Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00100 and BL00510

See Amino acid alignment / Visit BSNT_00100 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:46
# Commandline: needle
#    -asequence dna-align/BSNT_00100___yabP.1.5803.seq
#    -bsequence dna-align/BL00510___yabP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00100___yabP-BL00510___yabP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00100___yabP-BL00510___yabP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00100___yabP
# 2: BL00510___yabP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 314
# Identity:     240/314 (76.4%)
# Similarity:   240/314 (76.4%)
# Gaps:          16/314 ( 5.1%)
# Score: 922.0
# 
#
#=======================================

BSNT_00100___      1 ATGAATTCATATTATGATCA--AAAAGGTTCTT---------CGTCTGTT     39
                     ||||||..||||||||||||  |.||  ..|||         |.||||.|
BL00510___yab      1 ATGAATGTATATTATGATCAGCACAA--CCCTTCCGGCGGGGCATCTGGT     48

BSNT_00100___     40 CCGGAACAGCATGATGTGACAATGAAAGGCCGGAAGCATTTAGATATTTC     89
                     ||.|||   |||.|||||||.|||||.|||||.||||.|.|.|||||.||
BL00510___yab     49 CCTGAA---CATAATGTGACGATGAAGGGCCGCAAGCTTCTGGATATATC     95

BSNT_00100___     90 TGGGGTTAAGCATGTGGAGAGTTTTGATAACGAAGAATTCCTGCTGGAAA    139
                     .||.||.|||||.||.|||||.|||||.|||||.|||||..|.||.||.|
BL00510___yab     96 CGGTGTCAAGCAGGTCGAGAGCTTTGACAACGAGGAATTTTTACTTGAGA    145

BSNT_00100___    140 CGGTGATGGGAATGCTCTCCGTCAGAGGCCAAAACCTGCAGATGAAAAAT    189
                     ||||.|||||.|||||..|.|||||||||.||||||||||||||||.|||
BL00510___yab    146 CGGTAATGGGCATGCTTGCAGTCAGAGGCGAAAACCTGCAGATGAAGAAT    195

BSNT_00100___    190 CTTGATGTGGAAAAAGGGATTGTTTCGATTAAAGGCAGGGTATTTGATTT    239
                     ||.||||||||||||||..||||.||.||.||.||.||.||..|||||.|
BL00510___yab    196 CTCGATGTGGAAAAAGGCGTTGTCTCCATCAAGGGAAGAGTGCTTGATCT    245

BSNT_00100___    240 AGTGTACTTAGACGAACAACAAGGGGATAAAGCTAAAGGGTTTTTTAGCA    289
                     .||.||.||.||.||.||.||.|||||.|||||||||||.||||||||||
BL00510___yab    246 CGTCTATTTGGATGAGCAGCAGGGGGAGAAAGCTAAAGGATTTTTTAGCA    295

BSNT_00100___    290 AGTTGTTTAAATGA    303
                     ||||||||||||||
BL00510___yab    296 AGTTGTTTAAATGA    309


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