Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05268 and BL00495
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:22
# Commandline: needle
# -asequence dna-align/BSNT_05268___yvdH.1.5803.seq
# -bsequence dna-align/BL00495___mdxF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05268___yvdH-BL00495___mdxF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05268___yvdH-BL00495___mdxF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05268___yvdH
# 2: BL00495___mdxF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1320
# Identity: 1062/1320 (80.5%)
# Similarity: 1062/1320 (80.5%)
# Gaps: 21/1320 ( 1.6%)
# Score: 4256.5
#
#
#=======================================
BSNT_05268___ 1 ATGAATAAACATCACACACTTGCAAAGCAAAAACGAAAGGCAGGGCTTTT 50
|||||.|||.|.||.|||||.|||||.|..|..||.|||||||.|||.||
BL00495___mdx 1 ATGAACAAAGACCAAACACTAGCAAACCGGAGCCGGAAGGCAGCGCTGTT 50
BSNT_05268___ 51 ATCGATCATTCCAGGACTTGGGCAGATTGCGAATCAGCAATTGTCAAAGG 100
||||||.|||||.||...|||.||||||||.||.|.|||.||.|||||||
BL00495___mdx 51 ATCGATAATTCCCGGTGCTGGCCAGATTGCAAACCGGCAGTTTTCAAAGG 100
BSNT_05268___ 101 GGCTCTTATTTCTAGCCATCACAGGCTTGTTTGCTTTTGAATTATGCG-T 149
||.||.|.|||||||.||||||||||||||||..||.|||.||| ||| |
BL00495___mdx 101 GGATCCTTTTTCTAGTCATCACAGGCTTGTTTATTTGTGAGTTA-GCGAT 149
BSNT_05268___ 150 TTTCGGTATA-CAGGCGCTAAGCGGATTGATGACATTGGGAAGTGTTCCC 198
||||||| || ||||||||.|.|||..|..||||..||||.|.|||.|||
BL00495___mdx 150 TTTCGGT-TATCAGGCGCTGATCGGTCTCGTGACGCTGGGGACTGTCCCC 198
BSNT_05268___ 199 GGTGAAGATCACTCGCTGTTTATGCTGATTGAAGGCACGCTGCAATTGAT 248
||.|||||.||||||||||||.|..||||.||.|||||||||||||||||
BL00495___mdx 199 GGAGAAGACCACTCGCTGTTTCTCTTGATAGAGGGCACGCTGCAATTGAT 248
BSNT_05268___ 249 CGTGACGGTGATTTTCCTCATGTTCTATATCTTTAATATTCATGATTCGC 298
..|||||.|..|||||.|.|||||.||.|||||||||.|..|||||.|.|
BL00495___mdx 249 TTTGACGCTCGTTTTCTTGATGTTTTACATCTTTAATCTGTATGATGCCC 298
BSNT_05268___ 299 GTAAGACAGCCGCTATGAAAGCGGCGGGTTTGGAGGTCAATACA-----A 343
|.|||||.|||||.|||||.||||||||||||.| ||| || |
BL00495___mdx 299 GGAAGACCGCCGCGATGAAGGCGGCGGGTTTGAA----AAT-CAGCGAGA 343
BSNT_05268___ 344 CAGCCAAGGATATGATCTGTCATGCGGGCGATAAAGGGTTTCCATATCTA 393
|.||...|||.||||||.|..||||.||.||.|||||||||||.|||.||
BL00495___mdx 344 CGGCTGGGGACATGATCAGAAATGCAGGTGACAAAGGGTTTCCGTATTTA 393
BSNT_05268___ 394 TTTACACTGCCGGCATATATCATGATGGTGTTTTTTGTGATTATCTTTCC 443
|||||.||||||||||||.||||||||||| |||||||||||.|||||
BL00495___mdx 394 TTTACGCTGCCGGCATATCTCATGATGGTG---TTTGTGATTATTTTTCC 440
BSNT_05268___ 444 GGTTTTGGTGACTCTGTTTGTTGCATTAACAAACTATGATTTTTATCATA 493
|||..||||||||||||||.|.||.||.||||||||.|||||||||||||
BL00495___mdx 441 GGTGCTGGTGACTCTGTTTATCGCGTTTACAAACTACGATTTTTATCATA 490
BSNT_05268___ 494 TTCCGCCTAATCGTCTGATTGACTGGGTCGGGTTTAAAAATTTCTTAAAT 543
|||||||.||..||||.||.|||||||||||.||||||||||||.|.|||
BL00495___mdx 491 TTCCGCCAAACAGTCTCATCGACTGGGTCGGCTTTAAAAATTTCATGAAT 540
BSNT_05268___ 544 ATTTTTTTCCTTGGCTCCTATCGTGAAACATTTGTGAATGTACTGGGCTG 593
||.||||||||||||||.|||||..|||||||.|...||||.||||||||
BL00495___mdx 541 ATCTTTTTCCTTGGCTCGTATCGGCAAACATTCGCCGATGTGCTGGGCTG 590
BSNT_05268___ 594 GACGGTTATCTGGACAATCTGCGCGACAACGCTGCAAATCATTTTAGGGA 643
||||.|.||||||||.|||||.|||||.|||||||||||..||.|.||.|
BL00495___mdx 591 GACGATCATCTGGACGATCTGTGCGACGACGCTGCAAATTGTTCTCGGCA 640
BSNT_05268___ 644 TTGTGACGGCACTTTTCGTCAATCAGGATTTTATAAAAGGCAAGCGGATA 693
|.||||||||.||..|||||||||||.|.|||||.||||||||||||||.
BL00495___mdx 641 TCGTGACGGCGCTGATCGTCAATCAGAACTTTATTAAAGGCAAGCGGATG 690
BSNT_05268___ 694 TTTCGAATGATTTTCTTATTTCCATGGGCTGTTCCGGCTTTTATTACAAT 743
||.||.||.||.|||.|..||||.|||||.||||||||.||||||||.||
BL00495___mdx 691 TTCCGGATCATCTTCCTGCTTCCGTGGGCCGTTCCGGCATTTATTACGAT 740
BSNT_05268___ 744 CATGAGTTTTTCCAACATGTTTAACGA--CAGCATAGGAGCGGTGAATGC 791
.|||||.||..|||||||.||.||||| |.|| .||.|||.||||.|.
BL00495___mdx 741 TATGAGCTTCGCCAACATTTTCAACGACTCGGC--GGGCGCGATGAACGT 788
BSNT_05268___ 792 ACAGGTGATACCATTATTCAATCACCTGCCGTTTGTCGAGCTGCCTGCGA 841
.||||||||.||..|.||.||.||.||.|||||.|||||..|.||.||..
BL00495___mdx 789 CCAGGTGATCCCGCTTTTGAACCAGCTTCCGTTCGTCGACATCCCGGCTG 838
BSNT_05268___ 842 TCGCGTGGAAGACTGATCCTTTCTGGACAAAGACAGCCCTCATTATGATT 891
||||.||||||||.|||||.||||||||.|||||.||..|.||||||||.
BL00495___mdx 839 TCGCATGGAAGACCGATCCGTTCTGGACGAAGACGGCTTTGATTATGATC 888
BSNT_05268___ 892 CAGACGTGGCTCGGCTTTCCATATATATATGTCATGGTAACGGGAGTGCT 941
||||||||||||||.|||||.||.||.|||||||||||.|||||.|||||
BL00495___mdx 889 CAGACGTGGCTCGGTTTTCCCTACATTTATGTCATGGTGACGGGGGTGCT 938
BSNT_05268___ 942 TCAGGCGATTCCAGGTGAATTGTATGAAGCGGCAAAGATTGACGGGGCCA 991
||||||||||||.||.||..|.|||||||||||||||||||||||.||.|
BL00495___mdx 939 TCAGGCGATTCCCGGAGAGCTTTATGAAGCGGCAAAGATTGACGGCGCGA 988
BSNT_05268___ 992 CTTTTATTCAGCGTTTTCGGCATATTACATTCCCGATGATTTTATTTGCC 1041
|.|||||||||||.|||...||.|||||..|.|||||||||||||||||.
BL00495___mdx 989 CATTTATTCAGCGCTTTAAACACATTACGCTGCCGATGATTTTATTTGCG 1038
BSNT_05268___ 1042 ACAGCACCCGTGATGATTACTCAGTATACGTTTAATTTCAATAATTTCTC 1091
||.|||||.|||||||||||.||||||||.||||||||||||||.|||||
BL00495___mdx 1039 ACCGCACCGGTGATGATTACCCAGTATACATTTAATTTCAATAACTTCTC 1088
BSNT_05268___ 1092 GATCATCTATTTATTTAATGAGGGAGGGCCAGGCAGTGCGGGAGCCGGGG 1141
|||||||||||||||||||||.||.||.||.||.||||||||.|||||.|
BL00495___mdx 1089 GATCATCTATTTATTTAATGAAGGCGGTCCGGGGAGTGCGGGGGCCGGAG 1138
BSNT_05268___ 1142 CCGGATCGACCGATATCTTAATTTCGTGGATTTATAAACTGACAACAGGC 1191
||||.||.|||||.||||||||.||.|||||.|||||.|||||.||.||.
BL00495___mdx 1139 CCGGGTCAACCGACATCTTAATATCCTGGATCTATAAGCTGACGACGGGG 1188
BSNT_05268___ 1192 ACATCACCCCAATATTCCGTTGCGGCGGCTGTGACACTGTTAATTTCTTT 1241
||.||.||.||.||||||||.|||||.|||||.||||||.|.||||||||
BL00495___mdx 1189 ACGTCGCCGCAGTATTCCGTGGCGGCTGCTGTCACACTGCTCATTTCTTT 1238
BSNT_05268___ 1242 CATTGTCATTGGAATTTCACTGATTGCTTTCAAAAAATCGAATGCTTTTG 1291
|||||||||.||..||||.|||||||||||.||.|||||||||||.||||
BL00495___mdx 1239 CATTGTCATCGGGGTTTCCCTGATTGCTTTTAAGAAATCGAATGCCTTTG 1288
BSNT_05268___ 1292 GCAATGAGGAGGTTATGTAG 1311
|||||||||||||.||||||
BL00495___mdx 1289 GCAATGAGGAGGTCATGTAG 1308
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