL00585___dha    895 GTTTGCTGTGCGGGATCGCGCGTTTTCATCCATAAAGACCAATATGACAA    944

BSNT_03146___    945 AGTTGTTGATGAAATGGCGTCCTATGCTGAGTCACTCCGCCAAGGAGCGG    994
                     |||.||||||||||||||..|.|||.|..|.||.|||||||||||.||||
BL00585___dha    945 AGTCGTTGATGAAATGGCCGCTTATTCAAAATCGCTCCGCCAAGGTGCGG    994

BSNT_03146___    995 GACTTCATAAAGATACTCAAATCGGGCCTCTCGTAAGCAAGGAACAGCAT   1044
                     |.||||||.||||.||.|||||.||.||.||.||.|||||.|||||||||
BL00585___dha    995 GCCTTCATGAAGACACGCAAATGGGACCGCTTGTCAGCAAAGAACAGCAT   1044

BSNT_03146___   1045 GAGCGCGTTCTTTCCTATATTCAAAAAGGAAAAGATGAAGGAGC-AAAAG   1093
                     ||.|||||.||.||.||||||.||||||||....|.||.||.|| ||||.
BL00585___dha   1045 GAACGCGTCCTCTCGTATATTGAAAAAGGACGCCAGGAGGGTGCGAAAAT   1094

BSNT_03146___   1094 CAGTGACCGGCGGAAGCTGTCCTTTTGAAGCA-GGATATTTTGTCGCACC   1142
                     | |.|.|||||||||..||.||||.|||| || |||||.|||||..|.||
BL00585___dha   1095 C-GCGGCCGGCGGAACATGCCCTTATGAA-CAGGGATACTTTGTTTCTCC   1142

BSNT_03146___   1143 GACTGTGTTTGCGAATGTTGAAGACGAAATGACCATCGCAAAAGAAGAAA   1192
                     ||||||.||..|.|||||.||.||.||.|||||.||.|||||||||||||
BL00585___dha   1143 GACTGTATTCACAAATGTCGAGGATGAGATGACAATAGCAAAAGAAGAAA   1192

BSNT_03146___   1193 TTTTCGGACCCGTGCTGACTGCAATTCCGTACGAAACAGTCGATGAAGTT   1242
                     |.|||||.||.||..||.|.||.|||||.||.|||||.||.||||||||.
BL00585___dha   1193 TCTTCGGTCCTGTTTTGGCGGCGATTCCTTATGAAACGGTTGATGAAGTC   1242

BSNT_03146___   1243 ATTGAACGGGCAAACCATTCA--GAATATGGGCTTGCAGCCGGACTATGG   1290
                     ||.||||||||.||.|  .||  |||||.||.||.||.||.||..|||||
BL00585___dha   1243 ATCGAACGGGCCAATC--GCAGCGAATACGGCCTCGCTGCGGGCGTATGG   1290

BSNT_03146___   1291 ACAGAGAACGTCAAGCAGGCTCACTATATCGCGGACCGACTTCAAGCCGG   1340
                     ||.||.||..|.||..|.||.|||||||||||.|||||.||.||||||||
BL00585___dha   1291 ACGGAAAATTTGAAAAACGCCCACTATATCGCCGACCGTCTGCAAGCCGG   1340

BSNT_03146___   1341 AACCGTTTGGGTCAACTGCTATAATGTGTTTGACGCGGCGTCTCCATTTG   1390
                     .|||||||||||||||||||||||||..||||||||.||.||.|||||.|
BL00585___dha   1341 TACCGTTTGGGTCAACTGCTATAATGCTTTTGACGCCGCATCCCCATTCG   1390

BSNT_03146___   1391 GCGGTTATAAACAGTCAGGACTCGGACGAGAAATGGGATCATATGCCTTG   1440
                     ||||.||.||||||||.|||||||||||.||||||||.|||||.||..||
BL00585___dha   1391 GCGGCTACAAACAGTCTGGACTCGGACGTGAAATGGGCTCATACGCTCTG   1440

BSNT_03146___   1441 GATAATTACACAGAAGTCAAAAGTGTATGGGT--AAACCTTGAAGACTAA   1488
                     |||||.||.|||||.||.||.||.||.|||.|  |.||     ||.|.||
BL00585___dha   1441 GATAACTATACAGAGGTTAAGAGCGTCTGGATTCATAC-----AGGCGAA   1485

BSNT_03146___   1488 ---   1488
                        
BL00585___dha   1486 TAA   1488


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