Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00070 and BL00535
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:43
# Commandline: needle
# -asequence dna-align/BSNT_00070___yabC.1.5803.seq
# -bsequence dna-align/BL00535___yabC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00070___yabC-BL00535___yabC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00070___yabC-BL00535___yabC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00070___yabC
# 2: BL00535___yabC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 906
# Identity: 647/906 (71.4%)
# Similarity: 647/906 (71.4%)
# Gaps: 54/906 ( 6.0%)
# Score: 2199.5
#
#
#=======================================
BSNT_00070___ 1 ---ATGTTAAGGCGCCAAATGAGCTTTAATGGAAAGTCGGACATGGGAAT 47
||..|.|..||.||||.|||.|||.|...|||.||.||||||||.||
BL00535___yab 1 TTGATTATCAACCGGCAAAAGAGTTTTGACCAAAAATCAGACATGGGTAT 50
BSNT_00070___ 48 TCTTTACTTGGTCCCAACCCCAATCGGAAATCTAGAGGACATGACATTCC 97
..|.||..|.||.||.||.||.|||||.|||.|||||||.||||||||.|
BL00535___yab 51 GTTATATCTCGTACCGACTCCCATCGGCAATTTAGAGGATATGACATTTC 100
BSNT_00070___ 98 GGGCGATCGACACGCTG----AAATCAGTAGATGCG------ATTGCTGC 137
|||||.| ..||| ||| |||.||| ||.||.||
BL00535___yab 101 GGGCGGT-----TTCTGTGTTAAA-----AGAGGCGGACATTATCGCGGC 140
BSNT_00070___ 138 GGAAGATACGAGGCAAACGAAAAAGCTTTGTCATGTATATGAAATTGAAA 187
|||.|||||||||||.|||||.||..|.||.|||||.|||||||||||.|
BL00535___yab 141 GGAGGATACGAGGCAGACGAAGAAATTGTGCCATGTGTATGAAATTGAGA 190
BSNT_00070___ 188 CACCGCTCGTCAGCTATCACGAACACAATAAAGAAAGCAGTGGGCACAAA 237
|||.|||.||||||||.||.||||||||||||||||||||.||.||.|||
BL00535___yab 191 CACAGCTTGTCAGCTACCATGAACACAATAAAGAAAGCAGCGGACATAAA 240
BSNT_00070___ 238 ATTATTGAATGGCTGAAATCGGGAAAAAACATTGCTCTTGTCAGTGATGC 287
|||.|.||||||||||||...|||||||||.|.||..|.||||||||.||
BL00535___yab 241 ATTTTGGAATGGCTGAAAGAAGGAAAAAACGTCGCATTGGTCAGTGACGC 290
BSNT_00070___ 288 CGGTCTGCCGACGATTTCTGATCCCGGAGCCGAAATTGTAAAAGATTTTA 337
|||..|||||||.||.|||||.|||||.||.|||||.||....|||||||
BL00535___yab 291 CGGAATGCCGACAATATCTGACCCCGGGGCTGAAATCGTCCGCGATTTTA 340
BSNT_00070___ 338 CGGATATAGGCGGTTATGTTGTTCCGTTGCCGGGAGCAAATGCTGCATTA 387
..||.||.|||||.|||||.||.||..||||.||.||||||||.||.||.
BL00535___yab 341 TCGAAATGGGCGGCTATGTCGTACCCCTGCCCGGTGCAAATGCGGCTTTG 390
BSNT_00070___ 388 ACAGCTCTTATTGCTTCAGGTATTGTACCGCAGCCTTTTTTCTTTTACGG 437
||.||.||.|||||.|||||.||||..||||||||.||||||||||.|||
BL00535___yab 391 ACCGCACTGATTGCCTCAGGCATTGCGCCGCAGCCGTTTTTCTTTTTCGG 440
BSNT_00070___ 438 TTTTCTCAACAGACAG-AAAAAAGAAAAGAAGAAGGAGCTTGAAGCCCTT 486
.|||.|..||.| ||| |||...||||.|||.||..||||.| ||.|.||
BL00535___yab 441 CTTTTTGGACCG-CAGCAAACGGGAAAGGAAAAAACAGCTCG-AGGCTTT 488
BSNT_00070___ 487 AAAAAAC-GGCAGGAAACGATCATTTTTTATGAAGCGCCTCACAGATTGA 535
.||.||| |.|||||||||||.||||||||.||..||||.||..|..|||
BL00535___yab 489 GAAGAACAGACAGGAAACGATGATTTTTTACGAGTCGCCGCATCGGCTGA 538
BSNT_00070___ 536 AGGAAACCTTGTCAGCGATGGCAGAGA--TATTAGGAGATCGGGAAATCG 583
|.|||||||||.|.||.|| |||||| ||||.||..|||||.||||||
BL00535___yab 539 AAGAAACCTTGGCGGCCAT--CAGAGAGGTATTCGGCAATCGGCAAATCG 586
BSNT_00070___ 584 CTGTAACGCGTGAACTCACTAAGAAATATGAAGAGTTTATCCGAGGAACG 633
|..|.||..|.||||||||.||.||||..|||||.||||||.||||..||
BL00535___yab 587 CATTGACAAGGGAACTCACGAAAAAATTCGAAGAATTTATCAGAGGTTCG 636
BSNT_00070___ 634 ATATCCGAGG------TCATTGGATGGGC-AAACGAGGATCAGATACGCG 676
|| |||.| ||| .||||.| .||| ||||.|||.|.||||
BL00535___yab 637 AT---CGAAGAAGCACTCA---CATGGTCTGAAC-AGGAACAGGTGCGCG 679
BSNT_00070___ 677 GCGAGTTTTGTCTTGTTGTAGAAGGAAGTAATAATGAAGAGGTAGATGAG 726
|.||||||||.|||||..|.||||||||...|.|.|||..|.|.||.|||
BL00535___yab 680 GAGAGTTTTGCCTTGTGATCGAAGGAAGCCGTGAAGAAACGATTGAAGAG 729
BSNT_00070___ 727 GAAGAACAATGGTGGGA--AACCCTCACTGCGAAAGAACATGTCGAGCAT 774
|..| ..|||||||| |.|..||| |..||||||||||||||||||
BL00535___yab 730 GCGG---TCTGGTGGGAGCATCTTTCA--GAAAAAGAACATGTCGAGCAT 774
BSNT_00070___ 775 TACATC-TCGAAAGGCGCTACTTCTAAAGAAGCCATTAAAAAAGCAGCAG 823
||.||| .|| ||||...|.||||.||||||||||||||||||.|.||.|
BL00535___yab 775 TATATCAGCG-AAGGATATCCTTCAAAAGAAGCCATTAAAAAAACCGCGG 823
BSNT_00070___ 824 TCGATCGCAATGTACCAAAGCGTGAAGTGTACGATGCTTACCATATTAAG 873
|.||.|||...||.||.||.||..||.|.||.||.||||||||||||.|.
BL00535___yab 824 TTGACCGCGGCGTTCCGAAACGGAAAATTTATGACGCTTACCATATTCAA 873
BSNT_00070___ 874 CAATAA 879
.|.|||
BL00535___yab 874 AACTAA 879
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