Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00095 and BL00514

See Amino acid alignment / Visit BSNT_00095 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence dna-align/BSNT_00095___spoVT.1.5803.seq
#    -bsequence dna-align/BL00514___spoVT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00095___spoVT-BL00514___spoVT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00095___spoVT-BL00514___spoVT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00095___spoVT
# 2: BL00514___spoVT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 537
# Identity:     425/537 (79.1%)
# Similarity:   425/537 (79.1%)
# Gaps:           0/537 ( 0.0%)
# Score: 1677.0
# 
#
#=======================================

BSNT_00095___      1 ATGAAAGCAACCGGTATCGTACGTCGTATTGATGACTTAGGCCGGGTCGT     50
                     |||||||||||.||||||||||||||.||||||||.||||||||||||||
BL00514___spo      1 ATGAAAGCAACTGGTATCGTACGTCGAATTGATGATTTAGGCCGGGTCGT     50

BSNT_00095___     51 GATTCCTAAAGAAATTCGAAGAACTCTGAGAATCAGGGAAGGCGATCCGC    100
                     |||.||.||.|||||.||.||||||.||.|.||..|.|||||.||.||..
BL00514___spo     51 GATCCCGAAGGAAATCCGCAGAACTTTGCGCATTCGTGAAGGAGACCCTT    100

BSNT_00095___    101 TTGAGATTTTTGTAGATCGTGACGGAGAAGTGATTTTGAAAAAGTATTCA    150
                     |.||.||.|||||.||.||.||.||.||.||.|||||.|||||||||||.
BL00514___spo    101 TGGAAATATTTGTGGACCGGGATGGGGAGGTTATTTTAAAAAAGTATTCT    150

BSNT_00095___    151 CCGATCAGTGAGCTTGGAGACTTTGCAAAGGAGTATGCAGACGCGCTTTA    200
                     ||||||||.|||||.||.|||||||||||.|||||||||||.||||||||
BL00514___spo    151 CCGATCAGCGAGCTCGGCGACTTTGCAAAAGAGTATGCAGATGCGCTTTA    200

BSNT_00095___    201 CGACAGCCTCGGCCATTCAGTGCTGATTTGTGATCGTGATGTATATATTG    250
                     .||||||.|.||||||||.|||||||||||.||.||.|||||.|||||.|
BL00514___spo    201 TGACAGCATGGGCCATTCCGTGCTGATTTGCGACCGGGATGTGTATATCG    250

BSNT_00095___    251 CCGTGTCCGGCAGCTCCAAAAAAGATTACTTAAACAAGTCAATCAGTGAA    300
                     |.||.|||||..|.||.||||||||.||.||||||||.||.|||||.||.
BL00514___spo    251 CAGTATCCGGGGGGTCTAAAAAAGACTATTTAAACAAATCGATCAGCGAC    300

BSNT_00095___    301 ATGCTGGAAAGAACAATGGATCAGCGCAGCTCCGTGCTTGAGAGTGATGC    350
                     |||.|.||||...|.|||||||||||||..||.||..|.||..|.||.||
BL00514___spo    301 ATGGTCGAAAAGGCGATGGATCAGCGCACTTCTGTTTTGGACGGAGACGC    350

BSNT_00095___    351 GAAATCAGTACAGCTTGTGAATGGAATTGATGAGGACATGAATTCTTATA    400
                     |||..|..|.||||||.|..||||.|||||.||.||..|...||||||||
BL00514___spo    351 GAAGACGATTCAGCTTATTGATGGTATTGACGAAGAGGTTGCTTCTTATA    400

BSNT_00095___    401 CTGTCGGCCCAATTGTGGCGAACGGTGATCCGATAGGTGCTGTGGTGATC    450
                     |.||||||||.|||||.||.|||||.||.|||||.||.||.||.||.||.
BL00514___spo    401 CCGTCGGCCCGATTGTTGCAAACGGCGACCCGATCGGAGCGGTTGTCATT    450

BSNT_00095___    451 TTTTCAAAAGACCAGACAATGGGCGAAGTAGAGCATAAAGCCGTTGAAAC    500
                     |||||||||||||||.||||.||||||||.||.||||||||.||||||||
BL00514___spo    451 TTTTCAAAAGACCAGTCAATCGGCGAAGTGGAACATAAAGCGGTTGAAAC    500

BSNT_00095___    501 AGCAGCTGGATTTTTGGCTCGTCAAATGGAACAGTAG    537
                     .||.||.||.||||||||.||.|||||||||||.|||
BL00514___spo    501 TGCCGCCGGCTTTTTGGCCCGGCAAATGGAACAATAG    537


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