Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00098 and BL00511

See Amino acid alignment / Visit BSNT_00098 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence dna-align/BSNT_00098___yabO.1.5803.seq
#    -bsequence dna-align/BL00511___yabO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00098___yabO-BL00511___yabO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00098___yabO-BL00511___yabO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00098___yabO
# 2: BL00511___yabO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     201/264 (76.1%)
# Similarity:   201/264 (76.1%)
# Gaps:           3/264 ( 1.1%)
# Score: 754.0
# 
#
#=======================================

BSNT_00098___      1 ATGAGATTAGATAAATTTTTGAAGGTATCACGGCTGATCAAACGGCGTAC     50
                     ||||||.|.||.||||||.|.||.||||||.|||||||.|||.|.||.||
BL00511___yab      1 ATGAGACTCGACAAATTTCTCAAAGTATCAAGGCTGATTAAAAGACGGAC     50

BSNT_00098___     51 ACTAGCGAAGGAAGTAGCTGACCAAGGACGAATCTCTATTAACGGAAACC    100
                     .||.||.||.|||||.||||||||.|||.||||.||.||.||.||..|.|
BL00511___yab     51 GCTTGCAAAAGAAGTGGCTGACCAGGGAAGAATTTCGATCAATGGCCAGC    100

BSNT_00098___    101 AAGCTAAAGCTAGCTCTGACGTAAAACCGGGAGATGAACTAACGGTCCGC    150
                     |.||.|||||.|||||||..||.|||.||||.||.||.||..||||.||.
BL00511___yab    101 AGGCCAAAGCAAGCTCTGTTGTCAAAGCGGGGGACGAGCTTGCGGTGCGT    150

BSNT_00098___    151 TTCGGCCAAAAGCTTGTAACGGTTCAAGTTAATGAATTGAAAGACACGAC    200
                     |||||||||||.||||||||.||..||||.|||||||||||.||.|||||
BL00511___yab    151 TTCGGCCAAAAACTTGTAACCGTCAAAGTCAATGAATTGAAGGATACGAC    200

BSNT_00098___    201 GAAAAAAGAAGAAGCTGCAAACATGTACACGATTCTAAAAGAAGAAAAAC    250
                     .||||||||||||||.||..|.|||||.||..||||.|||||.||.||.|
BL00511___yab    201 AAAAAAAGAAGAAGCCGCTGATATGTATACCGTTCTCAAAGAGGAGAAGC    250

BSNT_00098___    251 T---CGGCGAATAG    261
                     |   .||.||||||
BL00511___yab    251 TGGGAGGAGAATAG    264


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