Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00097 and BL00512
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence dna-align/BSNT_00097___yabN.1.5803.seq
# -bsequence dna-align/BL00512___yabN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00097___yabN-BL00512___yabN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00097___yabN-BL00512___yabN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00097___yabN
# 2: BL00512___yabN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1517
# Identity: 1039/1517 (68.5%)
# Similarity: 1039/1517 (68.5%)
# Gaps: 94/1517 ( 6.2%)
# Score: 3300.0
#
#
#=======================================
BSNT_00097___ 1 ATGGCGGGTAAAATTACAGTCGTCGGACTTGGTGCCGGAGACATGGACCA 50
|||||.||||||||.||.||.|||||.|||||.||.||.||.|||.|.||
BL00512___yab 1 ATGGCCGGTAAAATCACGGTAGTCGGCCTTGGGGCAGGCGATATGAATCA 50
BSNT_00097___ 51 ATTGACAATTGGTATACACAAGCTGCTGACGAAGGCAGATACGCTGTATG 100
|||.||..|.|||.||.|.||.|.|||.||..|.||.||....||.||||
BL00512___yab 51 ATTAACCCTCGGTGTATATAAACGGCTCACACAAGCGGAGGTTCTTTATG 100
BSNT_00097___ 101 TCAGAACCAAGGATCATCCTTTAATTGAGGAGCTTGAAAAAGAAA---CG 147
||||.||.||.||.|||||.|||||.||.||.||..||||||||| ||
BL00512___yab 101 TCAGGACGAAAGACCATCCATTAATAGAAGACCTGAAAAAAGAAATAGCG 150
BSNT_00097___ 148 AAGAACATCCGTTACTTTGACGATATATATGAGAAACATGATCAGTTCGA 197
.|| ||.|.||..|||||.||..|.|||||.||.||||||||.|||||
BL00512___yab 151 GAG---ATTCATTTTTTTGATGAGGTCTATGAAAAGCATGATCAATTCGA 197
BSNT_00097___ 198 GGCGGTATATGAAGAAATTGCAGATATCCTCTTTGAAGCGGCGCGGCGTG 247
.|..||.||.||.||.||.|.|||....||.|||||.|.||||..||..|
BL00512___yab 198 AGATGTTTACGAGGAGATCGTAGAGCGGCTTTTTGAGGAGGCGAAGCAGG 247
BSNT_00097___ 248 AGGACGTGGTTTACGCTGTGCCGGGACACCCTTTTGTCGCAGAAAAAACA 297
.|||.|||.|.||.||.||.||.||.||.||.||.|||||.||||||||.
BL00512___yab 248 GGGATGTGCTCTATGCCGTTCCAGGCCATCCGTTCGTCGCTGAAAAAACG 297
BSNT_00097___ 298 GTTCAGC---TGC-TGACGGA-GCGGGAGG---AAAAGGAAAACGT--TC 337
||.|||| ||| ||| || |||.|.|| |..|||...|.|| ||
BL00512___yab 298 GTCCAGCTTTTGCTTGA--GAGGCGTGGGGCTCATCAGGCCGATGTCGTC 345
BSNT_00097___ 338 AAGTGAAAGTCGCGGGTGGACAAAGTTTCCTTGATGCCACATTCAATGCC 387
||||.|||.||.||.||.||..|||||||.||.||.|||||.
BL00512___yab 346 --------GTCGAGGGAGGCCACAGCTTTATTGATGCGACGTTAAATGCT 387
BSNT_00097___ 388 TTGCAAATTGACCCGATTGAAGGTTTTCAATTTGTGGATGCCGGCACATT 437
|||||.||.||.||||||||.||.|||||.|||||.|||||||.|...||
BL00512___yab 388 TTGCAGATCGATCCGATTGACGGGTTTCAGTTTGTCGATGCCGTCCGGTT 437
BSNT_00097___ 438 GTCCGCGGATGAGCTTGAGCTCAGACATCATCTGATCATATGTCAGGTTT 487
.||.||.||.||..|.||||||.|.||||||.||||.||.||.|||||.|
BL00512___yab 438 TTCAGCCGACGAAGTCGAGCTCCGTCATCATTTGATTATTTGCCAGGTAT 487
BSNT_00097___ 488 ACGACCAAATGACGGCTTCTGAAGTCAAGCTGACATTGATGGAGAAGCTG 537
|.||.||||||||||||||.||.|||||.|||||.||.|||||.|||||.
BL00512___yab 488 ATGATCAAATGACGGCTTCAGAGGTCAAACTGACGTTAATGGAAAAGCTT 537
BSNT_00097___ 538 CCTGATGATTATGAGGTCGTCATTGTGACTGCAGCAGGCAGC--CGTGGC 585
||||||||.|||||.|||||||||||.||.||.||.||.||| |.||
BL00512___yab 538 CCTGATGACTATGAAGTCGTCATTGTAACAGCGGCCGGAAGCAGCATG-- 585
BSNT_00097___ 586 GAGGAGATCAAGACAGTGCCATTATTT--GAGCTGGACCGCAATGTCGCC 633
.|.||.||...||||||||| |.||| ||..|||||.|.|..||.|.|
BL00512___yab 586 CAAGACATTCGGACAGTGCC--TCTTTACGAATTGGACAGAAGCGTGGGC 633
BSNT_00097___ 634 TTGAACAACTTAACAAGTGTGTATATTCCGCCGATTAAAGAAGAGAAGCT 683
.|.||.||.|||||.||.||.|||.|.|||||..|.|||||.||..||.|
BL00512___yab 634 ATCAATAATTTAACGAGCGTCTATGTGCCGCCTGTCAAAGACGAAGAGAT 683
BSNT_00097___ 684 GCTTTATCACGAATTCTCCACGTTCCGAAGCATCATCAGAGAGCTTCGCG 733
.||..|.||.|||||.||.|.||||||.||..||||||||.||||.||||
BL00512___yab 684 TCTCCACCAGGAATTTTCGATGTTCCGCAGTGTCATCAGAAAGCTGCGCG 733
BSNT_00097___ 734 GACCTAATGGATGTCCGTGGGATAAAAAGCAGACGCATCAGTCATTAAAG 783
||||..|.||.||.||.|||||...|||.||.||.|||.||||..|.||.
BL00512___yab 734 GACCGGACGGTTGCCCTTGGGACCGAAAACAAACCCATGAGTCGCTCAAA 783
BSNT_00097___ 784 CAGTACATGATTGAAGAATGTTATGAGCTTCTCGAAGCTATTGACGAAGA 833
.|||||.|.||.||.|||||.||||||.|.||.||.||.|||||.|||||
BL00512___yab 784 AAGTACTTAATCGAGGAATGCTATGAGGTGCTAGAGGCGATTGATGAAGA 833
BSNT_00097___ 834 AGACACAGACCATATGATCGAAGAGCTTGGTGACGTTTTGCTTC-AGGTC 882
|||..|.|||||..|..|.||.||||||||.||.||..||||.| ||.||
BL00512___yab 834 AGATCCCGACCACTTAGTAGAGGAGCTTGGCGATGTGATGCTCCAAGTTC 883
BSNT_00097___ 883 TTGCTTCACGCGCAAATTGGTGAAGATGAAGGTTATTTCACAATTGATGA 932
|| ||.||.|||||.||.||.||.|||||.||...|||.||||||||.||
BL00512___yab 884 TT-CTGCATGCGCAGATCGGCGAGGATGACGGCCTTTTTACAATTGACGA 932
BSNT_00097___ 933 TGTCATAAAAGGAATCAGTGAAAAAATGGTCCGAAGACATCCCCATGTGT 982
|||.||....||.||||..|.|||||||.||.||||.|||||.||.||.|
BL00512___yab 933 TGTGATTCGCGGCATCACCGCAAAAATGATCAGAAGGCATCCGCACGTCT 982
BSNT_00097___ 983 TTAAAGATGTTAAGGTTCAGGATGAAAACGATGTTTTGGCCAATTGGGAA 1032
|...|||.||....||||..|||||...|||.||..|||..||.||||||
BL00512___yab 983 TCGGAGAGGTCTCTGTTCGTGATGAGGCCGACGTCATGGTAAACTGGGAA 1032
BSNT_00097___ 1033 GATATAAAAAAG--GCCGAAAAAA-------ATACATCTGAATCATCGTT 1073
||.||.||.||| |..||||.|| |||.||| |.||
BL00512___yab 1033 GAGATCAAGAAGCAGGAGAAACAAGCGGACGATAAATC-----CCTC--- 1074
BSNT_00097___ 1074 ACTAGACAGCGTACCGAAAACC-CTTCCAGCTCTTTCGAAAGCTGCTAAA 1122
||.|||....|.|| |||.|| |||||.|||.|.||.|||||....||.
BL00512___yab 1075 -CTCGACGATATTCC-AAAGCCGCTTCCTGCTTTGTCAAAAGCGAACAAG 1122
BSNT_00097___ 1123 TTGCAGAAAAAAGCAGCGAAGGTCGGTTTTGACTGG--GAAGACGT-CAG 1169
.|.||||||||.||.||.|||..|||.||.|||||| || |.|| |||
BL00512___yab 1123 CTTCAGAAAAAGGCGGCAAAGACCGGGTTCGACTGGTCGA--ATGTCCAG 1170
BSNT_00097___ 1170 CGATATTTGGGAAAAGGTAAGT----GAGGAAATGAAGGAGTTTTCTTCT 1215
|||||||||||.| |||| |||||||||||.||.||||||||.
BL00512___yab 1171 -GATATTTGGGATA----AAGTCCAGGAGGAAATGAAAGAATTTTCTTCA 1215
BSNT_00097___ 1216 GAGGTTTCTGAAGCTCCTCACGAAC---------ACAATCTTAAAGCTGA 1256
||..||||.||||| ||||| |.||..|.||||..||
BL00512___yab 1216 GAAATTTCCGAAGC------CGAACAGCACAGCAAAAAAATGAAAGAAGA 1259
BSNT_00097___ 1257 GTTTGGCGACATTTTGTTCGCGCTGGTGAATGTAGCCCGCTTCTACAAAA 1306
|||.||||||.||||.||||||||.||.|||.|.|.|||.||.||.||||
BL00512___yab 1260 GTTCGGCGACCTTTTATTCGCGCTCGTCAATATCGGCCGGTTTTATAAAA 1309
BSNT_00097___ 1307 TAGAGCCAGAGGAAGCGCTGGCCATGACTAATGACAAATTCCGGAGACGG 1356
|.||.||.||.|||||.||.||.|||||.||.|.|||.||....|||.||
BL00512___yab 1310 TTGAACCGGAAGAAGCCCTCGCGATGACAAACGCCAAGTTTTACAGAAGG 1359
BSNT_00097___ 1357 TTCTCGTACATTGAGGAAACAGCGAAG-GAAGAGGG--AGTCGAGTTGGC 1403
|||.|.||.|||||..||.|.||.||| |.| .||| || ||..|||.
BL00512___yab 1360 TTCACATATATTGAACAATCTGCAAAGCGCA-TGGGCAAG--GATCTGGA 1406
BSNT_00097___ 1404 TGATATGTCCCTTGAGGACATGGACAAACTGTGGAATGAAGCAAAAGAAA 1453
...||||.|.|||||.||.||||||.||||||||||||||||.||||..|
BL00512___yab 1407 AAGTATGACGCTTGAAGAAATGGACGAACTGTGGAATGAAGCGAAAGGCA 1456
BSNT_00097___ 1454 CTGAGAGGAGATCATAG 1470
.|||.|||||.|.|
BL00512___yab 1457 TTGAAAGGAGCTGA--- 1470
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