Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00073 and BL00532

See Amino acid alignment / Visit BSNT_00073 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:44
# Commandline: needle
#    -asequence dna-align/BSNT_00073___yabD.1.5803.seq
#    -bsequence dna-align/BL00532___yabD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00073___yabD-BL00532___yabD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00073___yabD-BL00532___yabD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00073___yabD
# 2: BL00532___yabD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     602/768 (78.4%)
# Similarity:   602/768 (78.4%)
# Gaps:           0/768 ( 0.0%)
# Score: 2346.0
# 
#
#=======================================

BSNT_00073___      1 ATGTTGTTTGACACTCACGCGCATTTAAATGCAGAACAATATGATACTGA     50
                     |||||.|||||.||.||.||.||||||||.||.||.||||.|.|....||
BL00532___yab      1 ATGTTATTTGATACACATGCTCATTTAAACGCCGAGCAATTTAACGAGGA     50

BSNT_00073___     51 TCTGGATGAGGTTATTGAACGGGCAAAAGCTGAAAAAGTTGAACGAATTG    100
                     |.||||.||.||.||||..||||||||.|..||||||||.||.|..||||
BL00532___yab     51 TTTGGAAGAAGTCATTGCTCGGGCAAAGGAAGAAAAAGTGGAGCACATTG    100

BSNT_00073___    101 TCGTAGTTGGTTTTGACCGTCCGACGATTACCCGTGCGATGGAAATGATT    150
                     ||||.||.||.||.||.|||||||||||.|..||||||||||||.|||||
BL00532___yab    101 TCGTGGTAGGATTCGATCGTCCGACGATCAAGCGTGCGATGGAATTGATT    150

BSNT_00073___    151 GAGGAATATGATTTTATTTATGCAGCCATTGGCTGGCACCCTGTTGACGC    200
                     ||.|||||.||||||||||||||||||||.||.|||||.||.||||||||
BL00532___yab    151 GAAGAATACGATTTTATTTATGCAGCCATCGGGTGGCATCCGGTTGACGC    200

BSNT_00073___    201 TATTGACATGACAGAGGAAGACTTAGCGTGGATTAAAGAGCTTTCTGCTC    250
                     .|||||.|||||.||.|||||.||.||.|||||.|||||.||.||.||.|
BL00532___yab    201 AATTGATATGACCGATGAAGATTTGGCTTGGATCAAAGACCTGTCCGCCC    250

BSNT_00073___    251 ATGAGAAAGTGGTAGCGATAGGGGAAATGGGACTGGATTATCATTGGGAT    300
                     ||||||||||.||.|||||.||.|||||||||||.|||||||||||||||
BL00532___yab    251 ATGAGAAAGTTGTGGCGATCGGAGAAATGGGACTTGATTATCATTGGGAT    300

BSNT_00073___    301 AAATCACCTAAAGATATTCAAAAAGAGGTGTTTAGAAAACAAATCGCCTT    350
                     ||.||.||.||.||..||||||||||||||||.||||||||.|||||.||
BL00532___yab    301 AAGTCGCCGAAGGACGTTCAAAAAGAGGTGTTCAGAAAACAGATCGCTTT    350

BSNT_00073___    351 AGCGAAAGAGGTCAATTTGCCTATTATCATTCATAACCGTGATGCAACGG    400
                     .||.|||||.|||...|||||.||..|.|||||.||||||||||||||||
BL00532___yab    351 GGCAAAAGAAGTCGGCTTGCCAATCGTGATTCACAACCGTGATGCAACGG    400

BSNT_00073___    401 AGGATGTCGTGACCATTTTAAAAGAGGAAGGCGCAGAAGCTGTGGGCGGA    450
                     ||||||||||..|.|||||....||.|||||.||.||.|..||.|||||.
BL00532___yab    401 AGGATGTCGTTTCTATTTTGCGGGAAGAAGGGGCCGAGGAAGTCGGCGGG    450

BSNT_00073___    451 ATCATGCACTGCTTTACAGGAAGTGCGGAAGTGGCAAGAGAATGCATGAA    500
                     |||||||||||.|.|||||||||.||.|||.|.|||..|||.|||||..|
BL00532___yab    451 ATCATGCACTGTTATACAGGAAGCGCTGAAATTGCACAAGAGTGCATCGA    500

BSNT_00073___    501 AATGAATTTTTATTTGTCATTTGGAGGACCGGTGACATTTAAAAATGCGA    550
                     .||||||||.||..|.||.||.||.|||||.||.|||||||||||.||.|
BL00532___yab    501 TATGAATTTCTACCTATCTTTCGGCGGACCCGTCACATTTAAAAACGCCA    550

BSNT_00073___    551 AGAAACCGAAGGAAGTAGTGAAGGAAATTCCCAATGACCGGCTGCTGATT    600
                     |.||||||||||||||.||.||..||||.||.|||||||||||..|.|||
BL00532___yab    551 AAAAACCGAAGGAAGTGGTCAAACAAATACCAAATGACCGGCTTTTAATT    600

BSNT_00073___    601 GAAACGGACTGCCCGTTTCTCACACCGCACCCTTTCCGCGGGAAAAGAAA    650
                     ||.|||||||||||||.|.|.||.|||||.||.|.|.|.||.||..|.||
BL00532___yab    601 GAGACGGACTGCCCGTATTTAACGCCGCATCCATACAGAGGAAAGCGGAA    650

BSNT_00073___    651 TGAGCCAAGCTATGTGAAATATGTGGCAGAACAAATCGCCGAATTAAAAG    700
                     |||.||.||||||||.|||..|||.||.|||||.||.|||||||||||||
BL00532___yab    651 TGAACCTAGCTATGTCAAACTTGTCGCCGAACAGATTGCCGAATTAAAAG    700

BSNT_00073___    701 AAATGACCTTTGAAGAGATTGCGTCAATCACGACTGAAAATGCGAAAAGA    750
                     .||||||.|.||||||.||.|||.|..||||.||.||||||||.||||.|
BL00532___yab    701 GAATGACTTATGAAGAAATAGCGGCCGTCACCACAGAAAATGCAAAAAAA    750

BSNT_00073___    751 CTTTTCCGTATAAACTGA    768
                     ||||||.|.||.|.||||
BL00532___yab    751 CTTTTCGGCATCAGCTGA    768


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