Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00079 and BL00528
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:44
# Commandline: needle
# -asequence dna-align/BSNT_00079___yabG.1.5803.seq
# -bsequence dna-align/BL00528___yabG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00079___yabG-BL00528___yabG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00079___yabG-BL00528___yabG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00079___yabG
# 2: BL00528___yabG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 903
# Identity: 666/903 (73.8%)
# Similarity: 666/903 (73.8%)
# Gaps: 51/903 ( 5.6%)
# Score: 2370.5
#
#
#=======================================
BSNT_00079___ 1 GTGCAATTTCAAATAGGGGATATGGTAGCCAGAAAATCCTATC--AGATG 48
.||||||||.|||||||.||||||||.|.|||||||||.|||| |||
BL00528___yab 1 ATGCAATTTAAAATAGGCGATATGGTCGTCAGAAAATCTTATCGAAGA-- 48
BSNT_00079___ 49 GATGTTTTGTTTCGAATTATAGGAATAGAGCAAACAAGCAAA-GGAAATT 97
|||.||||.||||||||||||.||||.||.|||.| .||||| |||.|..
BL00528___yab 49 GATATTTTATTTCGAATTATAAGAATTGATCAATC-GGCAAATGGAGAAC 97
BSNT_00079___ 98 CAATTGCCATTTTGCATGGAGATGAAGTCAGGCTGATTGCTGATTCGGAT 147
|..|.|||.|||||||.||||||||.|||||..|.||.|||||..||.||
BL00528___yab 98 CTGTAGCCGTTTTGCACGGAGATGAGGTCAGATTAATCGCTGACGCGCAT 147
BSNT_00079___ 148 TTTTCTGATCTGG----TGGCAGTGAAAAAGGATGA---GCAGATGATGC 190
||....|||||.| ||.|.|.| |||.||| ||||||||
BL00528___yab 148 TTGGGGGATCTTGAGATTGTCCGCG----AGGCTGAGTGGCAGATGA--- 190
BSNT_00079___ 191 GGAAA-----AAGAAAGATGAGAGCAGAATGAATGAGTCGCTCGAATTGC 235
|||| ||||| ||.|..||||||||.||.||.|||||..|.|
BL00528___yab 191 -GAAAGCGGGAAGAA----GAAACGAGAATGAAGGAATCCCTCGATCTTC 235
BSNT_00079___ 236 TCCGCCAAGATTATAAGCTGC-TCA-GAGAAAAGCAGGAGTACTATGCGA 283
|||||||.|||||.||.||.| ||| ||.||| ||.||||||...||.|
BL00528___yab 236 TCCGCCAGGATTACAAACTCCTTCACGATAAA--CATGAGTACCGCGCCA 283
BSNT_00079___ 284 CAAGCCAATATCAGCATCAGGAGCATTATTTCCATATGCCGGGCAAAGTG 333
|||.|||||||.|..||||..||||.||.||.||||||||.||.|.|||.
BL00528___yab 284 CAAACCAATATAACAATCAACAGCAGTACTTTCATATGCCCGGAAGAGTC 333
BSNT_00079___ 334 CTTCATCTGGATGGTGA--CGAAGCATATCTGAAAAAATGCCTGAATGTC 381
||||||.|.||.||.|| || ||.|||.|||||||.||.|||....||
BL00528___yab 334 CTTCATTTAGACGGGGATTCG--GCTTATTTGAAAAAGTGTCTGGCGCTC 381
BSNT_00079___ 382 TATAAAAAAATTGGAGTGCCGGTCTATGGCATCCATTGCCATGAAAAGAA 431
||..||||.||.||.||.||.||.||.|||||.||||||.||||||||||
BL00528___yab 382 TACGAAAAGATCGGGGTTCCTGTATACGGCATTCATTGCTATGAAAAGAA 431
BSNT_00079___ 432 AATGTC-TGCTTCTATTGAAGAATTGCTCGACAAATATCGACCTGATATC 480
|||||| |...|| ||.||.|||.||.||||..||||.||.||.|||.|.
BL00528___yab 432 AATGTCATCAGTC-ATCGAGGAACTGATCGATGAATACCGCCCGGATCTT 480
BSNT_00079___ 481 CTGGTGATCACAGGGCATGATGCGTATTCGAAGCAAAAGGGCGGCATTGA 530
||.||.||.||.||.||.|||||.|||||.|||||.|||||||..|||.|
BL00528___yab 481 CTCGTCATTACCGGACACGATGCCTATTCTAAGCAGAAGGGCGATATTAA 530
BSNT_00079___ 531 TGATTTGAATGCGTACAGACATTCTAAGCACTTTGTTGAAACTGTTCAAA 580
..||.||.||||.|||||.|||||.||..|.|||.|.|||||.|||||||
BL00528___yab 531 CAATCTGGATGCCTACAGGCATTCAAAAGATTTTATCGAAACCGTTCAAA 580
BSNT_00079___ 581 CAGCCCGAAAAAAGATCCCTCA-CTTAGATCAGCTTGTTATTTTTGCGGG 629
.|||..|||.|||.||.||.|| ||| ||||||||.||.||||||||.||
BL00528___yab 581 AAGCGAGAAGAAAAATTCCCCATCTT-GATCAGCTCGTCATTTTTGCCGG 629
BSNT_00079___ 630 GGCCTGCCAATCCCATTTTGAATCACTCATCAGAGCGGGTGCGAATTTTG 679
.||.|||||.|||||||||||||||||.||||||||.|||||.|||||.|
BL00528___yab 630 CGCATGCCAGTCCCATTTTGAATCACTGATCAGAGCCGGTGCAAATTTCG 679
BSNT_00079___ 680 CAAGTTCACCGTCAAGAGTCAATATTCATGCGCTTGATCCGGTATATATC 729
||||.||.|||||.||||||||.||.|||||||||||||||||.|||||.
BL00528___yab 680 CAAGCTCTCCGTCCAGAGTCAACATCCATGCGCTTGATCCGGTCTATATA 729
BSNT_00079___ 730 GTCGCGAAGATCAGCTTTACGCCGTTTATGGAACGGATTAATGTATGGGA 779
|||||.||.||||||||.||.|||||||||||.||.|||||.||.|||||
BL00528___yab 730 GTCGCAAAAATCAGCTTCACTCCGTTTATGGACCGCATTAACGTCTGGGA 779
BSNT_00079___ 780 AGTGCTCCGTAATACGCTGACAAGAGAGAAAGGGCTTGGAGGTATTGAAA 829
|||||||.|.|||||..||||.|||||.||.|||||.|||||||||||.|
BL00528___yab 780 AGTGCTCAGAAATACCTTGACGAGAGAAAAGGGGCTCGGAGGTATTGAGA 829
BSNT_00079___ 830 CAAGAGGAGTTCTGAGAATTGGTATGCCTTATAAGTC---------CAAT 870
|..|.||.||..||.|.|||||.|||||.|||||..| |.||
BL00528___yab 830 CGCGGGGCGTATTGCGTATTGGAATGCCATATAAAACAAAAGCAAACGAT 879
BSNT_00079___ 871 TAA 873
|||
BL00528___yab 880 TAA 882
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