Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05270 and BL00496
See
Amino acid alignment /
Visit
BSNT_05270 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:22
# Commandline: needle
# -asequence dna-align/BSNT_05270___yvdG.1.5803.seq
# -bsequence dna-align/BL00496___mdxE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05270___yvdG-BL00496___mdxE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05270___yvdG-BL00496___mdxE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05270___yvdG
# 2: BL00496___mdxE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1271
# Identity: 998/1271 (78.5%)
# Similarity: 998/1271 (78.5%)
# Gaps: 34/1271 ( 2.7%)
# Score: 3846.0
#
#
#=======================================
BSNT_05270___ 1 ATGGTTCTTTTAAAAAAGGGA--TTCGCCATATTG--GC-GGCATCATTC 45
|||...|.|||||||||.||| || ||.|| || |||.|||.|.
BL00496___mdx 1 ATGCAACATTTAAAAAAAGGAATTT-----TAGTGCTGCTGGCGTCAGTT 45
BSNT_05270___ 46 CTGGCAATCGGCCTTGCCGCCTGCCAAAGTTCAAA--AAATCCAGCAAGC 93
|||....||||.|||||||||||...||||||||| ||| |.|.|.||
BL00496___mdx 46 CTGCTGTTCGGTCTTGCCGCCTGTTCAAGTTCAAAGGAAA--CGGGAGGC 93
BSNT_05270___ 94 -GCTGATGGCAAAAAGGTGCTGACTGTGTCTATCGAAGAAACGTATAAAG 142
|| |..||.|||||.||||||||.||||||.|.|||||....||||||.
BL00496___mdx 94 AGC-GGCGGGAAAAAAGTGCTGACCGTGTCTGTAGAAGAGGTCTATAAAC 142
BSNT_05270___ 143 AATACATTGAAAGCATAAAAACAAAG--TTCGAAAAAGAGAATGATGTCA 190
..|||.|.|||||||| |||..||| ||.|||||||||||||||||.|
BL00496___mdx 143 CTTACGTCGAAAGCAT--AAAGGAAGGTTTTGAAAAAGAGAATGATGTGA 190
BSNT_05270___ 191 CAGTAAAAATTGTTGAAAAGCAAATGTTCGAACAGTTAGAAGCGCTTCCT 240
||||.|||||.||||||||||..||||||||.|||.|.|||||||||||.
BL00496___mdx 191 CAGTCAAAATCGTTGAAAAGCCGATGTTCGACCAGCTTGAAGCGCTTCCG 240
BSNT_05270___ 241 CTTGATGGCCCGGCGGGTAATGCGCCTGATGTTATGCTTGCTGCATATGA 290
|||||.||.|||||.||.||||||||.|||||.||||||||.|||||.||
BL00496___mdx 241 CTTGACGGTCCGGCAGGCAATGCGCCCGATGTCATGCTTGCGGCATACGA 290
BSNT_05270___ 291 CCGGATCGGCGGTTTGGGACAGCAAGGACATTTGCTTGACATTAAGCCAT 340
|||.||||||||.||.|||||||||||.||||||||.||..|.||.||.|
BL00496___mdx 291 CCGTATCGGCGGCTTAGGACAGCAAGGTCATTTGCTGGAAGTCAAACCGT 340
BSNT_05270___ 341 CTCATACAAAAAGCTTTGGTGATAAAGAAATGCAGCAGGTGACAGTTGAC 390
||.|.|||||||||||.||.||.||||||||||||||||||||.||||.|
BL00496___mdx 341 CTGACACAAAAAGCTTCGGAGACAAAGAAATGCAGCAGGTGACGGTTGGC 390
BSNT_05270___ 391 GGCAAAGTGTACGGAATGCCGCTAGTCATTGAGACACTTATTTTGTATTA 440
||.|||||.||.|||||.|||||.||.|||||.||.||..|..|.|||||
BL00496___mdx 391 GGAAAAGTCTATGGAATCCCGCTTGTTATTGAAACTCTCGTACTCTATTA 440
BSNT_05270___ 441 CAACAAAGATCTCTTAAAGACAGCGCCAAAAACATTTAAAGACCTTGAAA 490
|||||||||.||.|||||.||..||||||||||.|||||.||.||.||..
BL00496___mdx 441 CAACAAAGACCTGTTAAAAACGCCGCCAAAAACTTTTAACGAGCTCGAGG 490
BSNT_05270___ 491 AATTAACAGAGGATCCTCGA--TTCGCGTTTGCTTCGGAAAAAGGAAAAT 538
|.||||||.|.|| |..|| |||||.|||.||||||||||||||||||
BL00496___mdx 491 ATTTAACAAAAGA--CAAGAGGTTCGCTTTTTCTTCGGAAAAAGGAAAAT 538
BSNT_05270___ 539 CAACCGGATTTTTAGCAAAATGGACTGACTTTTATATGTCGTACGGCTTA 588
|.||||..|||.|.|||||||||||.||||||||.|||||.|||||.|||
BL00496___mdx 539 CGACCGCCTTTCTTGCAAAATGGACGGACTTTTACATGTCATACGGTTTA 588
BSNT_05270___ 589 TTGGCTGGATACGGCGGATATGTATTTGGAAAAAACGGCACAGATTCCGG 638
.||||.||||||||||||||||||||.|||....|||||||.||||||||
BL00496___mdx 589 ATGGCCGGATACGGCGGATATGTATTCGGAGCTGACGGCACGGATTCCGG 638
BSNT_05270___ 639 GGACATCGGCCTGAACAACAAAGGGGCTGTAGAAGCGGTGAAATATGCGG 688
.||||||||.|||||||||||.||.||.|||||.||||||.||||.||.|
BL00496___mdx 639 AGACATCGGTCTGAACAACAAGGGAGCCGTAGAGGCGGTGGAATACGCCG 688
BSNT_05270___ 689 AGAAATGGTTTA---AAACCTATTGGCCGAAAGGGATGCAAGACAATTCA 735
|.|||||||||| || ||||||||||||||.|||||.||||||.|.
BL00496___mdx 689 AAAAATGGTTTAGTGAA---TATTGGCCGAAAGGCATGCAGGACAATACG 735
BSNT_05270___ 736 AACGCAGACGACTTTATTCAGCAGATGTTTTTAGAAGGCAAAGCGGCTGC 785
|.|||||||||.|||||.|||||||..|||.|.||.||.|||||.||.||
BL00496___mdx 736 AGCGCAGACGATTTTATCCAGCAGACCTTTATGGACGGAAAAGCAGCGGC 785
BSNT_05270___ 786 GATCATTGGCGGTCCTTGGTCAGCTGCCAACTATAAAGAGGCTAAATTGA 835
..|.||.||.|||||||||||.|||.||||.||||||||.||....||||
BL00496___mdx 786 TGTTATCGGAGGTCCTTGGTCGGCTTCCAATTATAAAGAAGCCGGTTTGA 835
BSNT_05270___ 836 ACTACGGAGCGGCTCCCATTCCGACATTGCCAAATGGAGAAGAATACGCT 885
|||||||.||.||....||.|||||||||||.||.|||.||||.||.||.
BL00496___mdx 836 ACTACGGCGCAGCGAAAATCCCGACATTGCCGAACGGAAAAGAGTATGCC 885
BSNT_05270___ 886 CCTTTTGCCGGCGGGAAGGGCTGGGTAGCTTCAAAATATACAAAAGAGCC 935
||.|||||.|||||.||.||||||||.||.|||||||||||.||||||||
BL00496___mdx 886 CCGTTTGCAGGCGGAAAAGGCTGGGTCGCCTCAAAATATACGAAAGAGCC 935
BSNT_05270___ 936 CGAGCTGGCTGAAAAATGGCTTGAGTATGCCGCAAATGATGCCAATGCTT 985
.|||||.|||||.|||||||||.|.||||||||||||||.|..||.||||
BL00496___mdx 936 GGAGCTTGCTGAGAAATGGCTTCAATATGCCGCAAATGACGAAAACGCTT 985
BSNT_05270___ 986 A-CGCTTTTTATGAGGATACAAACGAAGTTCCAGCTAACACT-GCTGCAA 1033
| ||| ||||||||.|||||.|||||||||||.||.||| || |||||..
BL00496___mdx 986 ACCGC-TTTTATGAAGATACGAACGAAGTTCCGGCCAAC-CTCGCTGCTC 1033
BSNT_05270___ 1034 GGAAGAAAGCCGATGAGCAAAAGAATGAACTGACGTCAGCTGTGATTAAA 1083
|.||||||||.|..||||||||.|..||.||||||||.||.||.||.|.|
BL00496___mdx 1034 GAAAGAAAGCAGGGGAGCAAAAAAGCGAGCTGACGTCGGCGGTCATCACA 1083
BSNT_05270___ 1084 CAATATGAAACAGCAACGCCGACTCCAAATATTCCGGAAATGGCTGAAGT 1133
|||||.|||||.||.||.||.|||||.|||||||||||||||||.|||||
BL00496___mdx 1084 CAATACGAAACGGCGACTCCAACTCCGAATATTCCGGAAATGGCCGAAGT 1133
BSNT_05270___ 1134 ATGGACAGGAGCGGAAAGTTTAATTTTTGATGCAGCTTCAGGAAAAAAAT 1183
.||||||||.||.|||||.||.||.|||||.||.||..||||.|||||||
BL00496___mdx 1134 GTGGACAGGTGCAGAAAGCTTGATATTTGACGCGGCAGCAGGGAAAAAAT 1183
BSNT_05270___ 1184 CGACACAAACATCAGCGAATGATGCTGTAAACGTCATAAAGGAAAATATT 1233
||.|.||...|||||||.|||||||.||...|||.||.||.|||||.|||
BL00496___mdx 1184 CGGCTCAGCAATCAGCGGATGATGCCGTGCGCGTGATCAAAGAAAACATT 1233
BSNT_05270___ 1234 AAAGAAAAGTATGTGAAATAA 1254
|||||||||||||||||||||
BL00496___mdx 1234 AAAGAAAAGTATGTGAAATAA 1254
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.