Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05263 and BL00492
See
Amino acid alignment /
Visit
BSNT_05263 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence dna-align/BSNT_05263___yvdK.1.5803.seq
# -bsequence dna-align/BL00492___yvdK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05263___yvdK-BL00492___yvdK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05263___yvdK-BL00492___yvdK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05263___yvdK
# 2: BL00492___yvdK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2321
# Identity: 1834/2321 (79.0%)
# Similarity: 1834/2321 (79.0%)
# Gaps: 85/2321 ( 3.7%)
# Score: 7255.5
#
#
#=======================================
BSNT_05263___ 1 ATGATAAATCAGCGGTTATTTGAGATTGATGAATGGAAAATCAAAACAAA 50
|||..||||||||||.||||||||||.||..|.|||||||||||||||||
BL00492___yvd 1 ATGGCAAATCAGCGGCTATTTGAGATCGACCAGTGGAAAATCAAAACAAA 50
BSNT_05263___ 51 TACATTTAATAAGGAGCGTACACGGCTGCTGGAAAGCCTGACGTCTCTT- 99
.|.||||.|.|||||.|.||.||||||.|.||||||.|||||.|| |||
BL00492___yvd 51 CAAATTTGAAAAGGAACATAAACGGCTTCAGGAAAGTCTGACATC-CTTG 99
BSNT_05263___ 100 GCCAATGGCTATATGGGGGTCAGAGGGAATTTTGAAGAAGGCTATTCAGG 149
||.||.||.||||||||..||||.|||||||||||||||.||||||||||
BL00492___yvd 100 GCGAACGGATATATGGGAATCAGGGGGAATTTTGAAGAAAGCTATTCAGG 149
BSNT_05263___ 150 CGACAGTCACCAAGGCACATATATTGCAGGCGTGTGGTTCCCCGACAAAA 199
|||.||||.|.|||||||||||||.|||||.||.||||||||.|||||||
BL00492___yvd 150 CGAAAGTCTCAAAGGCACATATATCGCAGGGGTTTGGTTCCCTGACAAAA 199
BSNT_05263___ 200 CGCGAGTCGGCTGGTGGAAAAACGGGTATCCGGAATATTTCGGAAAAGTG 249
||||.||||||||||||||||||||.|||||.|||||||||||.||||||
BL00492___yvd 200 CGCGTGTCGGCTGGTGGAAAAACGGCTATCCCGAATATTTCGGGAAAGTG 249
BSNT_05263___ 250 ATCAATGCAATGAACTTTATGGGCATAGGCTTATATGTTGACGGTGAAAA 299
||||||||.|||||.||.||.||.||.|...|||||||.||||..|||||
BL00492___yvd 250 ATCAATGCGATGAATTTCATCGGAATTGATGTATATGTAGACGACGAAAA 299
BSNT_05263___ 300 AATCGATCTCCATCAAAACCCAATCAAATCATTTGAGGTAGAACTCAATA 349
|.||||.|||...||||||...|||.||||.|||||..|.||.||.||||
BL00492___yvd 300 AGTCGACCTCAGCCAAAACGACATCGAATCGTTTGAATTGGAGCTTAATA 349
BSNT_05263___ 350 TGAAAGAGGGGATTCTGCGGCGAAGCGCTGTTGTCCGCATTCAGGGTAAA 399
|||||||.||.||..|||||.||||||||||.|||| |.||.||
BL00492___yvd 350 TGAAAGAAGGCATCTTGCGGAGAAGCGCTGTCGTCC-------GTGTGAA 392
BSNT_05263___ 400 T-------CCGTCAGAATCAGGTCAGAGCGGTTTCTTAGCCTTGCTGTAA 442
| |.||||.|||...|||.|||||.|||||||||||.|.|||..
BL00492___yvd 393 TCAAAAGGCTGTCAAAATTTCGTCCGAGCGCTTTCTTAGCCTCGATGTCC 442
BSNT_05263___ 443 AAGAACTCTGTGCGATTCATTATGAAGCGGAGTGCTTGACGG--GAAATG 490
...||||.||.|||||.||||||||||||||.|||.|||..| ||| |
BL00492___yvd 443 CGCAACTGTGCGCGATCCATTATGAAGCGGAATGCCTGAGCGATGAA--G 490
BSNT_05263___ 491 CTGTCATTACGCTTGTTCCTTACCTGGATGGAAACGTGGCAAATGAAGAT 540
|.|||||.||||||||||||||.||.||||||||.||.||||||||.|||
BL00492___yvd 491 CGGTCATCACGCTTGTTCCTTATCTTGATGGAAATGTCGCAAATGAGGAT 540
BSNT_05263___ 541 TCTAACTACCAAGAACAGTTTTGGCAGGAGGAAGCGAAAGGTGCTGATTC 590
.|.||.|.|.||||.|.||||||||||||.|||||||||||.||.||.||
BL00492___yvd 541 GCCAATTTCGAAGAGCGGTTTTGGCAGGAAGAAGCGAAAGGCGCCGAATC 590
BSNT_05263___ 591 TCACAGCGGCCATTTAGCGGCAAAAACGATCGAAAATCCATTTGGAACAC 640
|||..||||||||.|.|.|.|.||||||||.||.|||||.||||||||.|
BL00492___yvd 591 TCATCGCGGCCATCTTGTGACGAAAACGATTGAGAATCCGTTTGGAACCC 640
BSNT_05263___ 641 CGCGCTTCACGGTATTAGCCGCAATG-GCAAACGAGACGGAGGGTTTTGT 689
||||.||.|||||....||..|.||| || ||.|.||||||.||.|.|||
BL00492___yvd 641 CGCGTTTTACGGTGGCTGCTTCTATGTGC-AATGTGACGGAAGGATATGT 689
BSNT_05263___ 690 CCATGAAAGC------TTTAAAACGACTGAAATGTATGTCGAGAATCGCT 733
| ||| |||.|||||..||.||||||.|..||.||.||||
BL00492___yvd 690 C------AGCGAGCATTTTCAAACGGATGCAATGTACGCGGAAAACCGCT 733
BSNT_05263___ 734 ACAGTTATCA------------AACGAAGGCATCATTGAAAAAGTTTGTG 771
||.||||..| |||.|||||.||.||.||.||.||..|.
BL00492___yvd 734 ACTGTTACGAAGTGGGACCGGGAACAAAGGCTTCTTTAAAGAAATTGATC 783
BSNT_05263___ 772 ATTGTCACGACTTCCCGTGATTTTCGGGAGGAAGAGCTTTTATCGAAAGC 821
||||||||.||.|||||.||||||...||.|.||||||||||....|.|.
BL00492___yvd 784 ATTGTCACAACGTCCCGGGATTTTGAAGAAGCAGAGCTTTTAGTACAGGG 833
BSNT_05263___ 822 CAAGGAGCTTTTGGCGGATGT-----GGTAGAGAACGGCTATGAAGATGC 866
||.||.||||||||||||||| ||.|| ||.||||||||.||
BL00492___yvd 834 CAGGGCGCTTTTGGCGGATGTTCTTCGGCAG-----GGATATGAAGAAGC 878
BSNT_05263___ 867 AAAACGGAGGCACACTGATCGATGGAAGGAAAGATGGGCAAAAGCGGACA 916
.||.||||||||.||.||.|..||||.||||||.||||||||||||||||
BL00492___yvd 879 GAAGCGGAGGCATACCGAACATTGGATGGAAAGGTGGGCAAAAGCGGACA 928
BSNT_05263___ 917 TTGAGATTAAAGGAGATGAGGAGCTTCAACAAGGAATCCGCTACAATATC 966
||||.||||||||.|||||.||||||||.||.||.|||||.|||||..||
BL00492___yvd 929 TTGAAATTAAAGGGGATGATGAGCTTCAGCAGGGCATCCGGTACAACCTC 978
BSNT_05263___ 967 TTTCAGTTATTCTCGACATATTACGGGGGCGATGCCCGTTTGAATATCGG 1016
||||||.|.|||||||||||.|||||.|.||||.|.||.||.||.|||||
BL00492___yvd 979 TTTCAGCTCTTCTCGACATACTACGGAGCCGATTCACGCTTAAACATCGG 1028
BSNT_05263___ 1017 GCCGAAAGGATTTACTGGCGAGAAATATGGAGGTGCCGCATATTGGGATA 1066
|||||||||||||||.|||||||||||.|||||.|||||.||||||||||
BL00492___yvd 1029 GCCGAAAGGATTTACCGGCGAGAAATACGGAGGAGCCGCCTATTGGGATA 1078
BSNT_05263___ 1067 CTGAGGCGTACGCCGTTCCGATGTATTTGGCGACAGCCGAGCCGGAGGTG 1116
||||||||||||||||||||||||||||||||||.||.||||||||||||
BL00492___yvd 1079 CTGAGGCGTACGCCGTTCCGATGTATTTGGCGACGGCAGAGCCGGAGGTG 1128
BSNT_05263___ 1117 ACGAAAAACCTGCTTTTGTATCGCTATCATCAGTTGGAGGCTGCCGAACG 1166
|||||.||.|||||||||||.|||||||||||.||||||||.||..||||
BL00492___yvd 1129 ACGAAGAATCTGCTTTTGTACCGCTATCATCATTTGGAGGCAGCAAAACG 1178
BSNT_05263___ 1167 AAACGCGGCAAAATTGGGGATGAAGGGGGCACTTTATCCGATGGTGACGT 1216
.||.||.||.|||.|||||.||||.||.||.||||||||||||||.||.|
BL00492___yvd 1179 GAATGCCGCCAAACTGGGGCTGAAAGGAGCCCTTTATCCGATGGTCACCT 1228
BSNT_05263___ 1217 TCACCGGTGATGAATGCCACAACGAATGGGAAATCACCTTTGAAGAAATT 1266
||||.||.||||||||||||||.||||||||.||||||||.|||||||||
BL00492___yvd 1229 TCACAGGCGATGAATGCCACAATGAATGGGAGATCACCTTCGAAGAAATT 1278
BSNT_05263___ 1267 CACCGCAATGGCGCGATCTGTTATGCGATCTACAATTATATCAATTATAC 1316
||||||||.||||||||||||||||||||||||||||||.||||||||||
BL00492___yvd 1279 CACCGCAACGGCGCGATCTGTTATGCGATCTACAATTATGTCAATTATAC 1328
BSNT_05263___ 1317 AGGCGACCGTAACTATATGGAAGAATACGGGATAGACGTACTTGTGGCAG 1366
|||||||||..||||.|||.|||||||||||||||||||.||.||.|.|.
BL00492___yvd 1329 AGGCGACCGGGACTACATGAAAGAATACGGGATAGACGTTCTCGTCGAAA 1378
BSNT_05263___ 1367 TCAGCAGATTTTGGGCCGACCGTGTTCACTTCTCGAAACGAAAAAATAAG 1416
||||||||||||||||.|||||.||.||||||||.||||||||.|||||.
BL00492___yvd 1379 TCAGCAGATTTTGGGCGGACCGCGTCCACTTCTCAAAACGAAACAATAAA 1428
BSNT_05263___ 1417 TATATGATCCATGGCGTCACAGGGCCGAATGAATACGAAAACAACGTTAA 1466
||.||||||||.|||||||||||||||||||||||.||||||||.||.||
BL00492___yvd 1429 TACATGATCCACGGCGTCACAGGGCCGAATGAATATGAAAACAATGTCAA 1478
BSNT_05263___ 1467 CAACAATTGGTATACGAATGTCATTGCGGCTTGGACGTTGGAGTATACTC 1516
||||||.|||||||||||..|.||||||.|.||||||.|.|||||.||.|
BL00492___yvd 1479 CAACAACTGGTATACGAACTTGATTGCGTCATGGACGCTTGAGTACACGC 1528
BSNT_05263___ 1517 TACAAAGTCTCGAAAGTAT-CTCAGCGGAG---AAACGCCGCCTTCTGGA 1562
|..|||..|||| .||| ||| .||||| ||||||||||..||.||
BL00492___yvd 1529 TCGAAAACCTCG---CTATCCTC-CCGGAGGAAAAACGCCGCCGGCTTGA 1574
BSNT_05263___ 1563 TGTACAGGAAGAAGAATT---GAAAGTCTGGAGAGAAATCATCCAGCACA 1609
|||||.|||||..|||.| |||| ||||..||.||||||.|||..|
BL00492___yvd 1575 TGTACGGGAAGCCGAAATCGAGAAA---TGGAAGGATATCATCGAGCGAA 1621
BSNT_05263___ 1610 TGTACTATCCGTATAGTGAAGAACTGCAAA--TTTTCGTTCAGCATGACA 1657
||||||||||.||.|||||.|||.| ||| ||||..||||||||||.|
BL00492___yvd 1622 TGTACTATCCATACAGTGAGGAATT--AAATGTTTTTATTCAGCATGATA 1669
BSNT_05263___ 1658 CGTTCTTGGATAAAGACCTGCAAGCAGTTGACGAATTAGATCCAGCGGAA 1707
|.|||.||||||||||.||.||.||||..||.||..|.||.||.|..||.
BL00492___yvd 1670 CTTTCCTGGATAAAGAGCTTCAGGCAGCGGATGAGCTTGAACCGGGTGAC 1719
BSNT_05263___ 1708 CGGCCTCTTTACCAGAATTGGTCATGGGACAAGATTCTCCGCTCCAATTT 1757
||.||.||.||.|||||.|||||||||||.||.|||||||||||||.|||
BL00492___yvd 1720 CGTCCGCTCTATCAGAACTGGTCATGGGATAAAATTCTCCGCTCCAGTTT 1769
BSNT_05263___ 1758 TATTAAGCAGGCAGATGTTCTCCAAGGCATTTATCTTTTTAATGACCGTT 1807
||||||||||||.||||||||.||||||||||||.|.||||||.||||.|
BL00492___yvd 1770 TATTAAGCAGGCTGATGTTCTGCAAGGCATTTATTTCTTTAATCACCGAT 1819
BSNT_05263___ 1808 TTACAATGGAAGAAAAACGGCGAAATTTTGAATTTTATGAGCCGATGACT 1857
|||||||||||||||||||.||.||.||||||||||||||.||||||||.
BL00492___yvd 1820 TTACAATGGAAGAAAAACGTCGCAACTTTGAATTTTATGAACCGATGACA 1869
BSNT_05263___ 1858 GTCCATGAATCAAGCCTATCGCCCTCTGTCCATGCGATTCTCGCAGCCGA 1907
||.||||||||.|||||.|||||.||||||||||||.|.||.||.||.||
BL00492___yvd 1870 GTTCATGAATCGAGCCTTTCGCCATCTGTCCATGCGGTGCTGGCGGCTGA 1919
BSNT_05263___ 1908 ACTCAAGCTGGAAAAGAAAGCGCTCGAATTATATAAGCGCACAGCAAGGC 1957
.|||||..||||||||||||||||||||.|.||||||||.|||||.||||
BL00492___yvd 1920 GCTCAAAATGGAAAAGAAAGCGCTCGAACTGTATAAGCGTACAGCGAGGC 1969
BSNT_05263___ 1958 TTGATCTTGATAATTACAATCATGATACGGAAGAA-GGCTTGCATATTAC 2006
|||||||.|||||||||||||||||.||.||.||| ||||| |||||.||
BL00492___yvd 1970 TTGATCTGGATAATTACAATCATGACACCGAGGAAGGGCTT-CATATCAC 2018
BSNT_05263___ 2007 TTCAATGACGGGTAGCTGGCTGACAATCGTTCATGGCTTTGCAGGCATGC 2056
|||.|||||.||.||||||||..|.|||||.||.||.|||||.|||||||
BL00492___yvd 2019 TTCGATGACCGGAAGCTGGCTCGCCATCGTGCAAGGATTTGCCGGCATGC 2068
BSNT_05263___ 2057 GCACCGCGAATGAGACGCTGTCATTTGCTCCGTTTTTGCCGAAAGAATGG 2106
||||...|.||||||.||||||.||||||||||||.|||||||.||||||
BL00492___yvd 2069 GCACTCAGGATGAGAAGCTGTCTTTTGCTCCGTTTCTGCCGAAGGAATGG 2118
BSNT_05263___ 2107 GACGAATATTCATTCAACATCAATTATCGAAACCGATTAATCAATGTGAC 2156
||||..|||||.||||||||||||||||||.||||..|||||||||||..
BL00492___yvd 2119 GACGGTTATTCGTTCAACATCAATTATCGAGACCGGCTAATCAATGTGCA 2168
BSNT_05263___ 2157 GGTTGACGAAAAGCGCGTTATTTTTGAG-CTTGTAAAAGGCGAGCCGCTG 2205
|||.||.|||||..||| |..||||.|| |||.|||||||.||.|||||.
BL00492___yvd 2169 GGTAGAGGAAAACAGCG-TCGTTTTCAGTCTTTTAAAAGGAGAACCGCTT 2217
BSNT_05263___ 2206 CACATGAACGTTTATGAGGAACCAG-TTGTCCTACAGGGACGATGTGAAA 2254
...||||..|||||||..||| ||| |.|..||..|.|||||.|.|||||
BL00492___yvd 2218 TCTATGACAGTTTATGGAGAA-CAGATCGCACTGAACGGACGGTATGAAA 2266
BSNT_05263___ 2255 GGA-GAACGCCTAATGAGTGA 2274
||| ||..|||..||||
BL00492___yvd 2267 GGAGGATGGCCCGATGA---- 2283
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.