Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05262 and BL00491
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence dna-align/BSNT_05262.1.5803.seq
# -bsequence dna-align/BL00491___malL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05262-BL00491___malL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05262-BL00491___malL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05262
# 2: BL00491___malL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1709
# Identity: 1008/1709 (59.0%)
# Similarity: 1008/1709 (59.0%)
# Gaps: 520/1709 (30.4%)
# Score: 4285.0
#
#
#=======================================
BSNT_05262 1 ATGAGTGAATGGTGGAAAGAAGCTGTCGTTTATCAAATTTACCCGCGCAG 50
|||||..|||||||||||||.||.|||||.|||||||||||||||||.||
BL00491___mal 1 ATGAGCCAATGGTGGAAAGAGGCAGTCGTGTATCAAATTTACCCGCGGAG 50
BSNT_05262 51 TTTTTATGATGCCAATGGAGATGGATTCGGGGATTTGCAAGGTGTGATTC 100
||||||||||.||||.|||||.||.|||||.||||||||.||.|||||||
BL00491___mal 51 TTTTTATGATTCCAACGGAGACGGCTTCGGTGATTTGCAGGGGGTGATTC 100
BSNT_05262 101 AAAAGCTGGATTACATCAAAAATCTCGGGGCGGATGTCATCTGGCTCTCC 150
|||||||.|||||||||||||..||.||.||.||||||||.|||||.|..
BL00491___mal 101 AAAAGCTCGATTACATCAAAAGCCTTGGAGCCGATGTCATATGGCTGTGT 150
BSNT_05262 151 CCGGTATTTGATTCCCCGCAGGATGACAACGGATATGATATCAGCGATTA 200
||.||.||||||||||||||||||||||||||.||.||.||||||||.||
BL00491___mal 151 CCTGTGTTTGATTCCCCGCAGGATGACAACGGCTACGACATCAGCGACTA 200
BSNT_05262 201 CAAAAACATGTATGAAAAGTTTGGGACAAATGAAGATATGTTTCAGCTGA 250
.|.||.|||.||.||||||||.|||||.||.||.|||||||||||..|||
BL00491___mal 201 TAGAAGCATATACGAAAAGTTCGGGACGAACGATGATATGTTTCAATTGA 250
BSNT_05262 251 TTGATGAAGTCCATAAACGCGGAATGAAAATCGTCATGGATTTGGTCGTG 300
||||||||||.|||||||||||||||||||||.|.||||||.|.||||||
BL00491___mal 251 TTGATGAAGTGCATAAACGCGGAATGAAAATCATTATGGATCTTGTCGTG 300
BSNT_05262 301 AACCACACATCAGATGAGCATGCTTGGTTTGCTGAAAGCCGCAAGTCGAA 350
||.|||||.||.|||||.|||||.||||||||.||||||||||||||.||
BL00491___mal 301 AATCACACGTCTGATGAACATGCCTGGTTTGCCGAAAGCCGCAAGTCAAA 350
BSNT_05262 351 GGACAATCCTTACCGGGATTATTATTTTTGGAAAGATCCTAAACCGGACG 400
|||||||||||||||.|||||||||||||||||.|||||.||..||||||
BL00491___mal 351 GGACAATCCTTACCGTGATTATTATTTTTGGAAGGATCCAAAGGCGGACG 400
BSNT_05262 401 GCTCAGAGCCGAATAATTGGGGATCGATCTTTTCAGGCTCAGCGTGGACA 450
|.|||||||||||.|||||||||||||||||||||||..|.||.|||||.
BL00491___mal 401 GTTCAGAGCCGAACAATTGGGGATCGATCTTTTCAGGGCCGGCATGGACG 450
BSNT_05262 451 TACGATGAAGGAACAGGGCAGTATTATTTGCACTACTTTTCGAAAAAACA 500
..||||||..|.|||||.|||||||||.|.|||||||||||||||||.||
BL00491___mal 451 CTCGATGAGCGGACAGGACAGTATTATCTTCACTACTTTTCGAAAAAGCA 500
BSNT_05262 501 GCCTGATTTAAATTGGGAAAACGAAGCCGTTCGCCGGGAAGTTTATAATG 550
||||||.|||||.|||||.||.|||||.||||||||.|||||.||..||.
BL00491___mal 501 GCCTGACTTAAACTGGGAGAATGAAGCGGTTCGCCGCGAAGTATACGATT 550
BSNT_05262 551 TAATGAGATTCTGGATGGATAGAGGCGTTGACGGCTGGCGGATGGATGTG 600
|.||||.|||.||||||||.||||||||.|||||||||||||||||.|||
BL00491___mal 551 TGATGACATTTTGGATGGACAGAGGCGTGGACGGCTGGCGGATGGACGTG 600
BSNT_05262 601 ATCGGTTCTATTTCTAAATACACCGATTTTCCGGACTACGAAACGGATCA 650
||||||||.||.||.||||.|..|||.|||||.||.||.|||||.|||.|
BL00491___mal 601 ATCGGTTCCATCTCCAAATTCGTCGACTTTCCCGATTATGAAACAGATGA 650
BSNT_05262 651 CAGCCG--CAGCTATATTGTCGGCCGTTATCACTCTAACGGCCCCCGTCT 698
|||||| || |||.|.||||||||.|||||.||.||||||||||||||
BL00491___mal 651 CAGCCGTCCA--TATGTCGTCGGCCGCTATCATTCGAACGGCCCCCGTCT 698
BSNT_05262 699 TCATGAGTTTATTCAAGAGATGAACAGGGAAGTGCTTTCTCATTACGACT 748
.||.||.|||||.||||||||||||.||||||||||.||.|.||||||||
BL00491___mal 699 GCACGAATTTATACAAGAGATGAACCGGGAAGTGCTGTCCCGTTACGACT 748
BSNT_05262 749 GCATGACAGTCGGAGAGGCAAACGGCTCTGACATTGAAGAGGCGAAAAAG 798
|.|||||.|||||.||.|||||||||||.||..|||||||.||||||||.
BL00491___mal 749 GTATGACGGTCGGCGAAGCAAACGGCTCAGATGTTGAAGAAGCGAAAAAA 798
BSNT_05262 799 TACACAGATGCAAGCAGGCAAGAGCTGAATATGATCTTTACATTTGAACA 848
|||||.|||.|||||||.||.||||||||.|||||.||||||||||||||
BL00491___mal 799 TACACGGATCCAAGCAGACATGAGCTGAACATGATTTTTACATTTGAACA 848
BSNT_05262 849 TATGGATATTGATACAGAACAAAACTCGCCAAATGGGAAATGGCAGATCA 898
|||||||||||||||..||||..|.||.||.|||||||||||||||||.|
BL00491___mal 849 TATGGATATTGATACCAAACAGCATTCTCCGAATGGGAAATGGCAGATGA 898
BSNT_05262 899 AGCCGTTTGATTTGATTGCTTTAAAAAAGACGATGACAAGGTGGCAGACC 948
||||||||||...|||.||||||||||||||||||||.||||||||||||
BL00491___mal 899 AGCCGTTTGACCCGATCGCTTTAAAAAAGACGATGACGAGGTGGCAGACC 948
BSNT_05262 949 GGGTTAATGAATGTCGGCTGGAATACCCTGTATTTTGAGAACCATGACCA 998
|..|||||||||||||||||||||||.||.|||||.||.||.|||||.||
BL00491___mal 949 GCTTTAATGAATGTCGGCTGGAATACGCTTTATTTCGAAAATCATGATCA 998
BSNT_05262 999 GCCGAGGGTTATTTCCCGCTGGGGCAATGACGGGAAGCTCCGTAAGGAAT 1048
|||||||||.||.||||||||||||||||||.|..|||||||.||..|||
BL00491___mal 999 GCCGAGGGTCATATCCCGCTGGGGCAATGACCGCGAGCTCCGCAAACAAT 1048
BSNT_05262 1049 GTGCGAAGGCATTTGCAACGGTTCTGCACGGCATGAAAGGAACGCCGTTT 1098
|.||.||.|||||||||||.|||||||||||||||||.|||||.|||||.
BL00491___mal 1049 GCGCCAAAGCATTTGCAACAGTTCTGCACGGCATGAAGGGAACCCCGTTC 1098
BSNT_05262 1099 ATTTACCAGGGAGAAGAAATCGGCATGGTCAACATCGATATGCCGCTGGA 1148
|||||.||.||.|||||||||||||||...||||.|||.||||||||.||
BL00491___mal 1099 ATTTATCAAGGTGAAGAAATCGGCATGACAAACAGCGAGATGCCGCTCGA 1148
BSNT_05262 1149 GATGTATGATGATCTTGAAATAAAGAATGCATA-CGTGAACTAG------ 1191
.||||||||||||||.|||||.||.||.||||| ||.|||||.|
BL00491___mal 1149 AATGTATGATGATCTCGAAATCAAAAACGCATACCGCGAACTTGTCATTG 1198
BSNT_05262 1191 -------------------------------------------------- 1191
BL00491___mal 1199 AAAACAAAACGATGACAGAGGAAGACTTTCGAAAAGCCGTGGCGAAAAAA 1248
BSNT_05262 1191 -------------------------------------------------- 1191
BL00491___mal 1249 GGGCGGGATCATGCGAGAACGCCGATGCAATGGGATGACGGGAAATACGC 1298
BSNT_05262 1191 -------------------------------------------------- 1191
BL00491___mal 1299 GGGCTTTACGGATGGAGAGCCTTGGCTGGCGGTAAATCCCCGCTATCAAG 1348
BSNT_05262 1191 -------------------------------------------------- 1191
BL00491___mal 1349 AAATCAATGTGAAAGAGTCGCTTGCCGATGAAGATTCGATTTTCTATTAT 1398
BSNT_05262 1191 -------------------------------------------------- 1191
BL00491___mal 1399 TATCAGAAGCTCATCGGGCTGCGCAAACAAAATAAAGTCATCGTGTACGG 1448
BSNT_05262 1191 -------------------------------------------------- 1191
BL00491___mal 1449 AGACTATCGGCTGCTGCTCGAGGAAGATCCGCGAATCTTTGCGTATATCC 1498
BSNT_05262 1191 -------------------------------------------------- 1191
BL00491___mal 1499 GCGAATATCGGGGCGAAAAGCTGTTAGTCGCCGTGAATTTATCAGAAGAA 1548
BSNT_05262 1191 -------------------------------------------------- 1191
BL00491___mal 1549 AAGGCGCTGTTTCATGCTTCGCCGGAATTGCTTGAGGACAGATGGGATGT 1598
BSNT_05262 1191 -------------------------------------------------- 1191
BL00491___mal 1599 GCTGTTGTCAAACTACGCCCGAGAGCGGCTTAATATAAGCGGCAGTATCG 1648
BSNT_05262 1191 -------------------------------------------------- 1191
BL00491___mal 1649 ACATGGAGCCTTATGAAGCTTTCATGATGATCAGCCGGGCAAAGGATTAC 1698
BSNT_05262 1191 --------- 1191
BL00491___mal 1699 ACATCATGA 1707
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