Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00085 and BL00521

See Amino acid alignment / Visit BSNT_00085 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:44
# Commandline: needle
#    -asequence dna-align/BSNT_00085.1.5803.seq
#    -bsequence dna-align/BL00521___spoVG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00085-BL00521___spoVG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00085-BL00521___spoVG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00085
# 2: BL00521___spoVG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     215/294 (73.1%)
# Similarity:   215/294 (73.1%)
# Gaps:          48/294 (16.3%)
# Score: 951.0
# 
#
#=======================================

BSNT_00085         1 ------------------------------------------------AT      2
                                                                     ||
BL00521___spo      1 GTGGAAGTTACCGACGTAAGATTACGCCGCGTGAATACCGATGGTCGCAT     50

BSNT_00085         3 GAGAGCGATTGCATCCATCACGCTGGATCACGAATTTGTTGTACATGATA     52
                     |||||||||||||||||||||||||||||||||||||||.||.|||||||
BL00521___spo     51 GAGAGCGATTGCATCCATCACGCTGGATCACGAATTTGTAGTGCATGATA    100

BSNT_00085        53 TTCGTGTGATTGATGGAAACAATGGTCTTTTCGTTGCGATGCCGAGTAAA    102
                     |||||||.|||||||||||||||||||||||||||||||||||.|||||.
BL00521___spo    101 TTCGTGTAATTGATGGAAACAATGGTCTTTTCGTTGCGATGCCAAGTAAG    150

BSNT_00085       103 CGCACCCCTGATGGAGAGTTCCGCGATATTGCTCATCCTATTAATTCAAG    152
                     ||.||.|||||||||||.||.||.|||||.||||||||.||.||.|||||
BL00521___spo    151 CGTACACCTGATGGAGAATTTCGTGATATCGCTCATCCAATCAACTCAAG    200

BSNT_00085       153 CACGCGAGGAAAGATTCAAGATGCCGTGTTAAATGAGTATCATCGTCTGG    202
                     |||.||.|||||.|||||.||.||.|||||||||||.|||||||||.|||
BL00521___spo    201 CACCCGCGGAAAAATTCAGGACGCGGTGTTAAATGAATATCATCGTTTGG    250

BSNT_00085       203 GTGACACTGAAGCATTAGAATTCGAAGAAGCTGGAGCTTCTTAA    246
                     |||||..|||.|.|.||||||..||||||..|||||||||||||
BL00521___spo    251 GTGACGTTGAGGAAATAGAATATGAAGAAATTGGAGCTTCTTAA    294


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