Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03144 and BL00580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence dna-align/BSNT_03144___yozC.1.5803.seq
# -bsequence dna-align/BL00580___yozC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03144___yozC-BL00580___yozC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03144___yozC-BL00580___yozC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03144___yozC
# 2: BL00580___yozC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity: 157/221 (71.0%)
# Similarity: 157/221 (71.0%)
# Gaps: 28/221 (12.7%)
# Score: 555.0
#
#
#=======================================
BSNT_03144___ 1 ATGATTCATAAAAATTGGCTTGAA-AAAGAAACAATTAAAAAAGTAAAGT 49
|||||||||.||||.|||| .||| ||..||||.||||||||||||||
BL00580___yoz 1 ATGATTCATGAAAAATGGC-AGAACAATAAAACCATTAAAAAAGTAAA-- 47
BSNT_03144___ 50 GTGTGCAGACAAAC----GCAAAAAAATATATCGTAAAC----CGCGTTT 91
|||||.|||.|| ||.|||||.||||||||.||| ||| |
BL00580___yoz 48 --GTGCATACATACCGATGCCAAAAAGTATATCGTCAACAGAGCGC---T 92
BSNT_03144___ 92 TAACGCCGGGAAAAGAATATGAAGTAAAAAATGAAACAGAGGAGTTTCTC 141
.|.||.|||.||.| .|||.||.||.|||||.|||||.|..||.|||.|.
BL00580___yoz 93 GACCGTCGGTAACA-TATACGAGGTCAAAAACGAAACGGGAGAATTTTTG 141
BSNT_03144___ 142 TTTGTGGTCGACAATACGAATAAAGTCGGCGGCTATTATAAAGAATACTT 191
|||.|..||||.|||||.||.|||||||||||||||||.|||||||||||
BL00580___yoz 142 TTTATCATCGATAATACAAACAAAGTCGGCGGCTATTACAAAGAATACTT 191
BSNT_03144___ 192 CGAAGAGATGTAA-------- 204
.|| |||.||||
BL00580___yoz 192 TGA--AGAAGTAAAAGCCTGA 210
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