Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00072 and BL00533

See Amino acid alignment / Visit BSNT_00072 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:43
# Commandline: needle
#    -asequence dna-align/BSNT_00072___metG.1.5803.seq
#    -bsequence dna-align/BL00533___metS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00072___metG-BL00533___metS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00072___metG-BL00533___metS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00072___metG
# 2: BL00533___metS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2004
# Identity:    1538/2004 (76.7%)
# Similarity:  1538/2004 (76.7%)
# Gaps:          24/2004 ( 1.2%)
# Score: 5767.5
# 
#
#=======================================

BSNT_00072___      1 ATGCCGCAAGAAAACAATACATTTTACATTACAACACCGATTTATTATCC     50
                     ||||||||||||||.|||||.||||||||.||.|||||.||||||||.||
BL00533___met      1 ATGCCGCAAGAAAAAAATACGTTTTACATCACTACACCCATTTATTACCC     50

BSNT_00072___     51 GAGCGGAAAATTACATATCGGCCATGCATATACGACAGTCGCGGGAGATG    100
                     .||.||.||..|||||||.||.|||||.||.|||||.||.||.||.||||
BL00533___met     51 AAGTGGGAAGCTACATATTGGACATGCCTACACGACCGTTGCAGGTGATG    100

BSNT_00072___    101 CAATGGCACGTTACAAAAGACTAAAAGGGTTCGATGTTCGCTATTTAACG    150
                     |.|||||.|||||.||||||||.|.|||.||.|||||..|.||.|||||.
BL00533___met    101 CGATGGCTCGTTATAAAAGACTGAGAGGCTTTGATGTCAGATACTTAACT    150

BSNT_00072___    151 GGAACGGACGAGCATGGACAAAAGATCCAGCAAAAAGCTGAACAGGAAAA    200
                     ||.||.||.|||||.||||||||.||.|||||||..||.||..|||||||
BL00533___met    151 GGTACAGATGAGCACGGACAAAAAATTCAGCAAACGGCGGAGAAGGAAAA    200

BSNT_00072___    201 CATTACACCTCAGGAGTATGTGGATCGCGCAGCGGCAGATATTCAAAAAC    250
                     |||.||.||.|||||.|..||.|||||.||.||.|.|||.|||||..|.|
BL00533___met    201 CATCACTCCGCAGGAATTGGTCGATCGTGCGGCAGAAGACATTCAGCAGC    250

BSNT_00072___    251 TGTGGAAGCAGCTTGAAATCTCAAACGACGACTTTATCCGCACGACAGAA    300
                     |.|||||..||||.||.||.||.||.||||||||.||.||.||||||||.
BL00533___met    251 TTTGGAAAAAGCTCGACATATCCAATGACGACTTCATTCGGACGACAGAG    300

BSNT_00072___    301 AAACGGCATAAAGTTGTCATTGAAAAAGTGTTTCAAAAGCTTCTTGATAA    350
                     .||||.||||||...||.||.|||||.||.|||||.|||||.|||||.||
BL00533___met    301 GAACGTCATAAAAAAGTGATCGAAAAGGTATTTCAGAAGCTGCTTGACAA    350

BSNT_00072___    351 CGGGGACATCTATCTTGATGAGTATGAAGGCTGGTACAGCATCCCTGATG    400
                     .||.|||||.|||||||||||.|||||.||||||||||||||||||||.|
BL00533___met    351 TGGTGACATATATCTTGATGAATATGAGGGCTGGTACAGCATCCCTGACG    400

BSNT_00072___    401 AAACGTTCTACACGGAAACTCAGCTCGTTGATATTGAGCGGAATGAAAAG    450
                     |||||||.|||||.|||||.||||||||||||.|.|||||.||.||.||.
BL00533___met    401 AAACGTTTTACACCGAAACCCAGCTCGTTGATGTCGAGCGAAACGAGAAA    450

BSNT_00072___    451 GGAGAGGTCATCGGCGGAAAAAGCCCTGACAGCGGTCACCCAGTTGAATT    500
                     ||.||.||.|||||.||.|||||.|||||||||||.|||||.|||||..|
BL00533___met    451 GGCGAAGTTATCGGAGGGAAAAGTCCTGACAGCGGCCACCCCGTTGAGCT    500

BSNT_00072___    501 GATCAAAGAGGAATCTTATTTCTTCCGCATGGGGAAATACGCGGATCGTC    550
                     .|||||||||||||||||.||||||||||||||.||||||||||||||.|
BL00533___met    501 AATCAAAGAGGAATCTTACTTCTTCCGCATGGGAAAATACGCGGATCGGC    550

BSNT_00072___    551 TTCTGAAATACTATGAAGAAAA-CCCGACATTCATTCAGCCAGAATCACG    599
                     ||||....|.|||||||||||| ||.|| ||||||.|||||.|||||.||
BL00533___met    551 TTCTCGCTTTCTATGAAGAAAATCCTGA-ATTCATCCAGCCTGAATCCCG    599

BSNT_00072___    600 CAAAAACGAAATGATTAATAACTTTATCAAACCTGGACTTGAGGATTTGG    649
                     .|||||.||||||||.||.||||||||||||||.||.|||||.|||||||
BL00533___met    600 GAAAAATGAAATGATCAACAACTTTATCAAACCGGGTCTTGAAGATTTGG    649

BSNT_00072___    650 CAGTATCACGTACCACTTTTGATTGGGGCGTGAAGGTGCCGGAAAATCCA    699
                     |.||.||.||.||.||.||.||.|||||..|.||.|||||.|..|||||.
BL00533___met    650 CTGTTTCCCGGACGACGTTCGACTGGGGGATAAAAGTGCCCGGCAATCCG    699

BSNT_00072___    700 AAGCATGTTGTATATGTTTGGATTGACGCACTATTTAACTATTTAACGGC    749
                     ||||||||..|.|||||||||||.||.||.||.|||||.||..|.|||||
BL00533___met    700 AAGCATGTCATCTATGTTTGGATAGATGCGCTGTTTAATTACATTACGGC    749

BSNT_00072___    750 ACTCGGTTATGATACAGAAAATGATGAGCTTTATCAAAAATATTGGCCTG    799
                     |||.||.|.|.||||.|||||.|||||...||||||||||||||||||.|
BL00533___met    750 ACTTGGCTTTAATACGGAAAACGATGAAAATTATCAAAAATATTGGCCGG    799

BSNT_00072___    800 CCGATGTTCATTTAGTCGGTAAGGAGATTGTACGATTCCATACTATTTAC    849
                     |.||.||||||.|.||||||||||||||.||.||.||||||||.||||||
BL00533___met    800 CAGACGTTCATCTTGTCGGTAAGGAGATCGTCCGCTTCCATACCATTTAC    849

BSNT_00072___    850 TGGCCAATTATGCTGATGGCGCTGGATCTTCCGCTGCCAAAGCAAGTATT    899
                     |||||.||||||||||||||..||||.|||||||||||.||..|.||.||
BL00533___met    850 TGGCCGATTATGCTGATGGCATTGGACCTTCCGCTGCCGAAAAAGGTTTT    899

BSNT_00072___    900 CGCGCATGGCTGGCTTTTGATGAAAGACGGAAAAATGTCGAAATCAAAAG    949
                     .||.||.||.|||||..||||||||||.|||||||||||.||||||||||
BL00533___met    900 TGCCCACGGGTGGCTGCTGATGAAAGATGGAAAAATGTCTAAATCAAAAG    949

BSNT_00072___    950 GAAACGTTGTAGATCCGGTTACATTAATTGAGCGCTATGGTTTAGACGAG    999
                     |.||.||.||.||.|||||.||||||||.||..|.||.||..||||.|..
BL00533___met    950 GCAATGTGGTTGACCCGGTCACATTAATCGACAGATACGGACTAGATGCA    999

BSNT_00072___   1000 CTTCGCTATTACCTGCTTCGCGAAGTGCCGTTCGGATCTGACGGTGTTTT   1049
                     .|.||.|||||.||.||.|||||||||||||||||.||||||||.||.||
BL00533___met   1000 TTGCGTTATTATCTTCTCCGCGAAGTGCCGTTCGGTTCTGACGGCGTATT   1049

BSNT_00072___   1050 CACGCCGGAAGGATTTGTTGAGCGAATCAACTATGATTTAGCGAATGATT   1099
                     .||.||||||||||||||.|||||.||.||||||||||||||||||||||
BL00533___met   1050 TACACCGGAAGGATTTGTCGAGCGGATTAACTATGATTTAGCGAATGATT   1099

BSNT_00072___   1100 TAGGAAATCTATTGAATCGTACTGTTGCGATGATCAATAAGTATTTTGAC   1149
                     ||||.||.||..||||..|.||.||.||.|||.||||.||.||.||||||
BL00533___met   1100 TAGGCAACCTGCTGAACAGAACGGTCGCCATGGTCAACAAATACTTTGAC   1149

BSNT_00072___   1150 GGACAAATTGGTTCTTACAAAGGTGCTGTTACGGAATTTGACCAAACGCT   1199
                     ||.|..|||...||.||..||||..|.|||||.|..||||||.||.||.|
BL00533___met   1150 GGCCGGATTCAGTCGTATGAAGGCCCGGTTACCGCTTTTGACGAACCGTT   1199

BSNT_00072___   1200 CACTTC--TGTTGCTGAAGAAACAGTGAAAGCTTATGAGAAAGCAATGGA   1247
                     ..|.||  |.|.||  ||.|.|||.|..||||.||.|||.|.||.||.||
BL00533___met   1200 GTCATCATTCTCGC--AAAAGACAATTGAAGCGTACGAGCAGGCGATCGA   1247

BSNT_00072___   1248 AAATATGGAGTTCTCGGTAGCACTTTCGACTTTATGGCAGCTCATCAGCC   1297
                     ||||||||||||.||.||.||.|||||..|.||.||||||.|..|||||.
BL00533___met   1248 AAATATGGAGTTTTCCGTTGCGCTTTCATCATTGTGGCAGTTTGTCAGCA   1297

BSNT_00072___   1298 GCACAAACAAATACATTGATGAGACAGCTCCATGGGTGCTTGCGAAAGAT   1347
                     |.||.||.||||||||.||.||||||||.||.|||||.||.||.||||||
BL00533___met   1298 GAACGAATAAATACATCGACGAGACAGCCCCTTGGGTACTGGCAAAAGAT   1347

BSNT_00072___   1348 CCGGCAAAAGAAGAAGAATTGCGATCAGTTATGTATCATCTCGCTGAATC   1397
                     ..||..||||||.||||..|.|.|||.||.|||||.|||.|.||.||.||
BL00533___met   1348 AAGGATAAAGAAAAAGAGCTTCAATCGGTCATGTACCATTTGGCGGAGTC   1397

BSNT_00072___   1398 ATTGCGTATTTCAGCGGTACTGCTTCAGCCATTCTTAACAAAAACACCTG   1447
                     ||||||.||..|.||.|||.||||.|||||.||||||||..|.||.||||
BL00533___met   1398 ATTGCGCATCACTGCTGTATTGCTGCAGCCGTTCTTAACGCAGACGCCTG   1447

BSNT_00072___   1448 AAAAAATGTTCGAGCAGCTAGGCATTACTGATGACTCTCTAAAAGCTTGG   1497
                     ||||.||.||||..|||||.|||.||||.||||..||.||.|||.|.|||
BL00533___met   1448 AAAAGATTTTCGCACAGCTTGGCGTTACGGATGCGTCACTGAAAACCTGG   1497

BSNT_00072___   1498 GACAGCATT-ACAGCTTTCGGCCAGCTGAAAGATACAAAAGTACAAAAAG   1546
                     ||||||||| |.||| |||||||||||||||..|...|.|||.|||||||
BL00533___met   1498 GACAGCATTCAAAGC-TTCGGCCAGCTGAAATCTGTGACAGTTCAAAAAG   1546

BSNT_00072___   1547 GCGAGCCGTTGTTCCCTCGTTTAGAGGCAGAAGAAGAAATTGCTTACATC   1596
                     |.||.||.||||||||.|||.|.|||||.|||||.|||.|.|||||.|||
BL00533___met   1547 GAGAACCATTGTTCCCGCGTCTTGAGGCGGAAGACGAAGTCGCTTATATC   1596

BSNT_00072___   1597 AAAGGGAAAATGCAAGGTTCGGCACCAGCGAAAGAAGAAACAAGAGAAG-   1645
                     |||...||||||||.||..||||.|||   |||||||||.||    ||| 
BL00533___met   1597 AAATCAAAAATGCAGGGAACGGCTCCA---AAAGAAGAACCA----AAGC   1639

BSNT_00072___   1646 AAGAGCCGCAAGAGGTC--GATCGTTTACCTGAAATTACGATTGATCAAT   1693
                     |||||  |.||.||..|  ||.||..|.||.|||||.|||||.||..|.|
BL00533___met   1640 AAGAG--GAAAAAGCACATGAACGGCTTCCGGAAATCACGATAGACGATT   1687

BSNT_00072___   1694 TCATGGATGTAGAGCTTCGCGTAGCTGAGGTCATTGAGGCAGAGCCAGTG   1743
                     |.|||.....||||||..|.||.|||||.||||||.|.||.||.||.||.
BL00533___met   1688 TTATGAGCACAGAGCTCAGAGTGGCTGAAGTCATTCATGCTGAACCCGTC   1737

BSNT_00072___   1744 AAAAAAGCAGACCGTTTATTGAAGCTGCAGCTTGATCTTGGTTTTGAAAA   1793
                     ||||||||.||.|||.|.||.||.||.|||||||||.|.||.||||||||
BL00533___met   1738 AAAAAAGCGGATCGTCTGTTAAAACTCCAGCTTGATTTAGGCTTTGAAAA   1787

BSNT_00072___   1794 GCGCCAAGTGGTATCCGGCATTGCGAAGCATTATACGCCTGAAGAGCTTG   1843
                     .||||||||.||.||.||.|||||.|||||.||.|..|||||||||||||
BL00533___met   1788 ACGCCAAGTCGTTTCAGGAATTGCCAAGCACTACAAACCTGAAGAGCTTG   1837

BSNT_00072___   1844 TTGGAAAAAAACTCGTTTGTGTAACAAATCTAAAACCGGTTAAACTCAGA   1893
                     |.||....|||.||.||||||||||||||.||||||||||.|||||.|||
BL00533___met   1838 TCGGCCGGAAAGTCATTTGTGTAACAAATTTAAAACCGGTCAAACTAAGA   1887

BSNT_00072___   1894 GGAGAGCTTTCTCAAGGTATGATCCTTGCAGGAGAAG-CAGACGGCGTTT   1942
                     |||||.|||||||||||.|||||..|.||.|||||.| || ||||||||.
BL00533___met   1888 GGAGAACTTTCTCAAGGCATGATATTGGCTGGAGAGGACA-ACGGCGTTC   1936

BSNT_00072___   1943 TAAAGGTCGTGTCTATCGATCAG-TCGTTACCAAAAGGCACAAGAATTAA   1991
                     |...|.|.|.|.|..|.|| ||| ||.|||.||||.||.||..||||.||
BL00533___met   1937 TCTCGCTTGCGGCGGTAGA-CAGTTCATTAGCAAACGGAACGCGAATCAA   1985

BSNT_00072___   1992 ATAA   1995
                     ||||
BL00533___met   1986 ATAA   1989


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