Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00075 and BL00531
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:44
# Commandline: needle
# -asequence dna-align/BSNT_00075___yabE.1.5803.seq
# -bsequence dna-align/BL00531___yabE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00075___yabE-BL00531___yabE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00075___yabE-BL00531___yabE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00075___yabE
# 2: BL00531___yabE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1384
# Identity: 978/1384 (70.7%)
# Similarity: 978/1384 (70.7%)
# Gaps: 128/1384 ( 9.2%)
# Score: 3457.0
#
#
#=======================================
BSNT_00075___ 1 -------------------------------------TTG-GGAGAA--- 9
||| ||||||
BL00531___yab 1 ATGAGGTGGTTTTCCCATAATAAAAGAGATGGCGGGCTTGCGGAGAAAAT 50
BSNT_00075___ 10 AGAGAAGGGAGGGTTGACAGCCTTTTAGATACTCTATATAATCTCTCCGA 59
||||| |||||||||||||.|||.||||||||||||||||||||.||||
BL00531___yab 51 AGAGA--GGAGGGTTGACAGGCTTGTAGATACTCTATATAATCTCCCCGA 98
BSNT_00075___ 60 GGAGAAGGAGGCGTTTTTCATCACACAAAAAATGAAAAAGCTGTTTTCCG 109
|||||||||||||||||||||||.||||||||||||||||||||||||||
BL00531___yab 99 GGAGAAGGAGGCGTTTTTCATCATACAAAAAATGAAAAAGCTGTTTTCCG 148
BSNT_00075___ 110 TAAAGCTTAGCAAAAGCAAAGTCATTCTGGTTGCTGCTTGTTTGCTTTTG 159
||||||||||||||||||.|...||||||.||||||||.|..|||||.|.
BL00531___yab 149 TAAAGCTTAGCAAAAGCAGATGGATTCTGATTGCTGCTGGACTGCTTGTC 198
BSNT_00075___ 160 GCAGGAAGCGGGACTGCGTACGCGGCTCATGAGCTGACGAAACAATCAGT 209
|||||.|||||.|||||.||||..||.||||||||..|.|||||...|||
BL00531___yab 199 GCAGGGAGCGGAACTGCTTACGGAGCACATGAGCTCGCTAAACAGCAAGT 248
BSNT_00075___ 210 CTCAGTTTCTATCAATGGCAAAAAGAAACATATACGCACACATGCAAATA 259
|.|..||||.||.||.||.||||||.|..||.|.|||||..||||.||.|
BL00531___yab 249 CACCATTTCGATAAACGGGAAAAAGCAGGATGTTCGCACGAATGCTAAAA 298
BSNT_00075___ 260 CAGTCGGTGATCTTTTGGAGACGCTTGATATAAAGACA-AGAGACGA--A 306
|.||.|||||.||..| ||.|.|||| ||||| .||||||| |
BL00531___yab 299 CCGTAGGTGAACTGCT-GAAAAGCTT-------AGACATCGAGACGAGGA 340
BSNT_00075___ 307 GACAAGATCACA-----CCTGCTAAACAGACAAAGATAACAGCAGACATG 351
.|.||||||||| ||.|||.||.|.|||||..||||.||..|||||
BL00531___yab 341 AAGAAGATCACATCTCTCCCGCTGAAGATACAAAATTAACGGCGAACATG 390
BSNT_00075___ 352 GACGTTGTGTATGAGGCTGCAAAACCTGTGAAGCTTACAATAAACGGGGA 401
.|.||||..||||..||.|||||||||||..|..|.||..|..||||..|
BL00531___yab 391 AATGTTGAATATGTTGCCGCAAAACCTGTTCATTTCACGGTCGACGGACA 440
BSNT_00075___ 402 AGAAAAGACGTTATGGTCAACAGCAAAAACGGTCGGTGCATTACTGGACG 451
.||||||....|.|||.|||||||....||.|||||...|.|.|||.|.|
BL00531___yab 441 GGAAAAGGAAATCTGGACAACAGCGGGTACAGTCGGCAAACTTCTGAAAG 490
BSNT_00075___ 452 AACAAGATGTTGATGTGAAAGAACAAGATCAAATTGATCCCGCAATAGAT 501
|...|.||.|.||..||...|||||.|||||||||||.|||.||.|.|||
BL00531___yab 491 ACTTAAATTTAGAGTTGGCGGAACACGATCAAATTGACCCCTCAGTTGAT 540
BSNT_00075___ 502 ACGGATATTTCGAAAGACATGAAG----ATTAACATAGAGCCCGCATTTC 547
|..||.||..|||||||.|||||| .||..||.|| .||.|||.
BL00531___yab 541 AAAGAAATAACGAAAGATATGAAGCTGACTTTGCAAAG----GGCTTTTA 586
BSNT_00075___ 548 AGGTTACTGTGAATGATGCAGGGAAACAAAAGAAGA--TCTGGACGACTT 595
|.||.||.||.||.|||||.||.|||.|.| |||| |.||||||||||
BL00531___yab 587 AAGTAACCGTAAAGGATGCCGGTAAAGATA--AAGACCTATGGACGACTT 634
BSNT_00075___ 596 CGACTACGGTCGCTGACTTTTTAAAACAGCAAAAGATGAACATAAAAGAC 645
||||||||||||||||||||||||||||.||.|||||.|.||||||||.|
BL00531___yab 635 CGACTACGGTCGCTGACTTTTTAAAACATCATAAGATCAGCATAAAAGGC 684
BSNT_00075___ 646 GAAGATAAAATCAAGCCTGCGTTAGATGCAAAGCTGACGAAAGGAAAGGC 695
||.|||.||.|.|||||||||.|.|||..||||||||||||||...||||
BL00531___yab 685 GATGATGAAGTTAAGCCTGCGCTTGATAAAAAGCTGACGAAAGATCAGGC 734
BSNT_00075___ 696 TGATATTACAATTACTCGTATCGAAAAGGTCACCGATGTAGTTGAAGAGA 745
||| |.|| ||||||||||||.||||.||||||||||||||.|||||||
BL00531___yab 735 -GAT-TCAC-ATTACTCGTATCAAAAAAGTCACCGATGTAGTGGAAGAGA 781
BSNT_00075___ 746 AGATTGCGTTCGATGT---GAAAAAGCAAGAAGACGCTTCTCTTGAAAAA 792
|.||..|.||.||.|| ||||| ||||.||||.|||.||||||||.
BL00531___yab 782 ACATCCCTTTTGAAGTCCGGAAAA---AAGAGGACGATTCACTTGAAAAG 828
BSNT_00075___ 793 GGGAAAGAAAAGGTCGTCCAAAAAGGAAAAGAAGGCAAGCTAAAAAAACA 842
|||||||||||.||.||.||..|.||.|||.|.||||||||.|||||.||
BL00531___yab 829 GGGAAAGAAAAAGTTGTACAGGACGGTAAACATGGCAAGCTTAAAAAGCA 878
BSNT_00075___ 843 TTTCGAAGTCGTTAAAGAAAACGGTAAAGAAGTGTCCAGAGAGCTTGTAA 892
.|..|..||.||||...|||||||.||.|||||.||||||||.||..|.|
BL00531___yab 879 CTATGCCGTTGTTATGAAAAACGGCAAGGAAGTTTCCAGAGAACTGATTA 928
BSNT_00075___ 893 AAGAAGAAACAGCTGAACAAAGCAAAGATAAAGTGATTGCTGTCGGCACA 942
||||.|||||.||.|...|||||||||..|||.|.||.||||||||.|||
BL00531___yab 929 AAGAGGAAACGGCAGCCGAAAGCAAAGCCAAAATCATCGCTGTCGGTACA 978
BSNT_00075___ 943 AAGCAA--AGCAGT--CCAAAATTTGAAACGGTCAGTGCTTCAGGTGATT 988
|||||| .||||| |.||| |||||.|| ||
BL00531___yab 979 AAGCAAGCCGCAGTGGCTAAA----------GTCAGCGC-------GA-- 1009
BSNT_00075___ 989 CAAAAACAGTTGTGTCCCGCAGCAATGAATCAACAGGCAAAGTCATGA-- 1036
.|||.||.|||.|.|||.||||..|||| |||| ||
BL00531___yab 1010 ---------ATGTATCGCGCGGAAATCAATCCTCAGG-AAAG----GAAT 1045
BSNT_00075___ 1037 ---CTGTATCATCTACGGCTTATACGGCAAGCTGCAGCGGTTGTTCAGGA 1083
.||||||.|||||.||||||||.||||||||||.|||.||.|||||.
BL00531___yab 1046 TTTATGTATCCTCTACAGCTTATACAGCAAGCTGCAACGGATGCTCAGGC 1095
BSNT_00075___ 1084 CATACAGCGACAGGCGTCAATTTAAAAAATAATCCGAATGCCAAAGTCAT 1133
||.||.|||||.|||||.|||||.|||||||||||....||.|||||.||
BL00531___yab 1096 CACACTGCGACCGGCGTTAATTTGAAAAATAATCCCGGCGCTAAAGTGAT 1145
BSNT_00075___ 1134 CGCTGTGGATCCAAATGTCATTCCGCTAGGCTCCAAAGTCCACGTGGAAG 1183
||||||.|||||.|..||.||||||||.||.||||||||.||.||.||||
BL00531___yab 1146 CGCTGTCGATCCGAGCGTTATTCCGCTGGGTTCCAAAGTACATGTAGAAG 1195
BSNT_00075___ 1184 GCTATGGATATGCCATTGCTGCAGATACCGGTTCAGCGATTAAAGG--GA 1231
|.|||||.|||||..||||.||.|||||.||.|||||.||.||||| ||
BL00531___yab 1196 GATATGGCTATGCGGTTGCGGCCGATACAGGCTCAGCCATCAAAGGCCGA 1245
BSNT_00075___ 1232 ACAAGATAGACGTCTT-TTTCCCAGAGAAATCATCGGCGTACCGATGGGG 1280
||.||.||.||.|| |||||.| |.||.||..|.||.|||||.|||||
BL00531___yab 1246 --AAAATCGATGTATTCTTTCCGA-ATAAGTCTACAGCTTACCGCTGGGG 1292
BSNT_00075___ 1281 AAATAAAACAGTCAAAATTAAAATCTTAAATTAG 1314
|||.||||.|||.|||||.||..|.||.||.||.
BL00531___yab 1293 AAACAAAAGAGTTAAAATCAAGGTGTTGAACTAA 1326
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