Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02390 and BL00553

See Amino acid alignment / Visit BSNT_02390 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence dna-align/BSNT_02390___moaD.1.5803.seq
#    -bsequence dna-align/BL00553___moaD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02390___moaD-BL00553___moaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02390___moaD-BL00553___moaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02390___moaD
# 2: BL00553___moaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     160/254 (63.0%)
# Similarity:   160/254 (63.0%)
# Gaps:          40/254 (15.7%)
# Score: 440.5
# 
#
#=======================================

BSNT_02390___      1 ATGATTAAAATTCTTTTATTTG--CAGGACTGGCTGAACAGGCCGGTACA     48
                     .|||||||||||.|..|.||||  |||  ||.||.|||||.||.|||.|.
BL00553___moa      1 TTGATTAAAATTTTGCTGTTTGCCCAG--CTTGCGGAACAAGCGGGTGCG     48

BSNT_02390___     49 CA-AGCAATAGAAATAGATGTGGAACAAG-CAACCACAGATGAAATAAAA     96
                     || || .||.||.|||||||..||| ||| |.||.|||||.||.||.|.|
BL00553___moa     49 CAGAG-TATCGATATAGATGAAGAA-AAGACGACAACAGACGAGATTAGA     96

BSNT_02390___     97 GCGAGTCTAAAAGAACAATACGGTCTTGAATCT-------ATTGATACGG    139
                     ..|..|.||||||||...|||       |||||       |..||...||
BL00553___moa     97 CAGTTTTTAAAAGAAACGTAC-------AATCTTCAGGGGACGGACCGGG    139

BSNT_02390___    140 CTATGATTGCCGTTAACGAAAGCTATGT----AAAAGAAAATACCTCTGT    185
                     |.|||||.||.||.||||||    .|||    ||.||.|||     |.||
BL00553___moa    140 CGATGATCGCTGTGAACGAA----GTGTACAGAAGAGGAAA-----CAGT    180

BSNT_02390___    186 ---ATC--TTCGGGTGACACGGTAGCCATCATACCGCCGGTCAGCGGGGG    230
                        .||  .|||||.||.|||||.||..|.||.||.|||||||||||.||
BL00553___moa    181 GAGGTCGAGTCGGGAGATACGGTTGCTTTTATTCCCCCGGTCAGCGGAGG    230

BSNT_02390___    231 ATGA    234
                     ||||
BL00553___moa    231 ATGA    234


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