Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05274 and BL00498
See
Amino acid alignment /
Visit
BSNT_05274 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:22
# Commandline: needle
# -asequence dna-align/BSNT_05274___yvdE.1.5803.seq
# -bsequence dna-align/BL00498___yvdE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05274___yvdE-BL00498___yvdE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05274___yvdE-BL00498___yvdE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05274___yvdE
# 2: BL00498___yvdE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 959
# Identity: 750/959 (78.2%)
# Similarity: 750/959 (78.2%)
# Gaps: 16/959 ( 1.7%)
# Score: 2913.0
#
#
#=======================================
BSNT_05274___ 1 ATGGCAACATTGTCAGATGTGGCAAAAAAAGCAAATGTTTCGAAAATGAC 50
||||||||.||.||.|||||.|||||.|||||||||||.|||||||||||
BL00498___yvd 1 ATGGCAACGTTATCTGATGTAGCAAAGAAAGCAAATGTGTCGAAAATGAC 50
BSNT_05274___ 51 GGTATCACGAGTGATCAATCACCCCGAGACGGTGACAGATGAATTGAAAA 100
||||||.||.|||||||||||.||.|||||.|||||.|||||||||||||
BL00498___yvd 51 GGTATCGCGGGTGATCAATCATCCTGAGACTGTGACGGATGAATTGAAAA 100
BSNT_05274___ 101 AGCTTGTTCATTCTGCGATGAAAGAGCTGAATTACATCCCTAATTATGCG 150
|||||||||||||.||.|||||.|||||.|||||.||.||.||.|||||.
BL00498___yvd 101 AGCTTGTTCATTCCGCAATGAAGGAGCTCAATTATATACCGAACTATGCA 150
BSNT_05274___ 151 GCGAGAGCGCTCGTGCAAAACAGAACACAGGTTGTGAAACTATTGATACT 200
||.|||||||||||.|||||||||||||||||.||.||.||..|.|||||
BL00498___yvd 151 GCAAGAGCGCTCGTTCAAAACAGAACACAGGTCGTCAAGCTGCTCATACT 200
BSNT_05274___ 201 TGAGGAAATGGATACGACAGAACCATATTACATGAACCTGCTGACAGGAA 250
.||.|||||||||||.||||||||.|||||.|||||.|||.|.||.||||
BL00498___yvd 201 GGAAGAAATGGATACAACAGAACCTTATTATATGAATCTGTTAACGGGAA 250
BSNT_05274___ 251 TCAGCAGGGAGCTGGATCGCAATCACTATGCTCTCCAGCTTGTGACAAGA 300
|||||.|.||||||||.||..||||.||||||.|.||||||||.|||||.
BL00498___yvd 251 TCAGCCGCGAGCTGGACCGTCATCATTATGCTTTGCAGCTTGTCACAAGG 300
BSNT_05274___ 301 AATTCTCTTAATATTGGCCAATGTGACGGCATTATTGCCACCGGCTTGAG 350
||.|||||.|||||.|||||.||.||||||||||||||.||.||.|||||
BL00498___yvd 301 AAATCTCTCAATATCGGCCAGTGCGACGGCATTATTGCGACGGGGTTGAG 350
BSNT_05274___ 351 AAAGAACGATTTTGAAGGTGTAATAAAAGCGTTTGAGAAGCCGCTCGTCG 400
|||...||||||||||||..|.||.||.|..|||||.|||||..||||.|
BL00498___yvd 351 AAAAGCCGATTTTGAAGGGCTCATCAAGGTTTTTGAAAAGCCTGTCGTTG 400
BSNT_05274___ 401 TATTTGGGCAAAATGAAATGGGCTATGACTTTATCGATGTGAATAACGAG 450
||||.||||||||||||||||||||.||.|||||.|||||.||.||.||.
BL00498___yvd 401 TATTCGGGCAAAATGAAATGGGCTACGATTTTATTGATGTTAACAATGAA 450
BSNT_05274___ 451 AAAGGCACTTTTATGGCAACCCGCCATGTTATGGGGCTGGGGGAGCGGGA 500
|||||.||.|.|||||||||.||.||.||.||.||.|||||.|..||..|
BL00498___yvd 451 AAAGGAACCTATATGGCAACACGTCACGTCATTGGTCTGGGCGTCCGCAA 500
BSNT_05274___ 501 AGTTGTCTTTTTTGGCATTGATTTAGATGAGCCTTTCGAACGTGCAAGAG 550
.||.|||||||||||.||.|||||.||||||||.||.|||||..||||.|
BL00498___yvd 501 TGTCGTCTTTTTTGGGATCGATTTGGATGAGCCCTTTGAACGGTCAAGGG 550
BSNT_05274___ 551 AACAGGGGTATATACGGGCGATGAATAAAAG-----CTTTAAAAA--ATC 593
||.|.||.||..|.|.||||||| .||| ||..||||| |.|
BL00498___yvd 551 AAAAAGGCTACCTTCAGGCGATG----GAAGGCAGTCTGAAAAAAGCAGC 596
BSNT_05274___ 594 GAATGTGTTTCGGATCGACAACAGTTCTAAGAAAAGTGAATGC-CTTGCA 642
|| |.||.|||||.||.||||||||.||.||||||||| || |..||.
BL00498___yvd 597 GA---TTTTCCGGATGGAAAACAGTTCAAAAAAAAGTGAA-GCACGCGCG 642
BSNT_05274___ 643 AGAGAACTGCTGAAATCCATGGACAATCAGGCCGCATTTGTCTGCGCATC 692
.|.|||.||||...||||.|.|||...|..||.||..||||.|||||.||
BL00498___yvd 643 CGGGAAGTGCTTGCATCCTTTGACGCACCTGCAGCGGTTGTTTGCGCTTC 692
BSNT_05274___ 693 TGATCGAATCGCGCTCGGCGTCATTCGTGCGGCGCAATCCCTTGGAAAGC 742
.||.||||||||||||||.||.||.||.||||.||||||.|||||.||..
BL00498___yvd 693 GGACCGAATCGCGCTCGGGGTTATCCGCGCGGTGCAATCGCTTGGTAAAA 742
BSNT_05274___ 743 GAATTCCAGAAGACGTTGCGGTTACCGGGAATGACGGTGTGTTTCTTGAC 792
|||||||.|||||.||.|||||.|||||..|||||||.||||||||.|||
BL00498___yvd 743 GAATTCCGGAAGATGTCGCGGTCACCGGCTATGACGGGGTGTTTCTCGAC 792
BSNT_05274___ 793 CGCATCTCCTCGCCGCGCTTGACTACGGTCAGACAGCCTGTTGTTGAAAT 842
||.|||.|.|||||.|||.||||.||.|||||||||||||||||||||||
BL00498___yvd 793 CGGATCGCTTCGCCTCGCCTGACAACCGTCAGACAGCCTGTTGTTGAAAT 842
BSNT_05274___ 843 GGGGGAAGCCTGTGCGAAAATGTTACTGAAAAAAATGAATGAAGACGGTG 892
|||.||.||.||.||||.|||..|.|||||||||||.|||||||||||.|
BL00498___yvd 843 GGGAGAGGCTTGCGCGAGAATCCTGCTGAAAAAAATCAATGAAGACGGAG 892
BSNT_05274___ 893 CTGCACAAGGAAGCCTATTTTTTGAACCAGAGTTAATTGTTCGAGAATCA 942
|..|.|||||.|..|.|||||||||.||.|||.|.|||||.||.|||||.
BL00498___yvd 893 CGCCGCAAGGCAATCAATTTTTTGAGCCGGAGCTTATTGTCCGCGAATCG 942
BSNT_05274___ 943 ACGCTGTAA 951
||..||||.
BL00498___yvd 943 ACTTTGTAG 951
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.