Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00078 and BL00529
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:44
# Commandline: needle
# -asequence dna-align/BSNT_00078___ksgA.1.5803.seq
# -bsequence dna-align/BL00529___ksgA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00078___ksgA-BL00529___ksgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00078___ksgA-BL00529___ksgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00078___ksgA
# 2: BL00529___ksgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity: 679/885 (76.7%)
# Similarity: 679/885 (76.7%)
# Gaps: 12/885 ( 1.4%)
# Score: 2518.0
#
#
#=======================================
BSNT_00078___ 1 ATGAATAAAGATATTGCGACACCGATTAGAACGAAAGAGATACTGAAGAA 50
||||||||||||||.||.||.||.|||||.||.||.||.||.||.||.||
BL00529___ksg 1 ATGAATAAAGATATCGCCACCCCAATTAGGACTAAGGAAATTCTCAATAA 50
BSNT_00078___ 51 ATACGGTTTTTCTTTTAAAAAGAGCTTAGGACAGAATTTCTTAATTGATA 100
||||||.|||||.||.|||||.|||.|.||.|||||.|||||.|||||.|
BL00529___ksg 51 ATACGGATTTTCATTCAAAAAAAGCCTGGGGCAGAACTTCTTGATTGACA 100
BSNT_00078___ 101 CGAACATTTTAAACAGAATTGTTGATCACGCGGAAGTGACGGAGAAAACA 150
|||||||.||..||||||||||.||.||.||.|..|||||||||...|||
BL00529___ksg 101 CGAACATATTGGACAGAATTGTCGACCATGCCGGTGTGACGGAGCGTACA 150
BSNT_00078___ 151 GGTGTCATTGAAATCGGCCCGGGAATCGGGGCTTTAACCGAACAGCTTGC 200
||.||.|||||||||||.|||||.||||||||.||.|||||.|||||.||
BL00529___ksg 151 GGCGTGATTGAAATCGGTCCGGGGATCGGGGCATTGACCGAGCAGCTGGC 200
BSNT_00078___ 201 CAAGCGGGCGAAAAAGGTCGTGGCATTTGAGATTGACCAGCGATTATTGC 250
.|||||.|||||.||.||...|||.||||||||.|||||.||..|..|||
BL00529___ksg 201 AAAGCGTGCGAAGAAAGTAACGGCCTTTGAGATCGACCAACGGCTTCTGC 250
BSNT_00078___ 251 CGATTCT-GAAGGATACACTGTCACCTTACGAAAATGTCACTGTCATTCA 299
|||||.| ||| |||||.||.||.||.||.||.|||||.|||||||||||
BL00529___ksg 251 CGATTTTAGAA-GATACGCTTTCTCCGTATGATAATGTGACTGTCATTCA 299
BSNT_00078___ 300 TCAGGACGTGTTAAAGGCTGATGTCAAATCAGTCATTGAAGAACAATTTC 349
.|||||.||..|.|||||.||||||..|.|.||.||.||.|||||.||||
BL00529___ksg 300 CCAGGATGTCCTGAAGGCCGATGTCCGAGCGGTAATGGACGAACAGTTTC 349
BSNT_00078___ 350 AAGATTGTGATGAGATCATGGTAGTTGCCAACCTTCCTTATTACGTAACA 399
||||.||.||||||.|.|||||.||.||||||||.||.||||||||.||.
BL00529___ksg 350 AAGACTGCGATGAGGTGATGGTTGTCGCCAACCTCCCGTATTACGTCACG 399
BSNT_00078___ 400 ACACCGATTATCATGAAACTGCTTGAAGAACATCTTCCGCTGAAAGGGAT 449
||.|||||.||||||||.||..|.||||||.||||.|||||||||||.||
BL00529___ksg 400 ACTCCGATCATCATGAAGCTTTTAGAAGAAAATCTGCCGCTGAAAGGAAT 449
BSNT_00078___ 450 TGTGGTTATGCTGCAAAAAGAAGTGGCTGAGCGCATGGCGGCTGATCCTT 499
.||.||.|||||.||||||||.|||||.||.||.|||||.||..|.||||
BL00529___ksg 450 CGTCGTCATGCTTCAAAAAGAGGTGGCGGACCGAATGGCTGCAAAACCTT 499
BSNT_00078___ 500 CATCTAAGGAATACGGCTCGCTTTCAATCGCGGTGCAGTTTTATACAGAA 549
|.||.|||||||||||.||.|||||.||||||||||||||||||||.||.
BL00529___ksg 500 CTTCAAAGGAATACGGGTCCCTTTCCATCGCGGTGCAGTTTTATACGGAG 549
BSNT_00078___ 550 GCCAAAACGGTGATGATCGTCCCGAAAACCGTATTTGTTCCTCAGCCTAA 599
|||||||||||.||||..||.||.||.|||||||||||.|||||||||||
BL00529___ksg 550 GCCAAAACGGTCATGAATGTACCAAAGACCGTATTTGTCCCTCAGCCTAA 599
BSNT_00078___ 600 TGTCGATTCCGCAGTCATTCGTCTGATTCTCCGAG--ACGGCCCGGCAGT 647
.||.||||||||.|||||..|.|||| |.|.||| |.|..|||||.||
BL00529___ksg 600 CGTAGATTCCGCGGTCATCAGGCTGA--CGCTGAGGAAAGAGCCGGCTGT 647
BSNT_00078___ 648 GGACGTGGAAAACGAATCCTTTTTCTTTCAGCTCATCAAGGCAAGCTTTG 697
||.|||..||.|.|...|||||||||||||..||.|.||.||||||||||
BL00529___ksg 648 GGCCGTTCAAGATGCTGCCTTTTTCTTTCAAGTCGTAAAAGCAAGCTTTG 697
BSNT_00078___ 698 CACAGCGCCGTAAAACGCTGCTCAATAACTTAGTTAACAATCTGCCTGAA 747
|||||||.||.||||||||..||||.|||.|.||.||||||||||| |||
BL00529___ksg 698 CACAGCGTCGAAAAACGCTTTTCAACAACCTCGTCAACAATCTGCC-GAA 746
BSNT_00078___ 748 -GGAAAAGCACAA-AAATCAACGATTGAACAAGTGCTCGAAGAAACAAAT 795
||.|||| |.|| |||||||..||||||..||.|||..|.||..||.||
BL00529___ksg 747 TGGCAAAG-AGAATAAATCAAAAATTGAAAGAGCGCTTCAGGATTCACAT 795
BSNT_00078___ 796 ATTGACGGTAAGCGCCGAGGTGAATCCCTGTCTATTGAGGAATTCGCAGC 845
||.|||||.||.||.||.||.||.||.||....|||||.||.|||||.|.
BL00529___ksg 796 ATCGACGGAAAACGACGCGGAGAGTCGCTTAGCATTGAAGAGTTCGCCGT 845
BSNT_00078___ 846 GCTGTCTAACGGATTGTATA-AAGCCCTTTTCTAA 879
..|.|||.||.|.||| |.| |||.||||.|.|||
BL00529___ksg 846 CTTATCTGACCGCTTG-AGAGAAGTCCTTCTTTAA 879
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