Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00104 and BL00507
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:47
# Commandline: needle
# -asequence dna-align/BSNT_00104___yabR.1.5803.seq
# -bsequence dna-align/BL00507___yabR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00104___yabR-BL00507___yabR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00104___yabR-BL00507___yabR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00104___yabR
# 2: BL00507___yabR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 334/399 (83.7%)
# Similarity: 334/399 (83.7%)
# Gaps: 12/399 ( 3.0%)
# Score: 1442.5
#
#
#=======================================
BSNT_00104___ 1 ATGTCGATTGAAGTTGGCAGCAAGTTGCAAGGGAAAATTACAGGTATTAC 50
||||||||||||||||||||||||||||||||||||.|.|||||||||||
BL00507___yab 1 ATGTCGATTGAAGTTGGCAGCAAGTTGCAAGGGAAAGTAACAGGTATTAC 50
BSNT_00104___ 51 AAATTTTGGAGCATTTGTTGAATTGCCTGGAGGCTCAACCGGTCTCGTTC 100
||||||.|||||.|||||||||.||||||||||.|||||.|||||.||||
BL00507___yab 51 AAATTTCGGAGCGTTTGTTGAACTGCCTGGAGGATCAACAGGTCTTGTTC 100
BSNT_00104___ 101 ACATTAGTGAGGTAGCTGATAATTATGTCAAAGACATTAACGACCACTTA 150
|.||.||.||.|||||.|||||.||.||.||.||||||||.||.||..|.
BL00507___yab 101 ATATCAGCGAAGTAGCCGATAACTACGTGAAGGACATTAATGATCATCTG 150
BSNT_00104___ 151 AAAGTCGGCGACCAAGTTGAAGTGAAAGTCATCAACGTTGAAAAAGACGG 200
||.|||||.||.|||||.|||||.|||||.||.||.|||||.|||||.||
BL00507___yab 151 AAGGTCGGTGATCAAGTAGAAGTTAAAGTTATTAATGTTGAGAAAGATGG 200
BSNT_00104___ 201 GAAAATTGGTTTATCTATTAAAAAAGCTAAAGACCGTCCGCAA------- 243
||||||.||.|||||.||.|||||.|||..|||||||||.|||
BL00507___yab 201 GAAAATCGGCTTATCGATCAAAAAGGCTGTAGACCGTCCTCAATCATCAA 250
BSNT_00104___ 244 -----GCCAGACCTAGAAATGATTTCCGTCCGAAAGAATCTTTTGAACAG 288
||.|||||||.||||||||||||..|.||||||.|.|||||||||
BL00507___yab 251 GACCTGCGAGACCTAAAAATGATTTCCGCTCTAAAGAAACGTTTGAACAG 300
BSNT_00104___ 289 AAAATGAATAAGTTTTTAAAAGACAGCGAAGATCGCTTGTCATCTTTAAA 338
||||||||||||||||||||||||||.|||||||||||.||.|||.||||
BL00507___yab 301 AAAATGAATAAGTTTTTAAAAGACAGTGAAGATCGCTTATCGTCTCTAAA 350
BSNT_00104___ 339 ACGCAATACGGAATCAAAACGTGGAGGGCGCGGAGCAAGAAGAGGATAA 387
||||||.||||||||||||||||||||||||||||||||||||||.|||
BL00507___yab 351 ACGCAACACGGAATCAAAACGTGGAGGGCGCGGAGCAAGAAGAGGTTAA 399
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