Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03146 and BL00585
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence dna-align/BSNT_03146___dhaS.1.5803.seq
# -bsequence dna-align/BL00585___dhaS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03146___dhaS-BL00585___dhaS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03146___dhaS-BL00585___dhaS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03146___dhaS
# 2: BL00585___dhaS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1503
# Identity: 1147/1503 (76.3%)
# Similarity: 1147/1503 (76.3%)
# Gaps: 30/1503 ( 2.0%)
# Score: 4265.5
#
#
#=======================================
BSNT_03146___ 1 ATGAGTTCTTTAACGATGCAAGTGACGAAAAGGCTGGAGACATTTTTACA 50
||||||||.|||||||||||.||.|..||.|.|||||||.|||||||.||
BL00585___dha 1 ATGAGTTCATTAACGATGCAGGTCAGTAAGAAGCTGGAGTCATTTTTGCA 50
BSNT_03146___ 51 GGGAACAAAGAAGCTTTATATTGACGGTAAGTTTGTTCCGAGTGCCTCAG 100
|||||||||||||||.||||||.||||..|.|||||..|.||.||||||.
BL00585___dha 51 GGGAACAAAGAAGCTCTATATTAACGGGGAATTTGTAGCCAGCGCCTCAA 100
BSNT_03146___ 101 GGGCAACCTTTGACACTCCAAACCCGGCGACCGGCGAAAC-CTTGATGAC 149
....|||.|||||.||.||||||||||||||.||.||||| ||.| ..||
BL00585___dha 101 ACAAAACGTTTGAGACCCCAAACCCGGCGACTGGTGAAACGCTCG-CCAC 149
BSNT_03146___ 150 GCTGTATGAAGCCCAGG--CTGCGGATGTGGACAAAGCGGTTAAAGCTGC 197
|.|.||||||| |||| |.|.|||||||||||||||.||.||||||||
BL00585___dha 150 GTTATATGAAG--CAGGTCCCGAGGATGTGGACAAAGCTGTAAAAGCTGC 197
BSNT_03146___ 198 CCGGAAAGCCTTTGACCAAGGTGAATGGAGAACAATGTCTCCAGCTTCG- 246
.|||.||||||||||||..|||||.|||.|.||.|||...||.|| ||
BL00585___dha 198 GCGGGAAGCCTTTGACCGCGGTGAGTGGCGGACGATGAACCCTGC--CGA 245
BSNT_03146___ 247 -AGAAGCAGACTGATGTATAAGCTGGCGGACTTAATGGAAGAGCATAAAA 295
||||||.|.||||||||.||.||.||.||..|.|||||.||.|||||||
BL00585___dha 246 AAGAAGCCGGCTGATGTACAAACTCGCCGATCTGATGGAGGAACATAAAA 295
BSNT_03146___ 296 CTGAGCTTGCTCAGCTTGAAACACTTGATAATGGGAAACCGATCAATGAA 345
|.||.||.||||||||||||||.||.|||||.||.||.|||||||..|||
BL00585___dha 296 CGGAACTGGCTCAGCTTGAAACGCTGGATAACGGAAAGCCGATCAGCGAA 345
BSNT_03146___ 346 ACGACTAATGGAGATATTCCGCTGGCTATTGAGCATATGCGCTATTACGC 395
|||||....||.||||||||||||.|.|||||.||||||||||||||.||
BL00585___dha 346 ACGACCGCAGGCGATATTCCGCTGTCAATTGAACATATGCGCTATTATGC 395
BSNT_03146___ 396 CGGCTGGTGTACAAAAATAACAGGACAGACGATTCCGGTTTCCGGCGCTT 445
.||||||...||.||||||||.||||||||.|||||.|||..|||..|||
BL00585___dha 396 GGGCTGGGCGACGAAAATAACCGGACAGACAATTCCTGTTAACGGACCTT 445
BSNT_03146___ 446 ATTTTAATTATACGCGTCATGAGCCTGTCGGTGTCGTCGGCCAGATCATT 495
|||||||.|||||.||.||||||||||||||.||.|||||.||.||.||.
BL00585___dha 446 ATTTTAACTATACACGGCATGAGCCTGTCGGAGTTGTCGGGCAAATTATC 495
BSNT_03146___ 496 CCATGGAATTTCCCGCTCCTGATGGCGATGTGGAAAATGGGCGCGGCACT 545
||.|||||.||||||||.||||||||.||||||||||||||.||.||.||
BL00585___dha 496 CCTTGGAACTTCCCGCTTCTGATGGCTATGTGGAAAATGGGAGCCGCCCT 545
BSNT_03146___ 546 TGCAACAGGCTGTACAATCGTCCTCAAACCGGCTGAACAAACACCGCTTT 595
||||.|.||.|||||..|.|||.|.|||||||||||||||||.|||||||
BL00585___dha 546 TGCAGCCGGATGTACGGTTGTCTTAAAACCGGCTGAACAAACGCCGCTTT 595
BSNT_03146___ 596 CAGCTCTTTATTTGGCAGAATTAATTGACCAAGCCGGTTTCCCTGCCGGT 645
|.|||||.|||||.||.||..|.||.||..|.||.||.|||||....||.
BL00585___dha 596 CCGCTCTGTATTTAGCTGAGCTGATCGATGAGGCAGGCTTCCCGAAAGGC 645
BSNT_03146___ 646 GTAATCAACATCATCCCGGGATTCGGTGAAGA-TGCGGGAGAAGCGCTGA 694
||.||||||||||||||.||.||.|| |.||| .||.||||||||.||||
BL00585___dha 646 GTCATCAACATCATCCCTGGCTTTGG-GGAGACGGCCGGAGAAGCTCTGA 694
BSNT_03146___ 695 CGAACCACGAAGCGGTTGATAAAATTGCCTTTACCGGTTCCACTGAAATC 744
|..||||.|.....||.||.|||.|.||.||.||.||.||.|||||||||
BL00585___dha 695 CCGACCATGCCCTTGTCGACAAACTGGCATTCACAGGGTCAACTGAAATC 744
BSNT_03146___ 745 GGAAAGAAAATCATGTCCACCGCAGCGAAAAGCATTAAGCGTGTTACATT 794
||.||.||.||.|||...|..||.||.|||....|.||.||||||||..|
BL00585___dha 745 GGCAAAAAGATAATGGAGAAAGCGGCCAAATCGGTCAAACGTGTTACCCT 794
BSNT_03146___ 795 GGAGCTGGGCGGAAAATCACCTAATATTCTTCTGCCGGATGCGAATTTGA 844
.|||||.||||||||.||.||.|||||..|.||.||.||.||..|..|||
BL00585___dha 795 TGAGCTCGGCGGAAAGTCGCCGAATATCATCCTCCCTGACGCCGACCTGA 844
BSNT_03146___ 845 AAAAAGCCATCCCGGGCGCTTTAAACGGTGTGATGTTTAACCAGGGCCAA 894
|.|||||.||.||.|||||..|||.|||.||.|||||.||||||||||||
BL00585___dha 845 AGAAAGCGATTCCAGGCGCACTAACCGGCGTTATGTTCAACCAGGGCCAA 894
BSNT_03146___ 895 GTCTGCTGTGCGGGCTCACGTGTCTTCATTCATAAAGACCAATATGATGA 944
||.|||||||||||.||.||.||.|||||.|||||||||||||||||..|
BL00585___dha 895 GTTTGCTGTGCGGGATCGCGCGTTTTCATCCATAAAGACCAATATGACAA 944
BSNT_03146___ 945 AGTTGTTGATGAAATGGCGTCCTATGCTGAGTCACTCCGCCAAGGAGCGG 994
|||.||||||||||||||..|.|||.|..|.||.|||||||||||.||||
BL00585___dha 945 AGTCGTTGATGAAATGGCCGCTTATTCAAAATCGCTCCGCCAAGGTGCGG 994
BSNT_03146___ 995 GACTTCATAAAGATACTCAAATCGGGCCTCTCGTAAGCAAGGAACAGCAT 1044
|.||||||.||||.||.|||||.||.||.||.||.|||||.|||||||||
BL00585___dha 995 GCCTTCATGAAGACACGCAAATGGGACCGCTTGTCAGCAAAGAACAGCAT 1044
BSNT_03146___ 1045 GAGCGCGTTCTTTCCTATATTCAAAAAGGAAAAGATGAAGGAGC-AAAAG 1093
||.|||||.||.||.||||||.||||||||....|.||.||.|| ||||.
BL00585___dha 1045 GAACGCGTCCTCTCGTATATTGAAAAAGGACGCCAGGAGGGTGCGAAAAT 1094
BSNT_03146___ 1094 CAGTGACCGGCGGAAGCTGTCCTTTTGAAGCA-GGATATTTTGTCGCACC 1142
| |.|.|||||||||..||.||||.|||| || |||||.|||||..|.||
BL00585___dha 1095 C-GCGGCCGGCGGAACATGCCCTTATGAA-CAGGGATACTTTGTTTCTCC 1142
BSNT_03146___ 1143 GACTGTGTTTGCGAATGTTGAAGACGAAATGACCATCGCAAAAGAAGAAA 1192
||||||.||..|.|||||.||.||.||.|||||.||.|||||||||||||
BL00585___dha 1143 GACTGTATTCACAAATGTCGAGGATGAGATGACAATAGCAAAAGAAGAAA 1192
BSNT_03146___ 1193 TTTTCGGACCCGTGCTGACTGCAATTCCGTACGAAACAGTCGATGAAGTT 1242
|.|||||.||.||..||.|.||.|||||.||.|||||.||.||||||||.
BL00585___dha 1193 TCTTCGGTCCTGTTTTGGCGGCGATTCCTTATGAAACGGTTGATGAAGTC 1242
BSNT_03146___ 1243 ATTGAACGGGCAAACCATTCA--GAATATGGGCTTGCAGCCGGACTATGG 1290
||.||||||||.||.| .|| |||||.||.||.||.||.||..|||||
BL00585___dha 1243 ATCGAACGGGCCAATC--GCAGCGAATACGGCCTCGCTGCGGGCGTATGG 1290
BSNT_03146___ 1291 ACAGAGAACGTCAAGCAGGCTCACTATATCGCGGACCGACTTCAAGCCGG 1340
||.||.||..|.||..|.||.|||||||||||.|||||.||.||||||||
BL00585___dha 1291 ACGGAAAATTTGAAAAACGCCCACTATATCGCCGACCGTCTGCAAGCCGG 1340
BSNT_03146___ 1341 AACCGTTTGGGTCAACTGCTATAATGTGTTTGACGCGGCGTCTCCATTTG 1390
.|||||||||||||||||||||||||..||||||||.||.||.|||||.|
BL00585___dha 1341 TACCGTTTGGGTCAACTGCTATAATGCTTTTGACGCCGCATCCCCATTCG 1390
BSNT_03146___ 1391 GCGGTTATAAACAGTCAGGACTCGGACGAGAAATGGGATCATATGCCTTG 1440
||||.||.||||||||.|||||||||||.||||||||.|||||.||..||
BL00585___dha 1391 GCGGCTACAAACAGTCTGGACTCGGACGTGAAATGGGCTCATACGCTCTG 1440
BSNT_03146___ 1441 GATAATTACACAGAAGTCAAAAGTGTATGGGT--AAACCTTGAAGACTAA 1488
|||||.||.|||||.||.||.||.||.|||.| |.|| ||.|.||
BL00585___dha 1441 GATAACTATACAGAGGTTAAGAGCGTCTGGATTCATAC-----AGGCGAA 1485
BSNT_03146___ 1488 --- 1488
BL00585___dha 1486 TAA 1488
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