Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00065 and BL00539

See Amino acid alignment / Visit BSNT_00065 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence dna-align/BSNT_00065___yaaT.1.5803.seq
#    -bsequence dna-align/BL00539___yaaT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00065___yaaT-BL00539___yaaT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00065___yaaT-BL00539___yaaT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00065___yaaT
# 2: BL00539___yaaT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 828
# Identity:     657/828 (79.3%)
# Similarity:   657/828 (79.3%)
# Gaps:           0/828 ( 0.0%)
# Score: 2601.0
# 
#
#=======================================

BSNT_00065___      1 TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTA     50
                     ||||||||.||.|||||||||||||||||.||||||||.|||||||||||
BL00539___yaa      1 TTGTACAACGTTATTGGTGTCCGCTTTAAAAAAGCGGGCAAAATATATTA     50

BSNT_00065___     51 TTTTGATCCGAATGGATTTCATATAGAACATGACAGCTGCGTAATTGTAG    100
                     |||.||||||||.||||||||.|||||..|.||||||||.||.||.||.|
BL00539___yaa     51 TTTCGATCCGAACGGATTTCAGATAGATAAAGACAGCTGTGTGATCGTCG    100

BSNT_00065___    101 AAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAG    150
                     ||||.||..|.||.|||||.|||||.|||||.||.|||||.||.||..|.
BL00539___yaa    101 AAACGGTTCGCGGTGTTGAATACGGGCAGGTTGTCATTGCCAACAAGAAA    150

BSNT_00065___    151 GTGGATGAGCATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGC    200
                     ||.||.|||.|.|||||.|||||.||..|..||||||||||..|.||.||
BL00539___yaa    151 GTAGACGAGAACGATGTCGTGCTGCCTTTAAGAAAAGTGATCAGAGTTGC    200

BSNT_00065___    201 TGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAGGAAGCACTAT    250
                     .||.||.|||||.|..||.||.||.||.||.|||.||.|.|..||.||.|
BL00539___yaa    201 GGATGAACGCGACCGCCTGATCGTTGAGGAGAATCAAGAAGCTGCGCTGT    250

BSNT_00065___    251 CAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATG    300
                     |.||.||||||.|||||||.||.||.||.|..|||||.|||.|.||.|||
BL00539___yaa    251 CCGCCTTTGATGTCTGCCAGAAAAAGGTTAACGAGCACGGCCTTGAGATG    300

BSNT_00065___    301 AAGCTGGTCGATGTTGAATTCACGTTTGATCGCAATAAAGTCATTTTTTA    350
                     ||.|||||||||||.||||||||.|||||.|||||.||||||||||||||
BL00539___yaa    301 AAACTGGTCGATGTGGAATTCACTTTTGACCGCAACAAAGTCATTTTTTA    350

BSNT_00065___    351 CTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG    400
                     .||.||.|||||.||..|||||||.||||||||.||.||.||.|||||||
BL00539___yaa    351 TTTTACGGCTGATGGAAGAGTCGATTTTAGAGAACTCGTCAAAGATTTGG    400

BSNT_00065___    401 CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGAT    450
                     |.||.||||||||.||.|||||.||||||.|.||||||||.||.||.|||
BL00539___yaa    401 CATCGATCTTTAAAACGAGAATCGAGCTGAGACAAATCGGCGTCAGAGAT    450

BSNT_00065___    451 GAGGCAAAAATGCTCGGAGGAATCGGTCCTTGCGGAAGAATGCTTTGCTG    500
                     ||.||.||.||||||||.||.|||||.||.||.|||||||||||||||||
BL00539___yaa    451 GAAGCGAAGATGCTCGGCGGTATCGGACCGTGTGGAAGAATGCTTTGCTG    500

BSNT_00065___    501 TTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGG    550
                     |||.||||||.|.||.||||||||.||||||||.|||||||||||.||||
BL00539___yaa    501 TTCCACGTTTTTAGGTGATTTTGAGCCCGTTTCTATTAAAATGGCAAAGG    550

BSNT_00065___    551 ATCAGAACTTGTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGA    600
                     ||||.||..||||..|.|||||.|||||||||||.||.||.||||||||.
BL00539___yaa    551 ATCAAAATCTGTCGCTGAATCCGACGAAGATTTCCGGACTATGCGGACGG    600

BSNT_00065___    601 TTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGACGGCAAAAGA    650
                     .||||||||||||||||.|||||.||||||||.||.||.||.||.|||||
BL00539___yaa    601 CTGATGTGCTGTCTAAAGTATGAAAACGATGAATACGAAACAGCCAAAGA    650

BSNT_00065___    651 ACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGA    700
                     |||||||||||||||.||.|||.||||..|.||..|.|.|||.||.||.|
BL00539___yaa    651 ACAGCTTCCGGATATCGGGGAAGTGATCGCCACGTCCAGCGGCCCGGCAA    700

BSNT_00065___    701 AGGTCGTCGGACTAAATATTCTGGAACGGGTGCTTCAGGTGGAACTGATA    750
                     |.||||||||..|.||||||||.|||||..|.||.|||||.|||||||.|
BL00539___yaa    701 AAGTCGTCGGGTTGAATATTCTCGAACGCATTCTCCAGGTTGAACTGACA    750

BSNT_00065___    751 AACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG    800
                     .||.|.||.|||||..|.||||||||.|||||.|||||.|||.||||.||
BL00539___yaa    751 GACTGCGACAAAGTTGTTGAATATACGTGGGATGAGCTGTTGCAAGAAGG    800

BSNT_00065___    801 CGTCGTATCCGCACAAACCACAGATTAA    828
                     .||||||||.||||||||||||||||||
BL00539___yaa    801 TGTCGTATCTGCACAAACCACAGATTAA    828


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