Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02383 and BL00557

See Amino acid alignment / Visit BSNT_02383 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:55
# Commandline: needle
#    -asequence dna-align/BSNT_02383___moeB.1.5803.seq
#    -bsequence dna-align/BL00557___moeB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02383___moeB-BL00557___moeB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02383___moeB-BL00557___moeB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02383___moeB
# 2: BL00557___moeB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1069
# Identity:     725/1069 (67.8%)
# Similarity:   725/1069 (67.8%)
# Gaps:         104/1069 ( 9.7%)
# Score: 2318.5
# 
#
#=======================================

BSNT_02383___      1 ATGGAGGAACGTTATTCACGGCAAATCAGATTTAAGCAAATTGGGGAAGA     50
                     |||.|.|||||.||||||.|.||||||||||.|.|..|.||.||..|.|.
BL00557___moe      1 ATGCATGAACGGTATTCAAGACAAATCAGATATCAAAACATCGGACAGGC     50

BSNT_02383___     51 GGGCCAGAAAAGA--CTGGCAGACAGCCATGTGCTGATTGTCGGAGCGGG     98
                     |||.|||.|.|||  |.|||||  ||||||||..||||.|||||.||.||
BL00557___moe     51 GGGTCAGGACAGAATCAGGCAG--AGCCATGTTTTGATCGTCGGGGCCGG     98

BSNT_02383___     99 AGCGCTCGGCACTGCAGGAGCTGAAGGACTTTCGAGAGCGGGAGTCGGTA    148
                     .|||||.|||||..|||..||||||||.|||..|.|.||.||..||||..
BL00557___moe     99 GGCGCTTGGCACGTCAGCCGCTGAAGGGCTTGTGCGCGCAGGCATCGGCG    148

BSNT_02383___    149 CGATTACCATTATTGACCGTGACTATGTGGAGTGGAGCAATCTT-CAAAG    197
                     |..|..|.|||||.|||||.||.||||||||.|||||||| ||| |||||
BL00557___moe    149 CACTGTCTATTATAGACCGCGATTATGTGGAATGGAGCAA-CTTGCAAAG    197

BSNT_02383___    198 GCAGCAGCTTTATACAGAAAGCGATGC----CAAACTCCGCATGCCGAAA    243
                     |||||||||.||.|||||.|..||.||    .|||    |..|.||||||
BL00557___moe    198 GCAGCAGCTCTACACAGAGAAAGACGCGGAGGAAA----GGCTTCCGAAA    243

BSNT_02383___    244 GCCATGGCTGCCAAAGAGCATCTATCAGCGATTAACAGCGAGATACATAT    293
                     ||...||||||.|||||.|.|||.||.|.|||.|||||||      .|.|
BL00557___moe    244 GCGGCGGCTGCAAAAGAACGTCTTTCCGAGATCAACAGCG------GTGT    287

BSNT_02383___    294 TGAG------GCGTATGTTACCGAAGGAACAGCCGAAACGCTTGAG-CCG    336
                     ||||      .|.||||||.|.||.||.||||..|||||.| |.|| |||
BL00557___moe    288 TGAGCTTCGTACATATGTTGCAGACGGCACAGTTGAAACAC-TCAGACCG    336

BSNT_02383___    337 CTGATTGAAAAAGCAGATGTCGTGATCGACGCGACAGATAATTTTGAAAC    386
                     |||||.|||.|.||.||||.|||.||.||.||.||.|||||.|||||.||
BL00557___moe    337 CTGATCGAAGAGGCGGATGCCGTCATTGATGCAACGGATAACTTTGAGAC    386

BSNT_02383___    387 CCGCATGCTGATAAACGATCTTGCCCAGAAAACAAAGACACCTTGGGTCT    436
                     |||||||.|.||.||.||.|||||.|||.|.||....||.||.|||||.|
BL00557___moe    387 CCGCATGATCATCAATGACCTTGCGCAGGAGACGGGTACTCCGTGGGTTT    436

BSNT_02383___    437 ATGGCGCCTGTGTAAGCAGCCAGGGAATGTTCATGACTGTCATTCCCGGA    486
                     |.|||||.|||||.|||||.|||||.||||..|||||..|.||||||..|
BL00557___moe    437 ACGGCGCTTGTGTCAGCAGTCAGGGCATGTATATGACGATTATTCCCCAA    486

BSNT_02383___    487 GAAACCCCTTGTCTGTCTTGTTTGTTTGAGCAAATTCCTGTCGGCGGGGC    536
                     .||||.||.||.||..|.||..|||||||..|..||||..|.||||||||
BL00557___moe    487 AAAACGCCATGCCTTGCCTGCCTGTTTGAAGATGTTCCGATTGGCGGGGC    536

BSNT_02383___    537 GACGTGTGATACTGCCGGCATTATTCCGCCTGCTGTGCATATCGTTTCAG    586
                     .||.||.|||||..|.||.||||||.||||.||.||.||.||.||.||.|
BL00557___moe    537 TACATGCGATACGTCGGGGATTATTTCGCCGGCCGTTCAAATGGTGTCGG    586

BSNT_02383___    587 CATATCAGCAGGCTGAGGCATTAAAGCTGTTAACCGGCCAAAAAGAAG--    634
                     |.||||||||.|||||....|||||..|.|||||.||.||..||||||  
BL00557___moe    587 CTTATCAGCAAGCTGAAATTTTAAAAATCTTAACTGGACAGCAAGAAGCG    636

BSNT_02383___    635 ---CAATACAGCGGGGTTTTGTGACATTTGATGTCTG---GAACA---AT    675
                        ||| ||.||    ||||||.||.||||||.|.||   |||||   ||
BL00557___moe    637 CTTCAA-ACTGC----TTTTGTCACGTTTGATTTATGGGCGAACACCCAT    681

BSNT_02383___    676 --TCGCATATGAAGATTAACGTTAATCATGTACGCCG---TGAGGAATGC    720
                       ||||  |||.||||   ||            ||||   ||||.||||.
BL00557___moe    682 TATCGC--ATGCAGAT---CG------------GCCGCAATGAGAAATGT    714

BSNT_02383___    721 CCATCTTGCGGAGCTAATG-CGGTATATCCTTATCTTCAGGATTGGAACA    769
                     ||.||.||||||| .||.| ||||.||||||| ||.||||.|       |
BL00557___moe    715 CCTTCGTGCGGAG-AAACGCCGGTTTATCCTT-TCCTCAGCA-------A    755

BSNT_02383___    770 CA----CCA----AAAGCTGCTGTACTATGCGGCCGTGACACAGTGCAGG    811
                     ||    |||    |||||.|..||.||.|||||..|.||.||.||.||..
BL00557___moe    756 CATGAGCCAAAAGAAAGCCGACGTGCTGTGCGGAAGAGAGACCGTCCAAA    805

BSNT_02383___    812 TAAGGTCAG---AATCATTAAAAAGAATCCCGAAACAGGAGCTCATTAAG    858
                     |..|  |||   ||| .||||||.|..|.||.|||.||||||||||.|| 
BL00557___moe    806 TTCG--CAGCGAAAT-GTTAAAACGGCTGCCTAAAGAGGAGCTCATGAA-    851

BSNT_02383___    859 CGGCTGAAAAC-------AATCGGCAAGGTCGAGGCTAATGCGTTTTTGC    901
                           |||.|       .|||||.||.||.||.||.||||..|.|||||
BL00557___moe    852 ------AAAGCTTTCGGTCATCGGAAAAGTGGATGCGAATGATTATTTGC    895

BSNT_02383___    902 TGCATATTTTTTACGAGGATTTCAGAATTGTCATTTTCAGTGACGGACGG    951
                     |||||.|....||.||||..||||||||.||.|||||||..||.|||.|.
BL00557___moe    896 TGCATGTACAATATGAGGCGTTCAGAATCGTTATTTTCAACGATGGAAGA    945

BSNT_02383___    952 GCACTGGTGCATGGAACAAATGATGTGAAAGAAGCCAACTCCGTGTTGGC   1001
                     ||.||.||.||.||.|||||||||.|.|||||||||||||||.|.|||||
BL00557___moe    946 GCCCTTGTTCACGGCACAAATGATATAAAAGAAGCCAACTCCATATTGGC    995

BSNT_02383___   1002 AAGAGTGATTGGACTGTAA   1020
                     .|||||.||.|||.|||||
BL00557___moe    996 GAGAGTCATCGGAATGTAA   1014


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.