Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00081 and BL00526
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:44
# Commandline: needle
# -asequence dna-align/BSNT_00081.1.5803.seq
# -bsequence dna-align/BL00526___sspF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00081-BL00526___sspF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00081-BL00526___sspF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00081
# 2: BL00526___sspF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 186
# Identity: 129/186 (69.4%)
# Similarity: 129/186 (69.4%)
# Gaps: 21/186 (11.3%)
# Score: 501.0
#
#
#=======================================
BSNT_00081 1 ---------------------ATGTCAGATGAGTTTAAATATGAGCTGGC 29
||||||||.||.||.|||.||||..||||
BL00526___ssp 1 ATGGGCAGACGTCGAAGCATCATGTCAGAGGAATTCAAAAATGAATTGGC 50
BSNT_00081 30 TAAAGACCTTGGTTTTTATGACACAGTAAAAAATGGCGGCTGGGGCGAAA 79
||||||.|||||.|||||.||.||.|||||.|..|..||||||||||.||
BL00526___ssp 51 TAAAGATCTTGGATTTTACGATACGGTAAAGACCGAGGGCTGGGGCGGAA 100
BSNT_00081 80 TTCGGGCTCGCGATGCCGGTAACATGGTGAAGCGTGCTATTGAAATCGCC 129
|||||||..|.||.|||||.|||||||||||..|.||.||.|||.|.|||
BL00526___ssp 101 TTCGGGCCAGAGACGCCGGCAACATGGTGAAAAGGGCCATCGAATTAGCC 150
BSNT_00081 130 GAACAGCAAATGGCTCAGAATCAGAATAACCGATAA 165
||||||||.||||||||.||||||.|.||.|..|||
BL00526___ssp 151 GAACAGCATATGGCTCAAAATCAGCAAAATCATTAA 186
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