Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05220 and BL00543
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:20
# Commandline: needle
# -asequence dna-align/BSNT_05220.1.5803.seq
# -bsequence dna-align/BL00543.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05220-BL00543.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05220-BL00543.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05220
# 2: BL00543
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 258
# Identity: 200/258 (77.5%)
# Similarity: 200/258 (77.5%)
# Gaps: 0/258 ( 0.0%)
# Score: 768.0
#
#
#=======================================
BSNT_05220 1 ATGCAAGACGTTTTAATTTTCGCGACTGTACTGGCGCCTATTTTAACGGC 50
|||.||||.||.|||.|.||.||||||||..|||||||.||..|||||||
BL00543 1 ATGGAAGAAGTATTATTATTTGCGACTGTGTTGGCGCCCATCCTAACGGC 50
BSNT_05220 51 GCTTGTTCAACTCGTTAAGAAAACGGTTAAGCTTCCAACTAATGTAATCC 100
||||||||||||.||||||||||||.||||..|.||.||.|||||..|.|
BL00543 51 GCTTGTTCAACTTGTTAAGAAAACGATTAACATGCCGACCAATGTTGTGC 100
BSNT_05220 101 CGGCCATAAGCTTCGTAATTGGTATCGGATTGGGCGCGGTAGCATATCCG 150
|.||..|.||||||||..|.||.||||.|.|.||.||.||.||.||||||
BL00543 101 CTGCGGTTAGCTTCGTTTTAGGAATCGCACTCGGAGCCGTGGCCTATCCG 150
BSNT_05220 151 TTTACTGACCTCGACTTGGTGCTGCGGCTATGGGCCGGCGGCTTTGCGGG 200
|||||.||||||||..|.||..|||||.|.|||||||||||.||||||||
BL00543 151 TTTACGGACCTCGAACTAGTATTGCGGTTGTGGGCCGGCGGTTTTGCGGG 200
BSNT_05220 201 ATTAGCTGCGACAGGTCTTTTTGAACTCGGAGCCAAACGCGAAGGTACAA 250
|.|.||||||||.||||||||.||..||||.||.|||||.|||||.||.|
BL00543 201 ACTGGCTGCGACGGGTCTTTTCGAGATCGGCGCAAAACGTGAAGGAACGA 250
BSNT_05220 251 CGAAATAA 258
|.||.|||
BL00543 251 CCAAGTAA 258
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