Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00083 and BL00523

See Amino acid alignment / Visit BSNT_00083 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:44
# Commandline: needle
#    -asequence dna-align/BSNT_00083___purR.1.5803.seq
#    -bsequence dna-align/BL00523___purR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00083___purR-BL00523___purR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00083___purR-BL00523___purR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00083___purR
# 2: BL00523___purR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     627/873 (71.8%)
# Similarity:   627/873 (71.8%)
# Gaps:          54/873 ( 6.2%)
# Score: 2224.5
# 
#
#=======================================

BSNT_00083___      1 ATGAAGTTTCGTCGCAGCGGCAGATTGGTGGACTTAACAAATTATTTGTT     50
                     ||||||||||||||.|||||||||||||||||..|.||||||||||||||
BL00523___pur      1 ATGAAGTTTCGTCGAAGCGGCAGATTGGTGGATCTGACAAATTATTTGTT     50

BSNT_00083___     51 AACCCATCCGCACGAGTTAATACCGCTAACCTTTTTCTCTGAGCGGTATG    100
                     .|||||||||||.|..|||.|.||..|||||||.||.||.||.||||||.
BL00523___pur     51 GACCCATCCGCATGTCTTAGTGCCATTAACCTTCTTTTCAGAACGGTATC    100

BSNT_00083___    101 AATCTGCAAAATCATCGATCAGTGAAGATTTAACAATTATTAAACAAACC    150
                     |||||||.||||||||.||.||||||||||||||.||.|||||.||.|||
BL00523___pur    101 AATCTGCTAAATCATCCATTAGTGAAGATTTAACCATCATTAAGCAGACC    150

BSNT_00083___    151 TTTGAACAGCAGGGGATTGGTACTTTGCTT---ACTGTTCCCGGAGCTGC    197
                     ||.||.||||||||.||.||.||   ||||   ||.||.||.|||||.||
BL00523___pur    151 TTCGAGCAGCAGGGAATCGGAAC---GCTTCAGACCGTGCCGGGAGCAGC    197

BSNT_00083___    198 CGGAGGCGTTAAATATATTCCGAAAATGAAGCAGGCTGAAGCTGAAGAGT    247
                     |||.|||||||||||.|||||.||..|.||.|..|.||||||.||.||.|
BL00523___pur    198 CGGCGGCGTTAAATACATTCCAAAGGTAAAACGCGATGAAGCGGAGGAAT    247

BSNT_00083___    248 TTGTGCAGACACTTGGACAGTCGCTGGCAAATC----CTGAGCGTATCCT    293
                     ||||..||.|.||.||..||||..||    |||    |.||.||.||..|
BL00523___pur    248 TTGTAAAGTCGCTCGGTGAGTCATTG----ATCGATTCGGAACGGATATT    293

BSNT_00083___    294 TCCGGGCGGTTATGTATATTTAACGGATATCTTAGGAAAGCCATCTGTAC    343
                     .||.|||||.|||.|.||||||||.||||||.|.||||||||.||||||.
BL00523___pur    294 GCCCGGCGGATATTTGTATTTAACCGATATCCTTGGAAAGCCCTCTGTAT    343

BSNT_00083___    344 TCTCCAAGGTAGGGAAGCTGTTTGCTTCCGTGTTTGCAGAGCGCGAAATT    393
                     |..|.||||..||.||..|.||||||||||..|||.||||..|.||.||.
BL00523___pur    344 TAACGAAGGCCGGCAAAATTTTTGCTTCCGCTTTTTCAGACAGGGAGATC    393

BSNT_00083___    394 GATGTTGTCATGACCGTTGCCACGAAAGGCATCCCTCTTGCGTATGCAGC    443
                     |||||.||.|||||.||.||.||.||||||||.|||.|.||.|||||.|.
BL00523___pur    394 GATGTCGTGATGACGGTGGCGACAAAAGGCATTCCTTTGGCATATGCGGT    443

BSNT_00083___    444 TGCAAGTTA-TTTGAATGTACCTGTTGTGATCGTTCGTAAAGACAATAAG    492
                     .||.||.|| .||| ||||.||....|||.||||..|.||||||||||||
BL00523___pur    444 AGCCAGCTACCTTG-ATGTGCCGACAGTGGTCGTCAGAAAAGACAATAAG    492

BSNT_00083___    493 GTAACAGAGGGCTCCACAGTCAGCATTAATTACGTTTCAGGCTCCTCAAA    542
                     |||||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||
BL00523___pur    493 GTAACTGAAGGGTCAACGGTCAGCATCAACTATGTGTCCGGATCATCCAA    542

BSNT_00083___    543 CCGCATTCAAACAATGTCACTTGCGAAAAGAAGCATGAAAACGGGGTCAA    592
                     |||||||||.||.|||||.|||||.|||.|||||.||.|.|||||.||..
BL00523___pur    543 CCGCATTCAGACGATGTCTCTTGCAAAACGAAGCTTGCAGACGGGCTCGC    592

BSNT_00083___    593 ACGTACTCATTATTGATGACTTTATGAAAGCAGGCGGCACCATTAATGGT    642
                     ||||..|.||.||.||.||||||||||||||.||.||.||.||.||.||.
BL00523___pur    593 ACGTTTTGATCATAGACGACTTTATGAAAGCGGGAGGAACGATCAACGGC    642

BSNT_00083___    643 ATGATTAATCTGTTGGATGAGTTTAACGCAAATGTGGCGGGAATCGGCG-    691
                     |||||.|||||..|.|||||.||.||.||..||||.|||||.|||||.| 
BL00523___pur    643 ATGATCAATCTTCTCGATGAATTCAATGCCCATGTAGCGGGCATCGGTGT    692

BSNT_00083___    692 TCTTAGTTGAAGCCGAAGGAGTAGATGAACGTCTTGTTGACGAATATATG    741
                     |||| ||.|||||..|.|||||..|.||.||.||.||.||.||.||||||
BL00523___pur    693 TCTT-GTGGAAGCTCAGGGAGTCAAGGAGCGGCTGGTCGATGAGTATATG    741

BSNT_00083___    742 TCACTTCTTACTCTTTC--AACCATCAACATGAAAGAGAAGTCCA----T    785
                     ||.|||.|.||||||||  ||  |||.|.|||||.||.||    |    |
BL00523___pur    742 TCCCTTTTGACTCTTTCTGAA--ATCGATATGAAGGAAAA----AAAGGT    785

BSNT_00083___    786 TGAAATTCAGAATGGCAATTTTCTGCGTTTTCTTAAAGACAATCTTTTAA    835
                     .|||||.||.||.||.|||||||.|||||||.||..|||.|||       
BL00523___pur    786 GGAAATACAAAACGGAAATTTTCAGCGTTTTTTTGCAGAAAAT-------    828

BSNT_00083___    836 AGAATGGAGAGACAGAATCATGA    858
                      ||||.|                
BL00523___pur    829 -GAATAG----------------    834


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00083 and BL00523

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
